Protein–RNA interactions for Protein: Q8CHP6

Phc3, Polyhomeotic-like protein 3, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phc3Q8CHP6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Phc3Q8CHP6 Gm25239-201ENSMUST00000174915 86 ntBASIC37.06■■■■□ 3.52
Phc3Q8CHP6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.76■■■■□ 3.32
Phc3Q8CHP6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Phc3Q8CHP6 Psd-208ENSMUST00000224556 2034 ntBASIC34.88■■■■□ 3.17
Phc3Q8CHP6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Phc3Q8CHP6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Phc3Q8CHP6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Phc3Q8CHP6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Phc3Q8CHP6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Phc3Q8CHP6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Phc3Q8CHP6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
Phc3Q8CHP6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Phc3Q8CHP6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Phc3Q8CHP6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Phc3Q8CHP6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.88■■■□□ 2.85
Phc3Q8CHP6 Gm15042-201ENSMUST00000120212 883 ntBASIC32.85■■■□□ 2.85
Phc3Q8CHP6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Phc3Q8CHP6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Phc3Q8CHP6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Phc3Q8CHP6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Phc3Q8CHP6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.41■■■□□ 2.78
Phc3Q8CHP6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
Phc3Q8CHP6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Phc3Q8CHP6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
Phc3Q8CHP6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Phc3Q8CHP6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Phc3Q8CHP6 Gm24109-201ENSMUST00000175489 103 ntBASIC31.98■■■□□ 2.71
Phc3Q8CHP6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Phc3Q8CHP6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Phc3Q8CHP6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.83■■■□□ 2.69
Phc3Q8CHP6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
Phc3Q8CHP6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.74■■■□□ 2.67
Phc3Q8CHP6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Phc3Q8CHP6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Phc3Q8CHP6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.65■■■□□ 2.66
Phc3Q8CHP6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Phc3Q8CHP6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Phc3Q8CHP6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.44■■■□□ 2.62
Phc3Q8CHP6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Phc3Q8CHP6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Phc3Q8CHP6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Phc3Q8CHP6 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.29■■■□□ 2.6
Phc3Q8CHP6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Phc3Q8CHP6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Phc3Q8CHP6 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.11■■■□□ 2.57
Phc3Q8CHP6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Phc3Q8CHP6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Phc3Q8CHP6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Phc3Q8CHP6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.02■■■□□ 2.56
Phc3Q8CHP6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Phc3Q8CHP6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Phc3Q8CHP6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.95■■■□□ 2.55
Phc3Q8CHP6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Phc3Q8CHP6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Phc3Q8CHP6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Phc3Q8CHP6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Phc3Q8CHP6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Phc3Q8CHP6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Phc3Q8CHP6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Phc3Q8CHP6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Phc3Q8CHP6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Phc3Q8CHP6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Phc3Q8CHP6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Phc3Q8CHP6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Phc3Q8CHP6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.4■■■□□ 2.46
Phc3Q8CHP6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Phc3Q8CHP6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
Phc3Q8CHP6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Phc3Q8CHP6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.21■■■□□ 2.43
Phc3Q8CHP6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Phc3Q8CHP6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Phc3Q8CHP6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Phc3Q8CHP6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Phc3Q8CHP6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Phc3Q8CHP6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Phc3Q8CHP6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Phc3Q8CHP6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Phc3Q8CHP6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Phc3Q8CHP6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Phc3Q8CHP6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Phc3Q8CHP6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Phc3Q8CHP6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Phc3Q8CHP6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
Phc3Q8CHP6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Phc3Q8CHP6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Phc3Q8CHP6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Phc3Q8CHP6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Phc3Q8CHP6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.64■■■□□ 2.34
Phc3Q8CHP6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Phc3Q8CHP6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Phc3Q8CHP6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Phc3Q8CHP6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.46■■■□□ 2.31
Phc3Q8CHP6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Phc3Q8CHP6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Phc3Q8CHP6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
Phc3Q8CHP6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Phc3Q8CHP6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Phc3Q8CHP6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
Phc3Q8CHP6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms