RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YDL057WQ07379 328 aa3.39□□□□□ -1.87
SDO1YLR022C PEX15Q08215 383 aa3.39□□□□□ -1.87
SDO1YLR022C GEP3Q08622 556 aa3.39□□□□□ -1.87
SDO1YLR022C CIR2Q08822 631 aa3.39□□□□□ -1.87
SDO1YLR022C PRS5Q12265 496 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C COX3P00420 269 aa3.38□□□□□ -1.87
SDO1YLR022C URA3P03962 267 aa3.38□□□□□ -1.87
SDO1YLR022C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SDO1YLR022C SIF2P38262 535 aa3.38□□□□□ -1.87
SDO1YLR022C STL1P39932 569 aa3.38□□□□□ -1.87
SDO1YLR022C RAD26P40352 1085 aa3.38□□□□□ -1.87
SDO1YLR022C YIL161WP40449 235 aaKnown RBP3.38□□□□□ -1.87
SDO1YLR022C COS12P53053 380 aa3.38□□□□□ -1.87
SDO1YLR022C HOL1P53389 586 aa3.38□□□□□ -1.87
SDO1YLR022C YNR071CP53757 342 aa3.38□□□□□ -1.87
SDO1YLR022C TDA7P53882 636 aaPredicted RBP3.38□□□□□ -1.87
SDO1YLR022C IDP3P53982 420 aaKnown RBP3.38□□□□□ -1.87
SDO1YLR022C TOF2Q02208 771 aa3.38□□□□□ -1.87
SDO1YLR022C AIM33Q04516 312 aa3.38□□□□□ -1.87
SDO1YLR022C CYK3Q07533 885 aa3.38□□□□□ -1.87
SDO1YLR022C RPN8Q08723 338 aaKnown RBP3.38□□□□□ -1.87
SDO1YLR022C DIN7Q12086 430 aa3.38□□□□□ -1.87
SDO1YLR022C AHA1Q12449 350 aaKnown RBP3.38□□□□□ -1.87
SDO1YLR022C YOR111WQ99210 232 aa3.38□□□□□ -1.87
SDO1YLR022C REV1P12689 985 aa3.37□□□□□ -1.87
SDO1YLR022C URE2P23202 354 aaKnown RBP3.37□□□□□ -1.87
SDO1YLR022C PET309P32522 965 aaPredicted RBP3.37□□□□□ -1.87
SDO1YLR022C GDA1P32621 518 aa3.37□□□□□ -1.87
SDO1YLR022C YBR056WP38081 501 aa3.37□□□□□ -1.87
SDO1YLR022C PFS1P38872 237 aa3.37□□□□□ -1.87
SDO1YLR022C FET5P43561 622 aa3.37□□□□□ -1.87
SDO1YLR022C POL31P46957 487 aa3.37□□□□□ -1.87
SDO1YLR022C CUL3P53202 744 aa3.37□□□□□ -1.87
SDO1YLR022C RTT102P53330 157 aa3.37□□□□□ -1.87
SDO1YLR022C BNI5P53890 448 aaKnown RBP3.37□□□□□ -1.87
SDO1YLR022C YNL146WP53906 100 aa3.37□□□□□ -1.87
SDO1YLR022C RAD33Q04231 177 aa3.37□□□□□ -1.87
SDO1YLR022C ENT2Q05785 613 aa3.37□□□□□ -1.87
SDO1YLR022C ECM38Q05902 660 aaPredicted RBP3.37□□□□□ -1.87
SDO1YLR022C BRE1Q07457 700 aaKnown RBP3.37□□□□□ -1.87
SDO1YLR022C YPL272CQ08984 517 aa3.37□□□□□ -1.87
SDO1YLR022C TAF10Q12030 206 aa3.37□□□□□ -1.87
SDO1YLR022C TMA17Q12513 150 aa3.37□□□□□ -1.87
SDO1YLR022C ADE3P07245 946 aaKnown RBP3.36□□□□□ -1.87
SDO1YLR022C PRR1P28708 518 aa3.36□□□□□ -1.87
SDO1YLR022C SAS3P34218 831 aa3.36□□□□□ -1.87
SDO1YLR022C COQ5P49017 307 aa3.36□□□□□ -1.87
SDO1YLR022C COG6P53959 839 aa3.36□□□□□ -1.87
SDO1YLR022C RSM10Q03201 203 aa3.36□□□□□ -1.87
SDO1YLR022C ECM7Q06200 448 aa3.36□□□□□ -1.87
SDO1YLR022C SMD2Q06217 110 aaKnown RBP3.36□□□□□ -1.87
SDO1YLR022C IES4Q08561 116 aa3.36□□□□□ -1.87
SDO1YLR022C SLX4Q12098 748 aa3.36□□□□□ -1.87
SDO1YLR022C HOS1Q12214 470 aa3.36□□□□□ -1.87
SDO1YLR022C CRC1Q12289 327 aa3.36□□□□□ -1.87
SDO1YLR022C RKM5Q12367 367 aa3.36□□□□□ -1.87
SDO1YLR022C BI2P03873 423 aa3.35□□□□□ -1.87
SDO1YLR022C YAP1P19880 650 aaKnown RBP3.35□□□□□ -1.87
SDO1YLR022C AMD2P22580 549 aa3.35□□□□□ -1.87
SDO1YLR022C VPS24P36095 224 aaKnown RBP3.35□□□□□ -1.87
SDO1YLR022C SPC97P38863 823 aa3.35□□□□□ -1.87
SDO1YLR022C GAA1P39012 614 aa3.35□□□□□ -1.87
SDO1YLR022C LAS21P40367 830 aa3.35□□□□□ -1.87
SDO1YLR022C YIL092WP40497 633 aa3.35□□□□□ -1.87
SDO1YLR022C PCI8P40512 444 aa3.35□□□□□ -1.87
SDO1YLR022C MNT3P40549 630 aa3.35□□□□□ -1.87
SDO1YLR022C UBX6P47049 396 aa3.35□□□□□ -1.87
SDO1YLR022C NPA3P47122 385 aa3.35□□□□□ -1.87
SDO1YLR022C YJR120WP47157 116 aa3.35□□□□□ -1.87
SDO1YLR022C PUS4P48567 403 aaKnown RBP3.35□□□□□ -1.87
SDO1YLR022C TRS130Q03660 1102 aa3.35□□□□□ -1.87
SDO1YLR022C PRM6Q04705 352 aa3.35□□□□□ -1.87
SDO1YLR022C TRI1Q05024 226 aa3.35□□□□□ -1.87
SDO1YLR022C BNA5Q05979 453 aa3.35□□□□□ -1.87
SDO1YLR022C TPO3Q06451 622 aa3.35□□□□□ -1.87
SDO1YLR022C SHS1Q07657 551 aa3.35□□□□□ -1.87
SDO1YLR022C CTF3Q12748 733 aa3.35□□□□□ -1.87
SDO1YLR022C TMA7Q3E764 64 aaKnown RBP3.35□□□□□ -1.87
SDO1YLR022C PNO1Q99216 274 aaKnown RBP3.35□□□□□ -1.87
SDO1YLR022C Q0010Q9ZZX9 128 aa3.35□□□□□ -1.87
SDO1YLR022C RPL4AP10664 362 aaKnown RBP3.34□□□□□ -1.87
SDO1YLR022C TCP1P12612 559 aaKnown RBP3.34□□□□□ -1.87
SDO1YLR022C MAK32P23060 363 aa3.34□□□□□ -1.87
SDO1YLR022C PLC1P32383 869 aa3.34□□□□□ -1.87
SDO1YLR022C COT1P32798 439 aa3.34□□□□□ -1.87
SDO1YLR022C MMS4P38257 691 aa3.34□□□□□ -1.87
SDO1YLR022C ATG12P38316 186 aa3.34□□□□□ -1.87
SDO1YLR022C DSN1P40568 576 aa3.34□□□□□ -1.87
SDO1YLR022C CIR1P42940 261 aa3.34□□□□□ -1.87
SDO1YLR022C RPL4BP49626 362 aaKnown RBP3.34□□□□□ -1.87
SDO1YLR022C PEX14P53112 341 aa3.34□□□□□ -1.87
SDO1YLR022C COG2P53271 262 aa3.34□□□□□ -1.87
SDO1YLR022C SWS2P53937 143 aa3.34□□□□□ -1.87
SDO1YLR022C YPL071CQ02864 156 aa3.34□□□□□ -1.87
SDO1YLR022C YML119WQ03208 357 aa3.34□□□□□ -1.87
SDO1YLR022C CSM3Q04659 317 aa3.34□□□□□ -1.87
SDO1YLR022C YDL121CQ07541 149 aa3.34□□□□□ -1.87
SDO1YLR022C LCB4Q12246 624 aa3.34□□□□□ -1.87
SDO1YLR022C ATP4P05626 244 aa3.33□□□□□ -1.88
SDO1YLR022C YMR085WP0CF18 432 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms