RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 PfasQ5SUR0 1337 aa9.16□□□□□ -0.94
Syne1-202ENSMUST00000095899 Col1a1P11087 1453 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Grem2O88273 168 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Spg7Q3ULF4 781 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Tnni3kQ5GIG6 834 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Znf532Q6NXK2 1036 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Tcp11l2Q8K1H7 517 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Fbxo18Q8K2I9 1042 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Tmem39aQ9CYC3 486 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Krtap5-3Q9D226 196 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Lcmt1A0A0U1RNF2 332 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Api5O35841 504 aaKnown RBP9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Vcam1P29533 739 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Fhdc1Q3ULZ2 1149 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Mdh1bQ5F204 500 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Cep131Q62036 1060 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Apol10aQ8CCA5 318 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Col2a1P28481 1487 aa9.15□□□□□ -0.94
Syne1-202ENSMUST00000095899 Krt78E9Q0F0 1068 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Vmn2r71L7N2D8 855 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Adam7O35227 789 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Tnfaip8l3Q3TBL6 204 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Prom2Q3UUY6 835 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 AcrbpQ3V140 540 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 AsnsQ61024 561 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ezh2Q61188 746 aaKnown RBP9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Nell2Q61220 819 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Mxd3Q80US8 206 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Skor1Q8BX46 964 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Col23a1Q8K4G2 532 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Gnl2Q99LH1 728 aaKnown RBP9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Klhl40Q9D783 621 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Tfap4Q9JIZ5 338 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Git2Q9JLQ2 708 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ptf1aQ9QX98 324 aa9.15□□□□□ -0.95
Syne1-202ENSMUST00000095899 Palm3A2TJV2 734 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Trim43cP86449 446 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Jdp2P97875 163 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 CtcfQ61164 736 aaKnown RBP9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Trmt2aQ8BNV1 574 aaKnown RBP9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 UvssaQ9D479 717 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 March8Q9DBD2 286 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Arl6ip4Q9JM93 229 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Clip2Q9Z0H8 1047 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Tspoap1Q7TNF8 1846 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Paxbp1P58501 919 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Gja5Q01231 358 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Arhgef2Q60875 985 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Clca4aQ6Q473 924 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Tmem63cQ8CBX0 802 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Q8CEZ4 452 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Fermt2Q8CIB5 680 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Inpp4aQ9EPW0 939 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Chaf1aQ9QWF0 911 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Cyp26c1B2RXA7 518 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Arid4aF8VPQ2 1261 aaKnown RBP9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Nfil3O08750 462 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 EgfrQ01279 1210 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Rasgrp4Q8BTM9 673 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 NkrfQ8BY02 690 aaKnown RBP9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Phc3Q8CHP6 981 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Nat10Q8K224 1024 aaKnown RBP9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ppp2r5dQ91V89 594 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Alpk1Q9CXB8 1231 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Akap8Q9DBR0 687 aaKnown RBP9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Copb1Q9JIF7 953 aa9.14□□□□□ -0.95
Syne1-202ENSMUST00000095899 Tpp1O89023 562 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Eya3P97480 510 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Lrrc55Q3UY51 311 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ccna1Q61456 421 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Tacc1Q6Y685 774 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ankrd13aQ80UP5 588 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Arhgef19Q8BWA8 802 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 NelfbQ8C4Y3 580 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Sash3Q8K352 380 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Rbm19Q8R3C6 952 aaKnown RBP9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Dnajc7Q9QYI3 494 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 EcsitQ9QZH6 435 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Gm7356A0A087WSA6 508 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Armc3A2AU72 881 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Rexo5D3YW29 759 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Nr1i2O54915 431 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Gdf10P97737 476 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Anp32eP97822 260 aaKnown RBP9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Krt86P97861 486 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Fbln1Q08879 705 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 VrtnQ3SYK4 740 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ell2Q3UKU1 639 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Ncoa7Q6DFV7 943 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Igdcc3Q8BQC3 813 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 MtrrQ8C1A3 696 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Trim9Q8C7M3 817 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Mtmr4Q91XS1 1190 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Brms1Q99N20 246 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Pex3Q9QXY9 372 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Cacna1fQ9JIS7 1985 aa9.13□□□□□ -0.95
Syne1-202ENSMUST00000095899 Gm4985A2ALC6 410 aa9.12□□□□□ -0.95
Syne1-202ENSMUST00000095899 PurbO35295 324 aaKnown RBP9.12□□□□□ -0.95
Syne1-202ENSMUST00000095899 Pak1O88643 545 aa9.12□□□□□ -0.95
Syne1-202ENSMUST00000095899 Nkx2-5P42582 318 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms