RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPP1B	YDL130W	POL2	P21951	2222 aa	Known RBP	15.28	■□□□□ 0.04
RPP1B	YDL130W	PHA2	P32452	334 aa		15.28	■□□□□ 0.04
RPP1B	YDL130W	ASK1	P35734	292 aa		15.28	■□□□□ 0.04
RPP1B	YDL130W	UBA4	P38820	440 aa		15.28	■□□□□ 0.04
RPP1B	YDL130W	NRM1	P53718	249 aa		15.28	■□□□□ 0.04
RPP1B	YDL130W	GPR1	Q12361	961 aa		15.28	■□□□□ 0.04
RPP1B	YDL130W	COX6	P00427	148 aa		15.27	■□□□□ 0.04
RPP1B	YDL130W	CDC21	P06785	304 aa		15.27	■□□□□ 0.04
RPP1B	YDL130W	SPT16	P32558	1035 aa	Known RBP	15.27	■□□□□ 0.04
RPP1B	YDL130W	MUD2	P36084	527 aa	Known RBP	15.27	■□□□□ 0.04
RPP1B	YDL130W	NTR2	P36118	322 aa	Predicted RBP	15.27	■□□□□ 0.04
RPP1B	YDL130W	TRM7	P38238	310 aa	Known RBP	15.27	■□□□□ 0.04
RPP1B	YDL130W	GIC1	P38785	314 aa		15.27	■□□□□ 0.04
RPP1B	YDL130W	PST1	Q12355	444 aa		15.27	■□□□□ 0.04
RPP1B	YDL130W	RSR1	P13856	272 aa		15.26	■□□□□ 0.03
RPP1B	YDL130W	MET8	P15807	274 aa		15.26	■□□□□ 0.03
RPP1B	YDL130W	DOM34	P33309	386 aa		15.26	■□□□□ 0.03
RPP1B	YDL130W	BNI4	P53858	892 aa		15.26	■□□□□ 0.03
RPP1B	YDL130W	YDR056C	Q12025	205 aa		15.26	■□□□□ 0.03
RPP1B	YDL130W	AAD3	P25612	363 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	YKL100C	P34248	587 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	YBR238C	P38330	731 aa	Known RBP	15.25	■□□□□ 0.03
RPP1B	YDL130W	YHR127W	P38833	243 aa	Known RBP	15.25	■□□□□ 0.03
RPP1B	YDL130W	MGS1	P40151	587 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	TIS11	P47977	285 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	MPS2	P53159	387 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	YDR262W	Q12331	272 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	STB3	Q12427	513 aa		15.25	■□□□□ 0.03
RPP1B	YDL130W	HRP1	Q99383	534 aa	Known RBP	15.25	■□□□□ 0.03
RPP1B	YDL130W	CLN2	P20438	545 aa		15.24	■□□□□ 0.03
RPP1B	YDL130W	RNQ1	P25367	405 aa		15.24	■□□□□ 0.03
RPP1B	YDL130W	OAF3	P36023	863 aa		15.24	■□□□□ 0.03
RPP1B	YDL130W	PHO89	P38361	574 aa		15.24	■□□□□ 0.03
RPP1B	YDL130W	RHO3	Q00245	231 aa	Known RBP	15.24	■□□□□ 0.03
RPP1B	YDL130W	AAT1	Q01802	451 aa		15.24	■□□□□ 0.03
RPP1B	YDL130W	RNY1	Q02933	434 aa	Known RBP	15.24	■□□□□ 0.03
RPP1B	YDL130W	BCH1	Q05029	724 aa		15.24	■□□□□ 0.03
RPP1B	YDL130W	CDC13	P32797	924 aa	Known RBP	15.23	■□□□□ 0.03
RPP1B	YDL130W	UME6	P39001	836 aa		15.23	■□□□□ 0.03
RPP1B	YDL130W	NPT1	P39683	429 aa	Known RBP	15.23	■□□□□ 0.03
RPP1B	YDL130W	COS12	P53053	380 aa		15.23	■□□□□ 0.03
RPP1B	YDL130W	YNL058C	P53947	316 aa		15.23	■□□□□ 0.03
RPP1B	YDL130W	YMR155W	Q03795	547 aa		15.23	■□□□□ 0.03
RPP1B	YDL130W	VAM6	Q07468	1049 aa		15.23	■□□□□ 0.03
RPP1B	YDL130W	HEM2	P05373	342 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	PRP16	P15938	1071 aa	Predicted RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	YCK2	P23292	546 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	KIP2	P28743	706 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	PET309	P32522	965 aa	Predicted RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	MGM101	P32787	269 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	SKT5	P34226	696 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	YHR033W	P38690	423 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	LYS1	P38998	373 aa	RIP-Chip data	15.22	■□□□□ 0.03	not detected
RPP1B	YDL130W	DHH1	P39517	506 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	LIA1	P47120	325 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	GCV1	P48015	400 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	SGF73	P53165	657 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	YGR015C	P53208	328 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	ARE2	P53629	642 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	IST1	P53843	298 aa	Predicted RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	CTK1	Q03957	528 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	TDA5	Q06417	326 aa	Known RBP	15.22	■□□□□ 0.03
RPP1B	YDL130W	SUL2	Q12325	893 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	SKM1	Q12469	655 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	YPL247C	Q12523	523 aa		15.22	■□□□□ 0.03
RPP1B	YDL130W	GAL4	P04386	881 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	NUP120	P35729	1037 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	EMC3	P36039	253 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	SOL2	P37262	315 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	RIM11	P38615	370 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	AXL1	P40851	1208 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	YRB1	P41920	201 aa	Known RBP	15.21	■□□□□ 0.03
RPP1B	YDL130W	STP3	Q05937	343 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	SEC10	Q06245	871 aa		15.21	■□□□□ 0.03
RPP1B	YDL130W	YCR090C	P25654	182 aa	Known RBP	15.2	■□□□□ 0.02
RPP1B	YDL130W	LEU5	P38702	357 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	INM1	P38710	295 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	LIN1	P38852	340 aa	Predicted RBP	15.2	■□□□□ 0.02
RPP1B	YDL130W	LRO1	P40345	661 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	YJR149W	P47177	404 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	RCF2	P53721	224 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	RNT1	Q02555	471 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	RMI1	Q02685	241 aa		15.2	■□□□□ 0.02
RPP1B	YDL130W	RUD3	Q12234	484 aa	Known RBP	15.2	■□□□□ 0.02
RPP1B	YDL130W	RRP12	Q12754	1228 aa	Known RBP	15.2	■□□□□ 0.02
RPP1B	YDL130W	MEI5	P32489	222 aa		15.19	■□□□□ 0.02
RPP1B	YDL130W	SHY1	P53266	389 aa		15.19	■□□□□ 0.02
RPP1B	YDL130W	YMR034C	Q05131	434 aa	Predicted RBP	15.19	■□□□□ 0.02
RPP1B	YDL130W	CMR1	Q12510	522 aa	Known RBP	15.19	■□□□□ 0.02
RPP1B	YDL130W	YKL068W-A	Q3E826	78 aa		15.19	■□□□□ 0.02
RPP1B	YDL130W	SRV2	P17555	526 aa	Known RBP	15.18	■□□□□ 0.02
RPP1B	YDL130W	ARG1	P22768	420 aa		15.18	■□□□□ 0.02
RPP1B	YDL130W	SKN1	P33336	771 aa		15.18	■□□□□ 0.02
RPP1B	YDL130W	SDH3	P33421	198 aa		15.18	■□□□□ 0.02
RPP1B	YDL130W	YER034W	P40022	185 aa	Known RBP	15.18	■□□□□ 0.02
RPP1B	YDL130W	YFR020W	P43600	232 aa		15.18	■□□□□ 0.02
RPP1B	YDL130W	FAR3	P46671	204 aa		15.18	■□□□□ 0.02
RPP1B	YDL130W	MDM34	P53083	459 aa		15.18	■□□□□ 0.02
RPP1B	YDL130W	EFM5	P53200	248 aa	Known RBP	15.18	■□□□□ 0.02
RPP1B	YDL130W	SFH1	Q06168	426 aa		15.18	■□□□□ 0.02

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms