RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C MDM38Q08179 573 aa2.48□□□□□ -2.01
SGS1YMR190C TRE1Q08919 783 aa2.48□□□□□ -2.01
SGS1YMR190C YPR071WQ12346 211 aa2.48□□□□□ -2.01
SGS1YMR190C BRR2P32639 2163 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C UBR1P19812 1950 aa2.47□□□□□ -2.01
SGS1YMR190C YPR089WO13585 888 aa2.47□□□□□ -2.01
SGS1YMR190C SPO16P17122 198 aa2.47□□□□□ -2.01
SGS1YMR190C TSR4P25040 408 aa2.47□□□□□ -2.01
SGS1YMR190C ILV6P25605 309 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C GCS1P35197 352 aa2.47□□□□□ -2.01
SGS1YMR190C MRPL37P36532 105 aa2.47□□□□□ -2.01
SGS1YMR190C FHL1P39521 936 aa2.47□□□□□ -2.01
SGS1YMR190C RGI2P40188 164 aa2.47□□□□□ -2.01
SGS1YMR190C MET18P40469 1032 aa2.47□□□□□ -2.01
SGS1YMR190C IRC6P43615 237 aa2.47□□□□□ -2.01
SGS1YMR190C URB2P47108 1174 aa2.47□□□□□ -2.01
SGS1YMR190C DRN1P53255 507 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C YNR021WP53723 404 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C MET14Q02196 202 aa2.47□□□□□ -2.01
SGS1YMR190C UTP6Q02354 440 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C RNT1Q02555 471 aa2.47□□□□□ -2.01
SGS1YMR190C NUP53Q03790 475 aa2.47□□□□□ -2.01
SGS1YMR190C ACM1Q08981 209 aa2.47□□□□□ -2.01
SGS1YMR190C LPX1Q12405 387 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C ZPS1Q12512 249 aa2.47□□□□□ -2.01
SGS1YMR190C PAR32Q12515 295 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C HSH49Q99181 213 aaPredicted RBP2.47□□□□□ -2.01
SGS1YMR190C GCD1P09032 578 aaPredicted RBP2.47□□□□□ -2.01
SGS1YMR190C PDA1P16387 420 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C ERG8P24521 451 aa2.47□□□□□ -2.01
SGS1YMR190C SPS19P32573 292 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C SLX5P32828 619 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C OAF3P36023 863 aa2.47□□□□□ -2.01
SGS1YMR190C PRP39P39682 629 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C MRX1P40050 688 aa2.47□□□□□ -2.01
SGS1YMR190C MND2P40577 368 aa2.47□□□□□ -2.01
SGS1YMR190C YHC3P47040 408 aa2.47□□□□□ -2.01
SGS1YMR190C PUS4P48567 403 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C COG7P53195 279 aa2.47□□□□□ -2.01
SGS1YMR190C BSC2Q05611 235 aa2.47□□□□□ -2.01
SGS1YMR190C GPM3Q12326 303 aa2.47□□□□□ -2.01
SGS1YMR190C FAB1P34756 2278 aa2.47□□□□□ -2.01
SGS1YMR190C CDC20P26309 610 aa2.47□□□□□ -2.01
SGS1YMR190C RPT5P33297 434 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C YKL102CP34249 101 aa2.47□□□□□ -2.01
SGS1YMR190C ECM2P38241 364 aaKnown RBP2.47□□□□□ -2.01
SGS1YMR190C SAW1P39735 261 aa2.47□□□□□ -2.01
SGS1YMR190C NOP15P53927 220 aaPredicted RBP2.47□□□□□ -2.01
SGS1YMR190C SHR3Q02774 210 aa2.47□□□□□ -2.01
SGS1YMR190C RKM2Q03942 479 aa2.47□□□□□ -2.01
SGS1YMR190C CDD1Q06549 142 aa2.47□□□□□ -2.01
SGS1YMR190C ZRT2Q12436 422 aa2.47□□□□□ -2.01
SGS1YMR190C RRP36Q12481 300 aaPredicted RBP2.47□□□□□ -2.01
SGS1YMR190C DAP2P18962 818 aa2.46□□□□□ -2.01
SGS1YMR190C VBA3P25594 458 aa2.46□□□□□ -2.01
SGS1YMR190C PMT2P31382 759 aa2.46□□□□□ -2.01
SGS1YMR190C UBC6P33296 250 aaPredicted RBP2.46□□□□□ -2.01
SGS1YMR190C QNS1P38795 714 aaKnown RBP2.46□□□□□ -2.01
SGS1YMR190C YER188WP40103 239 aa2.46□□□□□ -2.01
SGS1YMR190C PRK1P40494 810 aa2.46□□□□□ -2.01
SGS1YMR190C INA22P40576 216 aa2.46□□□□□ -2.01
SGS1YMR190C SLS1P42900 643 aa2.46□□□□□ -2.01
SGS1YMR190C ALY2P47029 1046 aa2.46□□□□□ -2.01
SGS1YMR190C YJL049WP47048 450 aa2.46□□□□□ -2.01
SGS1YMR190C BNA1P47096 177 aa2.46□□□□□ -2.01
SGS1YMR190C YNL040WP53960 456 aaPredicted RBP2.46□□□□□ -2.01
SGS1YMR190C SPO20Q04359 397 aa2.46□□□□□ -2.01
SGS1YMR190C NUT2Q06213 157 aa2.46□□□□□ -2.01
SGS1YMR190C PRP16P15938 1071 aaPredicted RBP2.46□□□□□ -2.02
SGS1YMR190C GAL11P19659 1081 aa2.46□□□□□ -2.02
SGS1YMR190C TRX1P22217 103 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C SEC61P32915 480 aa2.46□□□□□ -2.02
SGS1YMR190C PBP2P38151 413 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SGS1YMR190C SKN7P38889 622 aa2.46□□□□□ -2.02
SGS1YMR190C FAD1P38913 306 aa2.46□□□□□ -2.02
SGS1YMR190C CCT2P39076 527 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C ROK1P45818 564 aaPredicted RBP2.46□□□□□ -2.02
SGS1YMR190C TRS85P46944 698 aa2.46□□□□□ -2.02
SGS1YMR190C NOG2P53742 486 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C YNL058CP53947 316 aa2.46□□□□□ -2.02
SGS1YMR190C TFB3Q03290 321 aa2.46□□□□□ -2.02
SGS1YMR190C RNH1Q04740 348 aa2.46□□□□□ -2.02
SGS1YMR190C CMS1Q07897 291 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C AIM39Q08223 395 aa2.46□□□□□ -2.02
SGS1YMR190C TPO4Q12256 659 aa2.46□□□□□ -2.02
SGS1YMR190C NOT5Q12514 560 aaPredicted RBP2.46□□□□□ -2.02
SGS1YMR190C FRT1Q99332 602 aa2.46□□□□□ -2.02
SGS1YMR190C SRV2P17555 526 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C EPT1P22140 391 aa2.46□□□□□ -2.02
SGS1YMR190C RRN6P32786 894 aa2.46□□□□□ -2.02
SGS1YMR190C AGP2P38090 596 aa2.46□□□□□ -2.02
SGS1YMR190C CBR1P38626 284 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C AIM18P38884 321 aa2.46□□□□□ -2.02
SGS1YMR190C KTR7P40504 517 aa2.46□□□□□ -2.02
SGS1YMR190C TDA10P42938 290 aa2.46□□□□□ -2.02
SGS1YMR190C TAH11P47112 604 aa2.46□□□□□ -2.02
SGS1YMR190C SHE4P51534 789 aa2.46□□□□□ -2.02
SGS1YMR190C SEH1P53011 349 aaKnown RBP2.46□□□□□ -2.02
SGS1YMR190C VAC7P53950 1165 aa2.46□□□□□ -2.02
SGS1YMR190C CDC55Q00362 526 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms