RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeastyeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOM6YJR139C AAT1Q01802 451 aa12.6□□□□□ -0.39
HOM6YJR139C TDA5Q06417 326 aaKnown RBP12.6□□□□□ -0.39
HOM6YJR139C TEL1P38110 2787 aa12.59□□□□□ -0.39
HOM6YJR139C MRPL37P36532 105 aa12.59□□□□□ -0.39
HOM6YJR139C SPF1P39986 1215 aaKnown RBP12.59□□□□□ -0.39
HOM6YJR139C MEP1P40260 492 aa12.59□□□□□ -0.39
HOM6YJR139C GCD14P46959 383 aaPredicted RBP12.59□□□□□ -0.39
HOM6YJR139C EGD1Q02642 157 aaKnown RBP12.59□□□□□ -0.39
HOM6YJR139C YDR056CQ12025 205 aa12.59□□□□□ -0.39
HOM6YJR139C RUD3Q12234 484 aaKnown RBP12.59□□□□□ -0.39
HOM6YJR139C GPR1Q12361 961 aa12.59□□□□□ -0.39
HOM6YJR139C SRV2P17555 526 aaKnown RBP12.58□□□□□ -0.4
HOM6YJR139C OCA5P38738 679 aa12.58□□□□□ -0.4
HOM6YJR139C LIA1P47120 325 aaKnown RBP12.58□□□□□ -0.4
HOM6YJR139C YMR155WQ03795 547 aa12.58□□□□□ -0.4
HOM6YJR139C APC9Q12107 265 aa12.58□□□□□ -0.4
HOM6YJR139C YPL247CQ12523 523 aa12.58□□□□□ -0.4
HOM6YJR139C MET8P15807 274 aa12.57□□□□□ -0.4
HOM6YJR139C CLN2P20438 545 aa12.57□□□□□ -0.4
HOM6YJR139C CLB1P24868 471 aa12.57□□□□□ -0.4
HOM6YJR139C CWP1P28319 239 aa12.57□□□□□ -0.4
HOM6YJR139C SPT16P32558 1035 aaKnown RBP12.57□□□□□ -0.4
HOM6YJR139C NUP120P35729 1037 aa12.57□□□□□ -0.4
HOM6YJR139C ARA1P38115 344 aa12.57□□□□□ -0.4
HOM6YJR139C LIN1P38852 340 aaPredicted RBP12.57□□□□□ -0.4
HOM6YJR139C DHH1P39517 506 aaKnown RBP12.57□□□□□ -0.4
HOM6YJR139C OAF1P39720 1047 aaPredicted RBP12.57□□□□□ -0.4
HOM6YJR139C YRB1P41920 201 aaKnown RBP12.57□□□□□ -0.4
HOM6YJR139C IST1P53843 298 aaPredicted RBP12.57□□□□□ -0.4
HOM6YJR139C YAT1P80235 687 aa12.57□□□□□ -0.4
HOM6YJR139C RNT1Q02555 471 aa12.57□□□□□ -0.4
HOM6YJR139C CTK1Q03957 528 aaKnown RBP12.57□□□□□ -0.4
HOM6YJR139C YLR456WQ06199 204 aa12.57□□□□□ -0.4
HOM6YJR139C VAM6Q07468 1049 aa12.57□□□□□ -0.4
HOM6YJR139C NHA1Q99271 985 aa12.57□□□□□ -0.4
HOM6YJR139C PRP16P15938 1071 aaPredicted RBP12.56□□□□□ -0.4
HOM6YJR139C SKT5P34226 696 aa12.56□□□□□ -0.4
HOM6YJR139C SOL2P37262 315 aa12.56□□□□□ -0.4
HOM6YJR139C TRM7P38238 310 aaKnown RBP12.56□□□□□ -0.4
HOM6YJR139C YHR127WP38833 243 aaKnown RBP12.56□□□□□ -0.4
HOM6YJR139C AXL1P40851 1208 aa12.56□□□□□ -0.4
HOM6YJR139C GCV1P48015 400 aa12.56□□□□□ -0.4
HOM6YJR139C AIF1P52923 378 aa12.56□□□□□ -0.4
HOM6YJR139C SGF73P53165 657 aa12.56□□□□□ -0.4
HOM6YJR139C UBX4P54730 416 aa12.56□□□□□ -0.4
HOM6YJR139C RMI1Q02685 241 aa12.56□□□□□ -0.4
HOM6YJR139C FAR8Q05040 523 aa12.56□□□□□ -0.4
HOM6YJR139C YOR223WQ12015 292 aa12.56□□□□□ -0.4
HOM6YJR139C MCD1Q12158 566 aa12.56□□□□□ -0.4
HOM6YJR139C HSH49Q99181 213 aaPredicted RBP12.56□□□□□ -0.4
HOM6YJR139C HRP1Q99383 534 aaKnown RBP12.56□□□□□ -0.4
HOM6YJR139C YCK2P23292 546 aaKnown RBP12.55□□□□□ -0.4
HOM6YJR139C YCR090CP25654 182 aaKnown RBP12.55□□□□□ -0.4
HOM6YJR139C KIP2P28743 706 aa12.55□□□□□ -0.4
HOM6YJR139C MGM101P32787 269 aaKnown RBP12.55□□□□□ -0.4
HOM6YJR139C LTV1P34078 463 aa12.55□□□□□ -0.4
HOM6YJR139C NTR2P36118 322 aaPredicted RBP12.55□□□□□ -0.4
HOM6YJR139C NPT1P39683 429 aaKnown RBP12.55□□□□□ -0.4
HOM6YJR139C PFK26P40433 827 aaKnown RBP12.55□□□□□ -0.4
HOM6YJR139C COS12P53053 380 aa12.55□□□□□ -0.4
HOM6YJR139C NRM1P53718 249 aa12.55□□□□□ -0.4
HOM6YJR139C YNL058CP53947 316 aa12.55□□□□□ -0.4
HOM6YJR139C BCH1Q05029 724 aa12.55□□□□□ -0.4
HOM6YJR139C SEC10Q06245 871 aa12.55□□□□□ -0.4
HOM6YJR139C CSF1Q12150 2958 aa12.54□□□□□ -0.4
HOM6YJR139C HEM2P05373 342 aa12.54□□□□□ -0.4
HOM6YJR139C RSR1P13856 272 aa12.54□□□□□ -0.4
HOM6YJR139C RNQ1P25367 405 aa12.54□□□□□ -0.4
HOM6YJR139C SDH3P33421 198 aa12.54□□□□□ -0.4
HOM6YJR139C YKL100CP34248 587 aa12.54□□□□□ -0.4
HOM6YJR139C VRP1P37370 817 aa12.54□□□□□ -0.4
HOM6YJR139C RIM2P38127 377 aa12.54□□□□□ -0.4
HOM6YJR139C GIC1P38785 314 aa12.54□□□□□ -0.4
HOM6YJR139C PRM2P40534 656 aa12.54□□□□□ -0.4
HOM6YJR139C FAR3P46671 204 aa12.54□□□□□ -0.4
HOM6YJR139C STB2P46679 850 aa12.54□□□□□ -0.4
HOM6YJR139C PAN2P53010 1115 aaPredicted RBP12.54□□□□□ -0.4
HOM6YJR139C MPS2P53159 387 aa12.54□□□□□ -0.4
HOM6YJR139C NAM8Q00539 523 aaKnown RBP12.54□□□□□ -0.4
HOM6YJR139C RIF2Q06208 395 aa12.54□□□□□ -0.4
HOM6YJR139C NCA2Q12374 616 aa12.54□□□□□ -0.4
HOM6YJR139C YCR051WP25631 222 aa12.53□□□□□ -0.4
HOM6YJR139C PET309P32522 965 aaPredicted RBP12.53□□□□□ -0.4
HOM6YJR139C NRP1P32770 719 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
HOM6YJR139C PTH2P34222 208 aa12.53□□□□□ -0.4
HOM6YJR139C RRN3P36070 627 aa12.53□□□□□ -0.4
HOM6YJR139C INM1P38710 295 aa12.53□□□□□ -0.4
HOM6YJR139C YFR020WP43600 232 aa12.53□□□□□ -0.4
HOM6YJR139C EFM5P53200 248 aaKnown RBP12.53□□□□□ -0.4
HOM6YJR139C YGR015CP53208 328 aa12.53□□□□□ -0.4
HOM6YJR139C ARE2P53629 642 aaKnown RBP12.53□□□□□ -0.4
HOM6YJR139C RCF2P53721 224 aa12.53□□□□□ -0.4
HOM6YJR139C IBD2P53892 351 aa12.53□□□□□ -0.4
HOM6YJR139C SUL2Q12325 893 aa12.53□□□□□ -0.4
HOM6YJR139C NOP58Q12499 511 aaKnown RBP12.53□□□□□ -0.4
HOM6YJR139C MDM35O60200 86 aa12.52□□□□□ -0.41
HOM6YJR139C VAC17P25591 423 aa12.52□□□□□ -0.41
HOM6YJR139C MCM5P29496 775 aaKnown RBP12.52□□□□□ -0.41
HOM6YJR139C DOM34P33309 386 aa12.52□□□□□ -0.41
HOM6YJR139C LYS1P38998 373 aaRIP-Chip data12.52□□□□□ -0.41not detected
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms