RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SWP82P43554 623 aa1.64□□□□□ -2.15
YCK3YER123W RPN11P43588 306 aaKnown RBP1.64□□□□□ -2.15
YCK3YER123W YFR020WP43600 232 aa1.64□□□□□ -2.15
YCK3YER123W ASE1P50275 885 aa1.64□□□□□ -2.15
YCK3YER123W RSM28Q03430 361 aa1.64□□□□□ -2.15
YCK3YER123W PRP8P33334 2413 aaKnown RBP1.63□□□□□ -2.15
YCK3YER123W POL1P13382 1468 aa1.63□□□□□ -2.15
YCK3YER123W SMC4Q12267 1418 aa1.63□□□□□ -2.15
YCK3YER123W POM152P39685 1337 aa1.63□□□□□ -2.15
YCK3YER123W PTP2P29461 750 aa1.63□□□□□ -2.15
YCK3YER123W TFC3P34111 1160 aa1.63□□□□□ -2.15
YCK3YER123W ERG7P38604 731 aa1.63□□□□□ -2.15
YCK3YER123W RRP3P38712 501 aaKnown RBP1.63□□□□□ -2.15
YCK3YER123W RGI2P40188 164 aa1.63□□□□□ -2.15
YCK3YER123W YJL068CP40363 299 aa1.63□□□□□ -2.15
YCK3YER123W DIM1P41819 318 aaKnown RBP1.63□□□□□ -2.15
YCK3YER123W LYS4P49367 693 aaPredicted RBP1.63□□□□□ -2.15
YCK3YER123W CSL4P53859 292 aaPredicted RBP1.63□□□□□ -2.15
YCK3YER123W SNQ2P32568 1501 aaKnown RBP1.62□□□□□ -2.15
YCK3YER123W TY2A-LR1P0C2J4 438 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-FP0CX61 438 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-GR2P0CX62 438 aa1.62□□□□□ -2.15
YCK3YER123W NCP1P16603 691 aaKnown RBP1.62□□□□□ -2.15
YCK3YER123W TY2A-CP25383 438 aa1.62□□□□□ -2.15
YCK3YER123W GAC1P28006 793 aa1.62□□□□□ -2.15
YCK3YER123W ERG1P32476 496 aaKnown RBP1.62□□□□□ -2.15
YCK3YER123W SRB5P32585 307 aa1.62□□□□□ -2.15
YCK3YER123W MIA40P36046 403 aa1.62□□□□□ -2.15
YCK3YER123W ESL2P36168 1195 aa1.62□□□□□ -2.15
YCK3YER123W NPR3P38742 1146 aa1.62□□□□□ -2.15
YCK3YER123W PHO90P39535 881 aa1.62□□□□□ -2.15
YCK3YER123W YIL060WP40519 144 aa1.62□□□□□ -2.15
YCK3YER123W YJL132WP47014 750 aa1.62□□□□□ -2.15
YCK3YER123W COG1P53079 417 aa1.62□□□□□ -2.15
YCK3YER123W NNF2P53253 936 aa1.62□□□□□ -2.15
YCK3YER123W IST1P53843 298 aaPredicted RBP1.62□□□□□ -2.15
YCK3YER123W NUP100Q02629 959 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-DR2Q03483 438 aa1.62□□□□□ -2.15
YCK3YER123W TMA64Q04600 565 aaKnown RBP1.62□□□□□ -2.15
YCK3YER123W TMA16Q08687 178 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-BQ12260 438 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-OR2Q12293 438 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-DR1Q12392 438 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-OR1Q12439 438 aa1.62□□□□□ -2.15
YCK3YER123W TY2A-DR3Q99303 438 aa1.62□□□□□ -2.15
YCK3YER123W HXK2P04807 486 aaKnown RBP1.61□□□□□ -2.15
YCK3YER123W TPK1P06244 397 aa1.61□□□□□ -2.15
YCK3YER123W PHO81P17442 1178 aa1.61□□□□□ -2.15
YCK3YER123W CDC15P27636 974 aa1.61□□□□□ -2.15
YCK3YER123W PHD1P36093 366 aa1.61□□□□□ -2.15
YCK3YER123W PSF2P40359 213 aa1.61□□□□□ -2.15
YCK3YER123W PKP1P40530 394 aa1.61□□□□□ -2.15
YCK3YER123W GUF1P46943 645 aa1.61□□□□□ -2.15
YCK3YER123W PKP2P53170 491 aa1.61□□□□□ -2.15
YCK3YER123W CSR1Q06705 408 aaKnown RBP1.61□□□□□ -2.15
YCK3YER123W COX17Q12287 69 aa1.61□□□□□ -2.15
YCK3YER123W SEN1Q00416 2231 aaKnown RBP1.61□□□□□ -2.15
YCK3YER123W YLR278CQ05854 1341 aa1.6□□□□□ -2.15
YCK3YER123W IRA1P18963 3092 aa1.6□□□□□ -2.15
YCK3YER123W ATP4P05626 244 aa1.6□□□□□ -2.15
YCK3YER123W MRS3P10566 314 aa1.6□□□□□ -2.15
YCK3YER123W NAT1P12945 854 aaKnown RBP1.6□□□□□ -2.15
YCK3YER123W YCL049CP25577 312 aa1.6□□□□□ -2.15
YCK3YER123W MCM4P30665 933 aaKnown RBP1.6□□□□□ -2.15
YCK3YER123W SPC34P36131 295 aa1.6□□□□□ -2.15
YCK3YER123W GRX7P38068 203 aa1.6□□□□□ -2.15
YCK3YER123W YHL041WP38730 149 aa1.6□□□□□ -2.15
YCK3YER123W PFK26P40433 827 aaKnown RBP1.6□□□□□ -2.15
YCK3YER123W SMK1P41808 388 aa1.6□□□□□ -2.15
YCK3YER123W CTF18P49956 741 aa1.6□□□□□ -2.15
YCK3YER123W ATG26Q06321 1198 aa1.6□□□□□ -2.15
YCK3YER123W ERG27Q12452 347 aaKnown RBP1.6□□□□□ -2.15
YCK3YER123W URB1P34241 1764 aaKnown RBP1.6□□□□□ -2.15
YCK3YER123W RRP5Q05022 1729 aaKnown RBP1.6□□□□□ -2.15
YCK3YER123W SOD1P00445 154 aaKnown RBP1.59□□□□□ -2.15
YCK3YER123W YEF3P16521 1044 aaKnown RBP1.59□□□□□ -2.15
YCK3YER123W RAD16P31244 790 aa1.59□□□□□ -2.15
YCK3YER123W YEL045CP32616 141 aa1.59□□□□□ -2.15
YCK3YER123W YBP1P38315 674 aa1.59□□□□□ -2.15
YCK3YER123W IST3P40565 148 aaPredicted RBP1.59□□□□□ -2.15
YCK3YER123W SMC3P47037 1230 aa1.59□□□□□ -2.15
YCK3YER123W YDL186WP48568 277 aa1.59□□□□□ -2.15
YCK3YER123W SOL4P53315 255 aa1.59□□□□□ -2.15
YCK3YER123W PAP2P53632 584 aaKnown RBP1.59□□□□□ -2.15
YCK3YER123W MSS11Q03825 758 aa1.59□□□□□ -2.15
YCK3YER123W FMP45Q07651 309 aa1.59□□□□□ -2.15
YCK3YER123W YEH2Q07950 538 aa1.59□□□□□ -2.15
YCK3YER123W YOL057WQ08225 711 aa1.59□□□□□ -2.15
YCK3YER123W RDR1Q08904 546 aa1.59□□□□□ -2.15
YCK3YER123W APL4Q12028 832 aa1.59□□□□□ -2.15
YCK3YER123W ARP6Q12509 438 aa1.59□□□□□ -2.15
YCK3YER123W VCX1Q99385 411 aa1.59□□□□□ -2.15
YCK3YER123W SNF2P22082 1703 aa1.59□□□□□ -2.15
YCK3YER123W FKS3Q04952 1785 aa1.59□□□□□ -2.16
YCK3YER123W TYR1P20049 452 aa1.59□□□□□ -2.16
YCK3YER123W LCB1P25045 558 aaKnown RBP1.59□□□□□ -2.16
YCK3YER123W ACH1P32316 526 aa1.59□□□□□ -2.16
YCK3YER123W YKL050CP35736 922 aa1.59□□□□□ -2.16
YCK3YER123W YER130CP39959 443 aa1.59□□□□□ -2.16
YCK3YER123W DPB11P47027 764 aaPredicted RBP1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms