RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C GPA1P08539 472 aa5.16□□□□□ -1.58
NMD4YLR363C UBC1P21734 215 aaKnown RBP5.16□□□□□ -1.58
NMD4YLR363C OPI1P21957 404 aa5.16□□□□□ -1.58
NMD4YLR363C PTH2P34222 208 aa5.16□□□□□ -1.58
NMD4YLR363C ADE17P38009 592 aaKnown RBP5.16□□□□□ -1.58
NMD4YLR363C VID27P40157 782 aa5.16□□□□□ -1.58
NMD4YLR363C SCS3P53012 380 aa5.16□□□□□ -1.58
NMD4YLR363C CWC22P53333 577 aaKnown RBP5.16□□□□□ -1.58
NMD4YLR363C CDC16P09798 840 aa5.15□□□□□ -1.59
NMD4YLR363C YUR1P26725 428 aa5.15□□□□□ -1.59
NMD4YLR363C CHS3P29465 1165 aa5.15□□□□□ -1.59
NMD4YLR363C DBF20P32328 564 aa5.15□□□□□ -1.59
NMD4YLR363C TPM2P40414 161 aa5.15□□□□□ -1.59
NMD4YLR363C YIL152WP40455 235 aa5.15□□□□□ -1.59
NMD4YLR363C COG1P53079 417 aa5.15□□□□□ -1.59
NMD4YLR363C YGL036WP53185 909 aaPredicted RBP5.15□□□□□ -1.59
NMD4YLR363C CAC2Q04199 468 aa5.15□□□□□ -1.59
NMD4YLR363C CRN1Q06440 651 aa5.15□□□□□ -1.59
NMD4YLR363C POS5Q06892 414 aa5.15□□□□□ -1.59
NMD4YLR363C DSE3Q08729 430 aa5.15□□□□□ -1.59
NMD4YLR363C BUD7Q08754 746 aa5.15□□□□□ -1.59
NMD4YLR363C FRE3Q08905 711 aa5.15□□□□□ -1.59
NMD4YLR363C TY2A-LR1P0C2J4 438 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-FP0CX61 438 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-GR2P0CX62 438 aa5.14□□□□□ -1.59
NMD4YLR363C SRP54P20424 541 aaKnown RBP5.14□□□□□ -1.59
NMD4YLR363C TY2A-CP25383 438 aa5.14□□□□□ -1.59
NMD4YLR363C RAD16P31244 790 aa5.14□□□□□ -1.59
NMD4YLR363C UTR4P32626 227 aa5.14□□□□□ -1.59
NMD4YLR363C PRS1P32895 427 aaKnown RBP5.14□□□□□ -1.59
NMD4YLR363C XRS2P33301 854 aa5.14□□□□□ -1.59
NMD4YLR363C LHS1P36016 881 aa5.14□□□□□ -1.59
NMD4YLR363C UBP13P38187 747 aa5.14□□□□□ -1.59
NMD4YLR363C PHO88P38264 188 aaPredicted RBP5.14□□□□□ -1.59
NMD4YLR363C MRX1P40050 688 aa5.14□□□□□ -1.59
NMD4YLR363C SMK1P41808 388 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-DR2Q03483 438 aa5.14□□□□□ -1.59
NMD4YLR363C ECM16Q04217 1267 aaKnown RBP5.14□□□□□ -1.59
NMD4YLR363C TDA9Q04545 1251 aa5.14□□□□□ -1.59
NMD4YLR363C CSR1Q06705 408 aaKnown RBP5.14□□□□□ -1.59
NMD4YLR363C TY2A-BQ12260 438 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-OR2Q12293 438 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-DR1Q12392 438 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-OR1Q12439 438 aa5.14□□□□□ -1.59
NMD4YLR363C TY2A-DR3Q99303 438 aa5.14□□□□□ -1.59
NMD4YLR363C YPR117WQ06116 2489 aa5.14□□□□□ -1.59
NMD4YLR363C YER145C-AA0A023PYF4 145 aa5.13□□□□□ -1.59
NMD4YLR363C COQ1P18900 473 aa5.13□□□□□ -1.59
NMD4YLR363C AFG3P39925 761 aa5.13□□□□□ -1.59
NMD4YLR363C MLH2Q07980 695 aa5.13□□□□□ -1.59
NMD4YLR363C TMA16Q08687 178 aa5.13□□□□□ -1.59
NMD4YLR363C SAM2P19358 384 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C MCM4P30665 933 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C SOF1P33750 489 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C TFC3P34111 1160 aa5.12□□□□□ -1.59
NMD4YLR363C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
NMD4YLR363C AAP1P37898 856 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C IFA38P38286 347 aa5.12□□□□□ -1.59
NMD4YLR363C RFC1P38630 861 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C VPS45P38932 577 aa5.12□□□□□ -1.59
NMD4YLR363C SEC31P38968 1273 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C NOC2P39744 710 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C STB2P46679 850 aa5.12□□□□□ -1.59
NMD4YLR363C PIB2P53191 635 aa5.12□□□□□ -1.59
NMD4YLR363C SPH1Q06160 661 aa5.12□□□□□ -1.59
NMD4YLR363C YLR112WQ12130 139 aa5.12□□□□□ -1.59
NMD4YLR363C ERG27Q12452 347 aaKnown RBP5.12□□□□□ -1.59
NMD4YLR363C PCD1Q12524 340 aa5.12□□□□□ -1.59
NMD4YLR363C TY1B-AO13527 1196 aaKnown RBP5.11□□□□□ -1.59
NMD4YLR363C TPM1P17536 199 aaKnown RBP5.11□□□□□ -1.59
NMD4YLR363C SRB5P32585 307 aa5.11□□□□□ -1.59
NMD4YLR363C MYO3P36006 1272 aa5.11□□□□□ -1.59
NMD4YLR363C NTR2P36118 322 aaPredicted RBP5.11□□□□□ -1.59
NMD4YLR363C IST3P40565 148 aaPredicted RBP5.11□□□□□ -1.59
NMD4YLR363C CTF18P49956 741 aa5.11□□□□□ -1.59
NMD4YLR363C LSB1P53281 241 aa5.11□□□□□ -1.59
NMD4YLR363C PFA5Q03289 374 aa5.11□□□□□ -1.59
NMD4YLR363C ECI1Q05871 280 aa5.11□□□□□ -1.59
NMD4YLR363C AHC1Q12433 566 aa5.11□□□□□ -1.59
NMD4YLR363C RPL42AP0CX27 106 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C RPL42BP0CX28 106 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C SAM1P10659 382 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C PRO3P32263 286 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C ANP1P32629 500 aa5.1□□□□□ -1.59
NMD4YLR363C MCR1P36060 302 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C ARC40P38328 384 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C PCL6P40038 420 aa5.1□□□□□ -1.59
NMD4YLR363C SAP185P40856 1058 aa5.1□□□□□ -1.59
NMD4YLR363C MEP2P41948 499 aa5.1□□□□□ -1.59
NMD4YLR363C RPT6Q01939 405 aaKnown RBP5.1□□□□□ -1.59
NMD4YLR363C YMR034CQ05131 434 aaPredicted RBP5.1□□□□□ -1.59
NMD4YLR363C TFC6Q06339 672 aa5.1□□□□□ -1.59
NMD4YLR363C PLP2Q12017 286 aa5.1□□□□□ -1.59
NMD4YLR363C PET111P08468 800 aa5.09□□□□□ -1.59
NMD4YLR363C POX1P13711 748 aa5.09□□□□□ -1.59
NMD4YLR363C SNA3P14359 133 aa5.09□□□□□ -1.59
NMD4YLR363C TKL1P23254 680 aaKnown RBP5.09□□□□□ -1.59
NMD4YLR363C STE50P25344 346 aa5.09□□□□□ -1.59
NMD4YLR363C YCR043CP25361 127 aa5.09□□□□□ -1.59
NMD4YLR363C UME6P39001 836 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms