Protein–RNA interactions for Protein: Q61456

Ccna1, Cyclin-A1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccna1Q61456 Gm25239-201ENSMUST00000174915 86 ntBASIC41.52■■■■■ 4.24
Ccna1Q61456 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
Ccna1Q61456 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
Ccna1Q61456 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Ccna1Q61456 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Ccna1Q61456 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.14■■■■□ 3.54
Ccna1Q61456 Gm15042-201ENSMUST00000120212 883 ntBASIC36.78■■■■□ 3.48
Ccna1Q61456 Gm15045-201ENSMUST00000117359 883 ntBASIC36.09■■■■□ 3.37
Ccna1Q61456 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ccna1Q61456 Gm24109-201ENSMUST00000175489 103 ntBASIC35.78■■■■□ 3.32
Ccna1Q61456 Psd-208ENSMUST00000224556 2034 ntBASIC35.69■■■■□ 3.3
Ccna1Q61456 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Ccna1Q61456 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.21■■■■□ 3.23
Ccna1Q61456 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
Ccna1Q61456 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Ccna1Q61456 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Ccna1Q61456 Gm23366-201ENSMUST00000175022 89 ntBASIC34.72■■■■□ 3.15
Ccna1Q61456 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
Ccna1Q61456 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Ccna1Q61456 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Ccna1Q61456 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Ccna1Q61456 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Ccna1Q61456 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ccna1Q61456 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ccna1Q61456 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ccna1Q61456 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ccna1Q61456 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.32■■■■□ 3.08
Ccna1Q61456 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ccna1Q61456 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Ccna1Q61456 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Ccna1Q61456 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Ccna1Q61456 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.89■■■■□ 3.02
Ccna1Q61456 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.83■■■■□ 3.01
Ccna1Q61456 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
Ccna1Q61456 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.75■■■□□ 2.99
Ccna1Q61456 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ccna1Q61456 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Ccna1Q61456 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Ccna1Q61456 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ccna1Q61456 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ccna1Q61456 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.26■■■□□ 2.92
Ccna1Q61456 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Ccna1Q61456 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.07■■■□□ 2.88
Ccna1Q61456 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.99■■■□□ 2.87
Ccna1Q61456 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ccna1Q61456 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ccna1Q61456 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.84■■■□□ 2.85
Ccna1Q61456 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ccna1Q61456 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ccna1Q61456 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ccna1Q61456 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ccna1Q61456 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Ccna1Q61456 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.67■■■□□ 2.82
Ccna1Q61456 Gm25238-201ENSMUST00000174914 89 ntBASIC32.62■■■□□ 2.81
Ccna1Q61456 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ccna1Q61456 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccna1Q61456 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccna1Q61456 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.47■■■□□ 2.79
Ccna1Q61456 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Ccna1Q61456 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Ccna1Q61456 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccna1Q61456 Gm27325-201ENSMUST00000175467 74 ntBASIC32.34■■■□□ 2.77
Ccna1Q61456 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccna1Q61456 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.28■■■□□ 2.76
Ccna1Q61456 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccna1Q61456 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.24■■■□□ 2.75
Ccna1Q61456 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.22■■■□□ 2.75
Ccna1Q61456 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
Ccna1Q61456 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ccna1Q61456 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.15■■■□□ 2.74
Ccna1Q61456 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.15■■■□□ 2.74
Ccna1Q61456 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Ccna1Q61456 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
Ccna1Q61456 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccna1Q61456 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccna1Q61456 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccna1Q61456 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccna1Q61456 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.78■■■□□ 2.68
Ccna1Q61456 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.68■■■□□ 2.66
Ccna1Q61456 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.67■■■□□ 2.66
Ccna1Q61456 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccna1Q61456 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.61■■■□□ 2.65
Ccna1Q61456 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccna1Q61456 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccna1Q61456 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccna1Q61456 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Ccna1Q61456 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ccna1Q61456 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ccna1Q61456 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ccna1Q61456 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Ccna1Q61456 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ccna1Q61456 Rab21-202ENSMUST00000218831 843 ntBASIC31.39■■■□□ 2.62
Ccna1Q61456 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
Ccna1Q61456 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Ccna1Q61456 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccna1Q61456 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ccna1Q61456 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccna1Q61456 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ccna1Q61456 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ccna1Q61456 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.28■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 147.6 ms