RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W MET3P08536 511 aa3.91□□□□□ -1.78
VPS27YNR006W AMD2P22580 549 aa3.91□□□□□ -1.78
VPS27YNR006W PPH22P23595 377 aa3.91□□□□□ -1.78
VPS27YNR006W BUD5P25300 642 aaPredicted RBP3.91□□□□□ -1.78
VPS27YNR006W CTS1P29029 562 aa3.91□□□□□ -1.78
VPS27YNR006W NTH1P32356 751 aa3.91□□□□□ -1.78
VPS27YNR006W UGP1P32861 499 aaKnown RBP3.91□□□□□ -1.78
VPS27YNR006W NIP100P33420 868 aa3.91□□□□□ -1.78
VPS27YNR006W TUL1P36096 758 aa3.91□□□□□ -1.78
VPS27YNR006W MRPL40P36534 297 aa3.91□□□□□ -1.78
VPS27YNR006W WSS1P38838 269 aa3.91□□□□□ -1.78
VPS27YNR006W BUR6P40096 142 aa3.91□□□□□ -1.78
VPS27YNR006W RSM28Q03430 361 aa3.91□□□□□ -1.78
VPS27YNR006W VPS54Q12071 889 aa3.91□□□□□ -1.78
VPS27YNR006W BAG7Q12128 409 aa3.91□□□□□ -1.78
VPS27YNR006W ATG9Q12142 997 aa3.91□□□□□ -1.78
VPS27YNR006W TAF3Q12297 353 aa3.91□□□□□ -1.78
VPS27YNR006W AI5_ALPHAQ9ZZX1 630 aa3.91□□□□□ -1.78
VPS27YNR006W Q0010Q9ZZX9 128 aa3.91□□□□□ -1.78
VPS27YNR006W YML133CQ03099 1374 aa3.91□□□□□ -1.78
VPS27YNR006W YLL067CQ07888 1374 aa3.91□□□□□ -1.78
VPS27YNR006W YLL066CQ99208 1374 aa3.91□□□□□ -1.78
VPS27YNR006W ERG4P25340 473 aa3.9□□□□□ -1.78
VPS27YNR006W ELO2P25358 347 aa3.9□□□□□ -1.78
VPS27YNR006W CNE1P27825 502 aa3.9□□□□□ -1.78
VPS27YNR006W HES1P35843 434 aa3.9□□□□□ -1.78
VPS27YNR006W ELF1P36053 145 aa3.9□□□□□ -1.78
VPS27YNR006W AAP1P37898 856 aaKnown RBP3.9□□□□□ -1.78
VPS27YNR006W CTP1P38152 299 aa3.9□□□□□ -1.78
VPS27YNR006W VPS45P38932 577 aa3.9□□□□□ -1.78
VPS27YNR006W YIL089WP40500 205 aa3.9□□□□□ -1.78
VPS27YNR006W AGX1P43567 385 aa3.9□□□□□ -1.78
VPS27YNR006W STB2P46679 850 aa3.9□□□□□ -1.78
VPS27YNR006W NET1P47035 1189 aa3.9□□□□□ -1.78
VPS27YNR006W PAN2P53010 1115 aaPredicted RBP3.9□□□□□ -1.78
VPS27YNR006W YNL143CP53908 130 aa3.9□□□□□ -1.78
VPS27YNR006W MSC3Q05812 728 aa3.9□□□□□ -1.78
VPS27YNR006W YDL007C-AQ2V2Q0 85 aa3.9□□□□□ -1.78
VPS27YNR006W QCR6P00127 147 aa3.9□□□□□ -1.79
VPS27YNR006W RPL6BP05739 176 aaKnown RBP3.9□□□□□ -1.79
VPS27YNR006W KGD2P19262 463 aaPredicted RBP3.9□□□□□ -1.79
VPS27YNR006W GRR1P24814 1151 aa3.9□□□□□ -1.79
VPS27YNR006W HCM1P25364 564 aa3.9□□□□□ -1.79
VPS27YNR006W PUP3P25451 205 aaKnown RBP3.9□□□□□ -1.79
VPS27YNR006W YME1P32795 747 aa3.9□□□□□ -1.79
VPS27YNR006W YBR144CP34215 104 aa3.9□□□□□ -1.79
VPS27YNR006W DEF1P35732 738 aaKnown RBP3.9□□□□□ -1.79
VPS27YNR006W YPT10P38146 199 aa3.9□□□□□ -1.79
VPS27YNR006W DIA4P38705 446 aaPredicted RBP3.9□□□□□ -1.79
VPS27YNR006W UBP5P39944 805 aa3.9□□□□□ -1.79
VPS27YNR006W ELP2P42935 788 aa3.9□□□□□ -1.79
VPS27YNR006W YJL163CP46996 555 aa3.9□□□□□ -1.79
VPS27YNR006W YJL132WP47014 750 aa3.9□□□□□ -1.79
VPS27YNR006W EFM3P47163 339 aa3.9□□□□□ -1.79
VPS27YNR006W UBC11P52492 156 aa3.9□□□□□ -1.79
VPS27YNR006W VPS73P53142 486 aaKnown RBP3.9□□□□□ -1.79
VPS27YNR006W YGR266WP53326 701 aa3.9□□□□□ -1.79
VPS27YNR006W AQR1P53943 586 aa3.9□□□□□ -1.79
VPS27YNR006W RPL6AQ02326 176 aaKnown RBP3.9□□□□□ -1.79
VPS27YNR006W RRN5Q02983 363 aa3.9□□□□□ -1.79
VPS27YNR006W ARG7Q04728 441 aa3.9□□□□□ -1.79
VPS27YNR006W YDL242WQ07746 117 aa3.9□□□□□ -1.79
VPS27YNR006W SIL1Q08199 421 aa3.9□□□□□ -1.79
VPS27YNR006W YOL159CQ08300 171 aa3.9□□□□□ -1.79
VPS27YNR006W IRC13Q08630 104 aa3.9□□□□□ -1.79
VPS27YNR006W MLH3Q12083 715 aa3.9□□□□□ -1.79
VPS27YNR006W NTO1Q12311 748 aa3.9□□□□□ -1.79
VPS27YNR006W TFB5Q3E7C1 72 aaPredicted RBP3.9□□□□□ -1.79
VPS27YNR006W SIR3P06701 978 aa3.89□□□□□ -1.79
VPS27YNR006W TAL1P15019 335 aaKnown RBP3.89□□□□□ -1.79
VPS27YNR006W RRP43P25359 394 aaPredicted RBP3.89□□□□□ -1.79
VPS27YNR006W ADH7P25377 361 aa3.89□□□□□ -1.79
VPS27YNR006W YIM1P28625 365 aa3.89□□□□□ -1.79
VPS27YNR006W PHO11P35842 467 aa3.89□□□□□ -1.79
VPS27YNR006W PFF1P38244 976 aa3.89□□□□□ -1.79
VPS27YNR006W PHO12P38693 467 aa3.89□□□□□ -1.79
VPS27YNR006W YTA12P40341 825 aa3.89□□□□□ -1.79
VPS27YNR006W YGR149WP48236 432 aa3.89□□□□□ -1.79
VPS27YNR006W RPT4P53549 437 aaKnown RBP3.89□□□□□ -1.79
VPS27YNR006W ARP5P53946 755 aa3.89□□□□□ -1.79
VPS27YNR006W ADE16P54113 591 aaKnown RBP3.89□□□□□ -1.79
VPS27YNR006W SKO1Q02100 647 aa3.89□□□□□ -1.79
VPS27YNR006W PDS5Q04264 1277 aa3.89□□□□□ -1.79
VPS27YNR006W CHD1P32657 1468 aa3.89□□□□□ -1.79
VPS27YNR006W ILV2P07342 687 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W HRR25P29295 494 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W FAA1P30624 700 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W MRPL4P36517 319 aa3.88□□□□□ -1.79
VPS27YNR006W CCL1P37366 393 aa3.88□□□□□ -1.79
VPS27YNR006W HSM3P38348 480 aa3.88□□□□□ -1.79
VPS27YNR006W TOM22P49334 152 aa3.88□□□□□ -1.79
VPS27YNR006W DIA3P52290 468 aa3.88□□□□□ -1.79
VPS27YNR006W YMR160WQ03823 816 aa3.88□□□□□ -1.79
VPS27YNR006W RPN9Q04062 393 aaKnown RBP3.88□□□□□ -1.79
VPS27YNR006W VPS20Q04272 221 aa3.88□□□□□ -1.79
VPS27YNR006W YLR040CQ07988 224 aa3.88□□□□□ -1.79
VPS27YNR006W APC5Q08683 685 aa3.88□□□□□ -1.79
VPS27YNR006W YPL216WQ08964 1102 aa3.88□□□□□ -1.79
VPS27YNR006W SFG1Q12507 346 aa3.88□□□□□ -1.79
VPS27YNR006W YPK1P12688 680 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms