RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 ELP2P42935 788 aa-0.39□□□□□ -2.47
snR38snR38 ESF2P53743 316 aaKnown RBP-0.39□□□□□ -2.47
snR38snR38 MRPL51Q06090 140 aaPredicted RBP-0.39□□□□□ -2.47
snR38snR38 SWA2Q06677 668 aa-0.39□□□□□ -2.47
snR38snR38 SYO1Q07395 620 aa-0.39□□□□□ -2.47
snR38snR38 FDH1Q08911 376 aa-0.39□□□□□ -2.47
snR38snR38 NOP56Q12460 504 aaKnown RBP RIP-Chip data-0.39□□□□□ -2.47not detected
snR38snR38 ADH3P07246 375 aaKnown RBP-0.4□□□□□ -2.47
snR38snR38 VAS1P07806 1104 aaKnown RBP-0.4□□□□□ -2.47
snR38snR38 APE1P14904 514 aa-0.4□□□□□ -2.47
snR38snR38 ART10P18634 518 aaKnown RBP-0.4□□□□□ -2.47
snR38snR38 EXO70P19658 623 aa-0.4□□□□□ -2.47
snR38snR38 NPL6P32832 435 aa-0.4□□□□□ -2.47
snR38snR38 HAT2P39984 401 aa-0.4□□□□□ -2.47
snR38snR38 YIR035CP40579 254 aa-0.4□□□□□ -2.47
snR38snR38 GZF3P42944 551 aaKnown RBP-0.4□□□□□ -2.47
snR38snR38 IRC5P43610 853 aa-0.4□□□□□ -2.47
snR38snR38 POL31P46957 487 aa-0.4□□□□□ -2.47
snR38snR38 CPR7P47103 393 aa-0.4□□□□□ -2.47
snR38snR38 NNF2P53253 936 aa-0.4□□□□□ -2.47
snR38snR38 YNR071CP53757 342 aa-0.4□□□□□ -2.47
snR38snR38 YPL108WQ02872 168 aaPredicted RBP-0.4□□□□□ -2.47
snR38snR38 TRI1Q05024 226 aa-0.4□□□□□ -2.47
snR38snR38 DIC1Q06143 298 aa-0.4□□□□□ -2.47
snR38snR38 MLC2Q06580 163 aa-0.4□□□□□ -2.47
snR38snR38 AIM6Q07716 390 aa-0.4□□□□□ -2.47
snR38snR38 SDH5Q08230 162 aa-0.4□□□□□ -2.47
snR38snR38 YOR378WQ08902 515 aa-0.4□□□□□ -2.47
snR38snR38 AMD1P15274 810 aaKnown RBP-0.41□□□□□ -2.48
snR38snR38 PHO84P25297 587 aaKnown RBP-0.41□□□□□ -2.48
snR38snR38 MSH2P25847 964 aa-0.41□□□□□ -2.48
snR38snR38 HEM12P32347 362 aaPredicted RBP-0.41□□□□□ -2.48
snR38snR38 PRP19P32523 503 aaKnown RBP-0.41□□□□□ -2.48
snR38snR38 PRY2P36110 329 aa-0.41□□□□□ -2.48
snR38snR38 LAG1P38703 411 aa-0.41□□□□□ -2.48
snR38snR38 FRT2P39734 528 aa-0.41□□□□□ -2.48
snR38snR38 YER186CP40101 306 aa-0.41□□□□□ -2.48
snR38snR38 PRM5P40476 318 aa-0.41□□□□□ -2.48
snR38snR38 PIR3Q03180 325 aa-0.41□□□□□ -2.48
snR38snR38 RPN4Q03465 531 aa-0.41□□□□□ -2.48
snR38snR38 YKU80Q04437 629 aa-0.41□□□□□ -2.48
snR38snR38 MCH1Q07376 486 aa-0.41□□□□□ -2.48
snR38snR38 CDC53Q12018 815 aaKnown RBP-0.41□□□□□ -2.48
snR38snR38 THP3Q12049 470 aaKnown RBP-0.41□□□□□ -2.48
snR38snR38 VPS54Q12071 889 aa-0.41□□□□□ -2.48
snR38snR38 RRP6Q12149 733 aaKnown RBP-0.41□□□□□ -2.48
snR38snR38 RKM5Q12367 367 aa-0.41□□□□□ -2.48
snR38snR38 NUP145P49687 1317 aa-0.41□□□□□ -2.48
snR38snR38 APA1P16550 321 aaKnown RBP-0.42□□□□□ -2.48
snR38snR38 IES6P32617 166 aa-0.42□□□□□ -2.48
snR38snR38 ROT2P38138 954 aa-0.42□□□□□ -2.48
snR38snR38 UBA4P38820 440 aa-0.42□□□□□ -2.48
snR38snR38 MGS1P40151 587 aa-0.42□□□□□ -2.48
snR38snR38 RPN11P43588 306 aaKnown RBP-0.42□□□□□ -2.48
snR38snR38 SMC3P47037 1230 aa-0.42□□□□□ -2.48
snR38snR38 BRO1P48582 844 aa-0.42□□□□□ -2.48
snR38snR38 YIP5P53108 310 aa-0.42□□□□□ -2.48
snR38snR38 INN1P53901 409 aa-0.42□□□□□ -2.48
snR38snR38 HXT11P54862 567 aa-0.42□□□□□ -2.48
snR38snR38 MRPS16Q02608 121 aa-0.42□□□□□ -2.48
snR38snR38 CTI6Q08923 506 aa-0.42□□□□□ -2.48
snR38snR38 APL4Q12028 832 aa-0.42□□□□□ -2.48
snR38snR38 YLR125WQ12138 136 aa-0.42□□□□□ -2.48
snR38snR38 CHS1P08004 1131 aa-0.43□□□□□ -2.48
snR38snR38 RPS21AP0C0V8 87 aaKnown RBP-0.43□□□□□ -2.48
snR38snR38 STI1P15705 589 aaKnown RBP RIP-Chip data-0.43□□□□□ -2.48not detected
snR38snR38 SNF6P18888 332 aa-0.43□□□□□ -2.48
snR38snR38 RFA2P26754 273 aaKnown RBP-0.43□□□□□ -2.48
snR38snR38 SPT10P35208 640 aa-0.43□□□□□ -2.48
snR38snR38 STB6P36085 766 aa-0.43□□□□□ -2.48
snR38snR38 TAF5P38129 798 aa-0.43□□□□□ -2.48
snR38snR38 MSG5P38590 489 aa-0.43□□□□□ -2.48
snR38snR38 AIM10P39965 576 aaKnown RBP-0.43□□□□□ -2.48
snR38snR38 RIC1P40395 1056 aa-0.43□□□□□ -2.48
snR38snR38 MNN11P46985 422 aaKnown RBP-0.43□□□□□ -2.48
snR38snR38 YJR030CP47101 745 aa-0.43□□□□□ -2.48
snR38snR38 YJR096WP47137 282 aa-0.43□□□□□ -2.48
snR38snR38 SDA1P53313 767 aaKnown RBP-0.43□□□□□ -2.48
snR38snR38 CWC25P53854 179 aaKnown RBP-0.43□□□□□ -2.48
snR38snR38 KTR6P54070 446 aa-0.43□□□□□ -2.48
snR38snR38 RHO4Q00246 291 aa-0.43□□□□□ -2.48
snR38snR38 MTG1Q03151 367 aaPredicted RBP-0.43□□□□□ -2.48
snR38snR38 CRD1Q07560 283 aa-0.43□□□□□ -2.48
snR38snR38 PUT4P15380 627 aa-0.44□□□□□ -2.48
snR38snR38 URK1P27515 501 aa-0.44□□□□□ -2.48
snR38snR38 CRM1P30822 1084 aaKnown RBP-0.44□□□□□ -2.48
snR38snR38 CYM1P32898 989 aa-0.44□□□□□ -2.48
snR38snR38 PPQ1P32945 549 aa-0.44□□□□□ -2.48
snR38snR38 SKN1P33336 771 aa-0.44□□□□□ -2.48
snR38snR38 HEL1P36113 551 aa-0.44□□□□□ -2.48
snR38snR38 ESL2P36168 1195 aa-0.44□□□□□ -2.48
snR38snR38 AAP1P37898 856 aaKnown RBP-0.44□□□□□ -2.48
snR38snR38 STL1P39932 569 aa-0.44□□□□□ -2.48
snR38snR38 VPS27P40343 622 aaKnown RBP-0.44□□□□□ -2.48
snR38snR38 MAD2P40958 196 aa-0.44□□□□□ -2.48
snR38snR38 STB1P42845 420 aa-0.44□□□□□ -2.48
snR38snR38 GOR1P53839 350 aa-0.44□□□□□ -2.48
snR38snR38 RGM1Q00453 211 aa-0.44□□□□□ -2.48
snR38snR38 TPS1Q00764 495 aaKnown RBP-0.44□□□□□ -2.48
snR38snR38 YVH1Q02256 364 aaKnown RBP-0.44□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms