RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YOL019WQ08157 551 aa2.31□□□□□ -2.04
CSF1YLR087C MNL2Q12205 849 aa2.31□□□□□ -2.04
CSF1YLR087C ATG11Q12527 1178 aa2.31□□□□□ -2.04
CSF1YLR087C PUP1P25043 261 aa2.31□□□□□ -2.04
CSF1YLR087C BUD5P25300 642 aaPredicted RBP2.31□□□□□ -2.04
CSF1YLR087C UTR4P32626 227 aa2.31□□□□□ -2.04
CSF1YLR087C EAP1P36041 632 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C AVT2P39981 480 aa2.31□□□□□ -2.04
CSF1YLR087C PAN6P40459 309 aa2.31□□□□□ -2.04
CSF1YLR087C SEC28P40509 296 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C FAR3P46671 204 aa2.31□□□□□ -2.04
CSF1YLR087C NMA111P53920 997 aa2.31□□□□□ -2.04
CSF1YLR087C YKR005CQ02203 525 aa2.31□□□□□ -2.04
CSF1YLR087C GIM5Q04493 163 aa2.31□□□□□ -2.04
CSF1YLR087C GTO3Q04806 366 aa2.31□□□□□ -2.04
CSF1YLR087C YPR098CQ06089 161 aa2.31□□□□□ -2.04
CSF1YLR087C RRG7Q08774 242 aaPredicted RBP2.31□□□□□ -2.04
CSF1YLR087C TY1B-NL2Q99337 1749 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C TUF1P02992 437 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C GCN3P14741 305 aa2.31□□□□□ -2.04
CSF1YLR087C URE2P23202 354 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C AGP2P38090 596 aa2.31□□□□□ -2.04
CSF1YLR087C AVT5P38176 459 aa2.31□□□□□ -2.04
CSF1YLR087C PCA1P38360 1216 aa2.31□□□□□ -2.04
CSF1YLR087C FET3P38993 636 aa2.31□□□□□ -2.04
CSF1YLR087C PFK26P40433 827 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C LSB6P42951 607 aa2.31□□□□□ -2.04
CSF1YLR087C UBC12P52491 188 aa2.31□□□□□ -2.04
CSF1YLR087C ROD1Q02805 837 aa2.31□□□□□ -2.04
CSF1YLR087C RSN1Q03516 953 aa2.31□□□□□ -2.04
CSF1YLR087C CSM3Q04659 317 aa2.31□□□□□ -2.04
CSF1YLR087C YTH1Q06102 208 aaPredicted RBP2.31□□□□□ -2.04
CSF1YLR087C SLF1Q12034 447 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C ARP7Q12406 477 aa2.31□□□□□ -2.04
CSF1YLR087C YER190C-BP0CX94 160 aa2.31□□□□□ -2.04
CSF1YLR087C YEL077W-AP0CX95 160 aa2.31□□□□□ -2.04
CSF1YLR087C YGR296C-BP0CX96 160 aa2.31□□□□□ -2.04
CSF1YLR087C YPL283W-BP0CX97 160 aa2.31□□□□□ -2.04
CSF1YLR087C YPR204C-AP0CX98 160 aa2.31□□□□□ -2.04
CSF1YLR087C NDC1P32500 655 aa2.31□□□□□ -2.04
CSF1YLR087C EGD2P38879 174 aaKnown RBP2.31□□□□□ -2.04
CSF1YLR087C ARG2P40360 574 aa2.31□□□□□ -2.04
CSF1YLR087C CTF18P49956 741 aa2.31□□□□□ -2.04
CSF1YLR087C YMR074CQ04773 145 aa2.31□□□□□ -2.04
CSF1YLR087C GRS2Q06817 618 aa2.31□□□□□ -2.04
CSF1YLR087C COA3Q3E7B2 85 aa2.31□□□□□ -2.04
CSF1YLR087C PYC2P32327 1180 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C SPR1P32603 445 aa2.3□□□□□ -2.04
CSF1YLR087C BEM3P32873 1128 aa2.3□□□□□ -2.04
CSF1YLR087C YNK1P36010 153 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C MRPL15P36523 253 aa2.3□□□□□ -2.04
CSF1YLR087C VMA13P41807 478 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C MET14Q02196 202 aa2.3□□□□□ -2.04
CSF1YLR087C YMR102CQ03177 834 aa2.3□□□□□ -2.04
CSF1YLR087C RSM24Q03976 319 aa2.3□□□□□ -2.04
CSF1YLR087C YPQ2Q06328 317 aa2.3□□□□□ -2.04
CSF1YLR087C ULA1Q12059 462 aa2.3□□□□□ -2.04
CSF1YLR087C PMR1P13586 950 aa2.3□□□□□ -2.04
CSF1YLR087C HOM6P31116 359 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C SIN4P32259 974 aa2.3□□□□□ -2.04
CSF1YLR087C PET112P33893 541 aa2.3□□□□□ -2.04
CSF1YLR087C YUH1P35127 236 aa2.3□□□□□ -2.04
CSF1YLR087C RPC25P35718 212 aa2.3□□□□□ -2.04
CSF1YLR087C DIM1P41819 318 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C SHR3Q02774 210 aa2.3□□□□□ -2.04
CSF1YLR087C ISU1Q03020 165 aa2.3□□□□□ -2.04
CSF1YLR087C VTI1Q04338 217 aa2.3□□□□□ -2.04
CSF1YLR087C SGT1Q08446 395 aa2.3□□□□□ -2.04
CSF1YLR087C RHO2P06781 192 aa2.3□□□□□ -2.04
CSF1YLR087C RAD10P06838 210 aa2.3□□□□□ -2.04
CSF1YLR087C HEM1P09950 548 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C CBF2P32504 956 aa2.3□□□□□ -2.04
CSF1YLR087C GDA1P32621 518 aa2.3□□□□□ -2.04
CSF1YLR087C STV1P37296 890 aa2.3□□□□□ -2.04
CSF1YLR087C UBX7P38349 436 aa2.3□□□□□ -2.04
CSF1YLR087C NSE4P43124 402 aa2.3□□□□□ -2.04
CSF1YLR087C MRX5P47007 382 aa2.3□□□□□ -2.04
CSF1YLR087C PRP42Q03776 544 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C MUS81Q04149 632 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C ECM3Q99252 613 aa2.3□□□□□ -2.04
CSF1YLR087C COS2P0CX12 379 aa2.3□□□□□ -2.04
CSF1YLR087C COS3P0CX13 379 aa2.3□□□□□ -2.04
CSF1YLR087C CBP3P21560 335 aa2.3□□□□□ -2.04
CSF1YLR087C CDC12P32468 407 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C DOM34P33309 386 aa2.3□□□□□ -2.04
CSF1YLR087C ERT1P38140 529 aa2.3□□□□□ -2.04
CSF1YLR087C MPT5P39016 859 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CSF1YLR087C YIL161WP40449 235 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C AIM24P47127 394 aa2.3□□□□□ -2.04
CSF1YLR087C STR2P47164 639 aa2.3□□□□□ -2.04
CSF1YLR087C SAM37P50110 327 aa2.3□□□□□ -2.04
CSF1YLR087C CLD1P53264 445 aa2.3□□□□□ -2.04
CSF1YLR087C RTN1Q04947 295 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C YDL129WQ07555 291 aa2.3□□□□□ -2.04
CSF1YLR087C NSE1Q07913 336 aa2.3□□□□□ -2.04
CSF1YLR087C CAF20P12962 161 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C OM45P16547 393 aa2.3□□□□□ -2.04
CSF1YLR087C OAF3P36023 863 aa2.3□□□□□ -2.04
CSF1YLR087C YBR238CP38330 731 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C OSH7P38755 437 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms