RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W PEP3P27801 918 aa2.02□□□□□ -2.09
CFT2YLR115W GPI10P30777 616 aa2.02□□□□□ -2.09
CFT2YLR115W ATO2P32907 282 aa2.02□□□□□ -2.09
CFT2YLR115W APM3P38153 483 aa2.02□□□□□ -2.09
CFT2YLR115W HSM3P38348 480 aa2.02□□□□□ -2.09
CFT2YLR115W RRF1P38771 230 aa2.02□□□□□ -2.09
CFT2YLR115W YHR131CP38835 850 aa2.02□□□□□ -2.09
CFT2YLR115W LCB2P40970 561 aa2.02□□□□□ -2.09
CFT2YLR115W SSU1P41930 458 aa2.02□□□□□ -2.09
CFT2YLR115W IRC6P43615 237 aa2.02□□□□□ -2.09
CFT2YLR115W YPR003CP53394 754 aa2.02□□□□□ -2.09
CFT2YLR115W LSC1P53598 329 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W EAF7P53911 425 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W PRP42Q03776 544 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W CDC45Q08032 650 aa2.02□□□□□ -2.09
CFT2YLR115W CUE5Q08412 411 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W NFI1Q12216 726 aa2.02□□□□□ -2.09
CFT2YLR115W YBR255C-AQ3E776 120 aa2.02□□□□□ -2.09
CFT2YLR115W SEM1O94742 89 aa2.02□□□□□ -2.09
CFT2YLR115W CKA1P15790 372 aa2.02□□□□□ -2.09
CFT2YLR115W TAF5P38129 798 aa2.02□□□□□ -2.09
CFT2YLR115W RKM3P38222 552 aa2.02□□□□□ -2.09
CFT2YLR115W TOM71P38825 639 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W VPS41P38959 992 aa2.02□□□□□ -2.09
CFT2YLR115W LYS14P40971 790 aa2.02□□□□□ -2.09
CFT2YLR115W MAD3P47074 515 aa2.02□□□□□ -2.09
CFT2YLR115W GIM3P53900 129 aa2.02□□□□□ -2.09
CFT2YLR115W RRN5Q02983 363 aa2.02□□□□□ -2.09
CFT2YLR115W NUP53Q03790 475 aa2.02□□□□□ -2.09
CFT2YLR115W GRX3Q03835 250 aa2.02□□□□□ -2.09
CFT2YLR115W VPS64Q03944 604 aa2.02□□□□□ -2.09
CFT2YLR115W DPB4Q04603 196 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W ATG38Q05789 226 aaKnown RBP2.02□□□□□ -2.09
CFT2YLR115W NBP2Q12163 236 aa2.02□□□□□ -2.09
CFT2YLR115W MDY2Q12285 212 aa2.02□□□□□ -2.09
CFT2YLR115W SEC53P07283 254 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W MIS1P09440 975 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W CDC16P09798 840 aa2.01□□□□□ -2.09
CFT2YLR115W YML002WP0CF17 737 aa2.01□□□□□ -2.09
CFT2YLR115W MSS116P15424 664 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W SMY1P32364 656 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W SWH1P35845 1188 aa2.01□□□□□ -2.09
CFT2YLR115W ARN1P38731 627 aa2.01□□□□□ -2.09
CFT2YLR115W LNP1P38878 278 aa2.01□□□□□ -2.09
CFT2YLR115W SMC2P38989 1170 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W EPL1P43572 832 aa2.01□□□□□ -2.09
CFT2YLR115W LIA1P47120 325 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W ARP5P53946 755 aa2.01□□□□□ -2.09
CFT2YLR115W AIM32Q04689 311 aa2.01□□□□□ -2.09
CFT2YLR115W ARP9Q05123 467 aa2.01□□□□□ -2.09
CFT2YLR115W YOR389WQ08912 624 aa2.01□□□□□ -2.09
CFT2YLR115W ARP7Q12406 477 aa2.01□□□□□ -2.09
CFT2YLR115W PDH1Q12428 516 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W PFK27Q12471 397 aaPredicted RBP2.01□□□□□ -2.09
CFT2YLR115W FRE6Q12473 712 aa2.01□□□□□ -2.09
CFT2YLR115W SNQ2P32568 1501 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W YFL068WP0CX99 160 aa2.01□□□□□ -2.09
CFT2YLR115W YLL066W-AP0CY00 160 aa2.01□□□□□ -2.09
CFT2YLR115W YLL067W-AP0CY01 160 aa2.01□□□□□ -2.09
CFT2YLR115W SWC3P31376 625 aa2.01□□□□□ -2.09
CFT2YLR115W NPL6P32832 435 aa2.01□□□□□ -2.09
CFT2YLR115W MRP4P32902 394 aa2.01□□□□□ -2.09
CFT2YLR115W VPS17P32913 551 aa2.01□□□□□ -2.09
CFT2YLR115W RPF2P36160 344 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W RTS1P38903 757 aa2.01□□□□□ -2.09
CFT2YLR115W STT3P39007 718 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W LAM5P43560 674 aa2.01□□□□□ -2.09
CFT2YLR115W MDV1P47025 714 aa2.01□□□□□ -2.09
CFT2YLR115W ORC5P50874 479 aa2.01□□□□□ -2.09
CFT2YLR115W NNF2P53253 936 aa2.01□□□□□ -2.09
CFT2YLR115W BSC5P53755 489 aa2.01□□□□□ -2.09
CFT2YLR115W UTP21Q06078 939 aaPredicted RBP2.01□□□□□ -2.09
CFT2YLR115W SPH1Q06160 661 aa2.01□□□□□ -2.09
CFT2YLR115W ARV1Q06541 321 aa2.01□□□□□ -2.09
CFT2YLR115W TSR1Q07381 788 aaKnown RBP2.01□□□□□ -2.09
CFT2YLR115W SNA4Q07549 140 aa2.01□□□□□ -2.09
CFT2YLR115W LEA1Q08963 238 aaPredicted RBP2.01□□□□□ -2.09
CFT2YLR115W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
CFT2YLR115W RRI1Q12468 440 aa2.01□□□□□ -2.09
CFT2YLR115W YOR111WQ99210 232 aa2.01□□□□□ -2.09
CFT2YLR115W MET17P06106 444 aa2□□□□□ -2.09
CFT2YLR115W CTT1P06115 562 aa2□□□□□ -2.09
CFT2YLR115W FUM1P08417 488 aaKnown RBP2□□□□□ -2.09
CFT2YLR115W KSS1P14681 368 aa2□□□□□ -2.09
CFT2YLR115W PUT4P15380 627 aa2□□□□□ -2.09
CFT2YLR115W MET8P15807 274 aa2□□□□□ -2.09
CFT2YLR115W CLB3P24870 427 aa2□□□□□ -2.09
CFT2YLR115W CLB4P24871 460 aa2□□□□□ -2.09
CFT2YLR115W PHO84P25297 587 aaKnown RBP2□□□□□ -2.09
CFT2YLR115W SGF29P25554 259 aa2□□□□□ -2.09
CFT2YLR115W SPB1P25582 841 aaPredicted RBP2□□□□□ -2.09
CFT2YLR115W HES1P35843 434 aa2□□□□□ -2.09
CFT2YLR115W LAS1P36146 502 aaPredicted RBP2□□□□□ -2.09
CFT2YLR115W ESL2P36168 1195 aa2□□□□□ -2.09
CFT2YLR115W YBL029WP38201 376 aa2□□□□□ -2.09
CFT2YLR115W BUD16P39988 312 aa2□□□□□ -2.09
CFT2YLR115W TPA1P40032 644 aaKnown RBP2□□□□□ -2.09
CFT2YLR115W RIC1P40395 1056 aa2□□□□□ -2.09
CFT2YLR115W AGX1P43567 385 aa2□□□□□ -2.09
CFT2YLR115W MDE1P47095 244 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms