RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	IMD2	P38697	523 aa	Known RBP	4.6	□□□□□ -1.67
SNL1	YIL016W	MSR1	P38714	643 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	CHS7	P38843	316 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	YJL055W	P47044	245 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	IMD3	P50095	523 aa	Known RBP	4.6	□□□□□ -1.67
SNL1	YIL016W	MNP1	P53163	194 aa	Predicted RBP	4.6	□□□□□ -1.67
SNL1	YIL016W	MEH1	Q02205	184 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	FIN1	Q03898	291 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	TMN2	Q04562	672 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	YDR286C	Q05530	114 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	VTA1	Q06263	330 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	GPM3	Q12326	303 aa		4.6	□□□□□ -1.67
SNL1	YIL016W	RAP1	P11938	827 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	PPH22	P23595	377 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	HXT3	P32466	567 aa	Known RBP	4.59	□□□□□ -1.67
SNL1	YIL016W	YBL055C	P34220	418 aa	Predicted RBP	4.59	□□□□□ -1.67
SNL1	YIL016W	MOH1	P38191	138 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	TSC10	P38342	320 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	ERV46	P39727	415 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	STB2	P46679	850 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	TCB2	P48231	1178 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	CAF130	P53280	1122 aa	Predicted RBP	4.59	□□□□□ -1.67
SNL1	YIL016W	BTN2	P53286	410 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	PDS5	Q04264	1277 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	ECM30	Q06673	1274 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	RTT109	Q07794	436 aa		4.59	□□□□□ -1.67
SNL1	YIL016W	MAK32	P23060	363 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	CPR2	P23285	205 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	RRP7	P25368	297 aa	Predicted RBP	4.58	□□□□□ -1.68
SNL1	YIL016W	MGM1	P32266	881 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	MSS51	P32335	436 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	ANP1	P32629	500 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	SEC66	P33754	206 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	HCS1	P34243	683 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	RPL32	P38061	130 aa	Known RBP	4.58	□□□□□ -1.68
SNL1	YIL016W	DBP8	P38719	431 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	YEL020C	P39994	560 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	SEC28	P40509	296 aa	Known RBP	4.58	□□□□□ -1.68
SNL1	YIL016W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SNL1	YIL016W	APT1	P49435	187 aa	Known RBP	4.58	□□□□□ -1.68
SNL1	YIL016W	ERG26	P53199	349 aa	Known RBP	4.58	□□□□□ -1.68
SNL1	YIL016W	PEX25	Q02969	394 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	CTF3	Q12748	733 aa		4.58	□□□□□ -1.68
SNL1	YIL016W	ELO2	P25358	347 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	BUD14	P27637	709 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	RML2	P32611	393 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	OAR1	P35731	278 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	NUP133	P36161	1157 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	FTH1	P38310	465 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	EFM4	P40516	257 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	CDC1	P40986	491 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	RSM23	Q01163	450 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	CTF4	Q01454	927 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	FMP30	Q02883	468 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	KAP120	Q02932	1032 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	YMR178W	Q03219	274 aa	Known RBP	4.57	□□□□□ -1.68
SNL1	YIL016W	COQ9	Q05779	260 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	YLR455W	Q06188	304 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	RPS10A	Q08745	105 aa	Predicted RBP	4.57	□□□□□ -1.68
SNL1	YIL016W	SPE3	Q12074	293 aa	Known RBP	4.57	□□□□□ -1.68
SNL1	YIL016W	YDL007C-A	Q2V2Q0	85 aa		4.57	□□□□□ -1.68
SNL1	YIL016W	KRS1	P15180	591 aa	Known RBP	4.56	□□□□□ -1.68
SNL1	YIL016W	SAC1	P32368	623 aa	Known RBP	4.56	□□□□□ -1.68
SNL1	YIL016W	TUL1	P36096	758 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	CIN1	P40987	1014 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	RPS10B	P46784	105 aa	Known RBP	4.56	□□□□□ -1.68
SNL1	YIL016W	SLI1	P53304	468 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	YTP1	P53584	459 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
SNL1	YIL016W	MSC1	Q03104	513 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	SNU56	Q03782	492 aa	Known RBP	4.56	□□□□□ -1.68
SNL1	YIL016W	SOV1	Q04748	898 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	PDR8	Q06149	701 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	CDC45	Q08032	650 aa		4.56	□□□□□ -1.68
SNL1	YIL016W	SMF3	Q12078	473 aa	Predicted RBP	4.56	□□□□□ -1.68
SNL1	YIL016W	RPN13	O13563	156 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	ARG81	P05085	880 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	GPA1	P08539	472 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	CLC1	P17891	233 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	GAC1	P28006	793 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	YME2	P32843	850 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	PXL1	P36166	706 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	YIL166C	P40445	542 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	CAK1	P43568	368 aa	Predicted RBP	4.55	□□□□□ -1.68
SNL1	YIL016W	STU2	P46675	888 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	ORC5	P50874	479 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	CUL3	P53202	744 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	YDL057W	Q07379	328 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	SIL1	Q08199	421 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	PGC1	Q08959	321 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	VPS54	Q12071	889 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	NFI1	Q12216	726 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	RDL1	Q12305	139 aa	Known RBP	4.55	□□□□□ -1.68
SNL1	YIL016W	FRE6	Q12473	712 aa		4.55	□□□□□ -1.68
SNL1	YIL016W	RPL31B	P0C2H9	113 aa	Known RBP	4.54	□□□□□ -1.68
SNL1	YIL016W	SPO11	P23179	398 aa		4.54	□□□□□ -1.68
SNL1	YIL016W	YKL100C	P34248	587 aa		4.54	□□□□□ -1.68
SNL1	YIL016W	RRT2	P38332	387 aa		4.54	□□□□□ -1.68
SNL1	YIL016W	CIN4	P39110	191 aa		4.54	□□□□□ -1.68
SNL1	YIL016W	NET1	P47035	1189 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms