RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C LYS14P40971 790 aa2.98□□□□□ -1.93
TCD1YHR003C BUD27P43573 796 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
TCD1YHR003C IRC8P47046 822 aa2.98□□□□□ -1.93
TCD1YHR003C DUO1P53168 247 aaKnown RBP2.98□□□□□ -1.93
TCD1YHR003C TIM11P81449 96 aaPredicted RBP2.98□□□□□ -1.93
TCD1YHR003C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
TCD1YHR003C RMT2Q03305 412 aa2.98□□□□□ -1.93
TCD1YHR003C ECM22Q05958 814 aaPredicted RBP2.98□□□□□ -1.93
TCD1YHR003C CUE5Q08412 411 aaKnown RBP2.98□□□□□ -1.93
TCD1YHR003C GRX6Q12438 231 aa2.98□□□□□ -1.93
TCD1YHR003C RRP36Q12481 300 aaPredicted RBP2.98□□□□□ -1.93
TCD1YHR003C PAR32Q12515 295 aaKnown RBP2.98□□□□□ -1.93
TCD1YHR003C PCD1Q12524 340 aa2.98□□□□□ -1.93
TCD1YHR003C CAT8P39113 1433 aa2.98□□□□□ -1.93
TCD1YHR003C YER190C-BP0CX94 160 aa2.97□□□□□ -1.93
TCD1YHR003C YEL077W-AP0CX95 160 aa2.97□□□□□ -1.93
TCD1YHR003C YGR296C-BP0CX96 160 aa2.97□□□□□ -1.93
TCD1YHR003C YPL283W-BP0CX97 160 aa2.97□□□□□ -1.93
TCD1YHR003C YPR204C-AP0CX98 160 aa2.97□□□□□ -1.93
TCD1YHR003C PWP1P21304 576 aaKnown RBP2.97□□□□□ -1.93
TCD1YHR003C RRP7P25368 297 aaPredicted RBP2.97□□□□□ -1.93
TCD1YHR003C SPB1P25582 841 aaPredicted RBP2.97□□□□□ -1.93
TCD1YHR003C MGM1P32266 881 aa2.97□□□□□ -1.93
TCD1YHR003C FLC2P39719 783 aa2.97□□□□□ -1.93
TCD1YHR003C PCL7P40186 285 aa2.97□□□□□ -1.93
TCD1YHR003C RPT6Q01939 405 aaKnown RBP2.97□□□□□ -1.93
TCD1YHR003C RCO1Q04779 684 aa2.97□□□□□ -1.93
TCD1YHR003C MLH2Q07980 695 aa2.97□□□□□ -1.93
TCD1YHR003C APL4Q12028 832 aa2.97□□□□□ -1.93
TCD1YHR003C HUA2Q12134 243 aa2.97□□□□□ -1.93
TCD1YHR003C GET3Q12154 354 aaKnown RBP2.97□□□□□ -1.93
TCD1YHR003C NBP2Q12163 236 aa2.97□□□□□ -1.93
TCD1YHR003C NFI1Q12216 726 aa2.97□□□□□ -1.93
TCD1YHR003C PDH1Q12428 516 aaKnown RBP2.97□□□□□ -1.93
TCD1YHR003C SKM1Q12469 655 aa2.97□□□□□ -1.93
TCD1YHR003C ILV2P07342 687 aaKnown RBP2.96□□□□□ -1.94
TCD1YHR003C CDC24P11433 854 aaPredicted RBP2.96□□□□□ -1.94
TCD1YHR003C OCA4P25366 362 aa2.96□□□□□ -1.94
TCD1YHR003C PTC6P25646 442 aa2.96□□□□□ -1.94
TCD1YHR003C YUR1P26725 428 aa2.96□□□□□ -1.94
TCD1YHR003C POT1P27796 417 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
TCD1YHR003C GPI10P30777 616 aa2.96□□□□□ -1.94
TCD1YHR003C LAS1P36146 502 aaPredicted RBP2.96□□□□□ -1.94
TCD1YHR003C RFC1P38630 861 aaKnown RBP2.96□□□□□ -1.94
TCD1YHR003C ERC1P38767 581 aa2.96□□□□□ -1.94
TCD1YHR003C TOM71P38825 639 aaKnown RBP2.96□□□□□ -1.94
TCD1YHR003C RTT105P40063 208 aa2.96□□□□□ -1.94
TCD1YHR003C DOT5P40553 215 aa2.96□□□□□ -1.94
TCD1YHR003C ROK1P45818 564 aaPredicted RBP2.96□□□□□ -1.94
TCD1YHR003C EAF6P47128 113 aa2.96□□□□□ -1.94
TCD1YHR003C MRX6P48564 524 aa2.96□□□□□ -1.94
TCD1YHR003C ORC5P50874 479 aa2.96□□□□□ -1.94
TCD1YHR003C HST1P53685 503 aa2.96□□□□□ -1.94
TCD1YHR003C JJJ1P53863 590 aa2.96□□□□□ -1.94
TCD1YHR003C VTC3Q02725 835 aa2.96□□□□□ -1.94
TCD1YHR003C OAZ1Q02803 292 aa2.96□□□□□ -1.94
TCD1YHR003C YPL108WQ02872 168 aaPredicted RBP2.96□□□□□ -1.94
TCD1YHR003C CDC45Q08032 650 aa2.96□□□□□ -1.94
TCD1YHR003C CTI6Q08923 506 aa2.96□□□□□ -1.94
TCD1YHR003C SGT2Q12118 346 aaKnown RBP2.96□□□□□ -1.94
TCD1YHR003C HER1Q12276 1246 aa2.96□□□□□ -1.94
TCD1YHR003C YBR126W-AQ8TGU7 68 aa2.96□□□□□ -1.94
TCD1YHR003C YLR278CQ05854 1341 aa2.95□□□□□ -1.94
TCD1YHR003C GEA1P47102 1408 aaPredicted RBP2.95□□□□□ -1.94
TCD1YHR003C ADE3P07245 946 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C RPC40P07703 335 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C RPB2P08518 1224 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C SUI3P09064 285 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C RIT1P23796 513 aa2.95□□□□□ -1.94
TCD1YHR003C SWI4P25302 1093 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C DAL80P26343 269 aa2.95□□□□□ -1.94
TCD1YHR003C ARP2P32381 391 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C GSH1P32477 678 aa2.95□□□□□ -1.94
TCD1YHR003C IME2P32581 645 aa2.95□□□□□ -1.94
TCD1YHR003C TFB1P32776 642 aa2.95□□□□□ -1.94
TCD1YHR003C GCS1P35197 352 aa2.95□□□□□ -1.94
TCD1YHR003C FLO5P38894 1075 aa2.95□□□□□ -1.94
TCD1YHR003C VPS41P38959 992 aa2.95□□□□□ -1.94
TCD1YHR003C ERV46P39727 415 aa2.95□□□□□ -1.94
TCD1YHR003C CAB2P40506 365 aa2.95□□□□□ -1.94
TCD1YHR003C NAS2P40555 220 aa2.95□□□□□ -1.94
TCD1YHR003C MDE1P47095 244 aa2.95□□□□□ -1.94
TCD1YHR003C NPA3P47122 385 aa2.95□□□□□ -1.94
TCD1YHR003C SCS3P53012 380 aa2.95□□□□□ -1.94
TCD1YHR003C SHE10P53075 577 aa2.95□□□□□ -1.94
TCD1YHR003C SGF73P53165 657 aa2.95□□□□□ -1.94
TCD1YHR003C CSL4P53859 292 aaPredicted RBP2.95□□□□□ -1.94
TCD1YHR003C EOS1P53938 366 aa2.95□□□□□ -1.94
TCD1YHR003C RPL15BP54780 204 aaPredicted RBP2.95□□□□□ -1.94
TCD1YHR003C ERV25P54837 211 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C YSA1Q01976 231 aa2.95□□□□□ -1.94
TCD1YHR003C YPL107WQ02873 248 aa2.95□□□□□ -1.94
TCD1YHR003C MGR3Q04472 501 aa2.95□□□□□ -1.94
TCD1YHR003C DPB4Q04603 196 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C RNH1Q04740 348 aa2.95□□□□□ -1.94
TCD1YHR003C HEL2Q05580 639 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C APL5Q08951 932 aaKnown RBP2.95□□□□□ -1.94
TCD1YHR003C LEA1Q08963 238 aaPredicted RBP2.95□□□□□ -1.94
TCD1YHR003C KEL3Q08979 651 aaPredicted RBP2.95□□□□□ -1.94
TCD1YHR003C ICL2Q12031 575 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms