Protein–RNA interactions for Protein: Q3UY51

Lrrc55, Leucine-rich repeat-containing protein 55, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc55Q3UY51 Gm25239-201ENSMUST00000174915 86 ntBASIC42.79■■■■■ 4.44
Lrrc55Q3UY51 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Lrrc55Q3UY51 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Lrrc55Q3UY51 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Lrrc55Q3UY51 Gm24109-201ENSMUST00000175489 103 ntBASIC37.25■■■■□ 3.55
Lrrc55Q3UY51 Gm15042-201ENSMUST00000120212 883 ntBASIC37.05■■■■□ 3.52
Lrrc55Q3UY51 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
Lrrc55Q3UY51 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.62■■■■□ 3.45
Lrrc55Q3UY51 Gm15045-201ENSMUST00000117359 883 ntBASIC36.22■■■■□ 3.39
Lrrc55Q3UY51 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
Lrrc55Q3UY51 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Lrrc55Q3UY51 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Lrrc55Q3UY51 Gm23366-201ENSMUST00000175022 89 ntBASIC35.66■■■■□ 3.3
Lrrc55Q3UY51 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Lrrc55Q3UY51 Psd-208ENSMUST00000224556 2034 ntBASIC35.35■■■■□ 3.25
Lrrc55Q3UY51 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Lrrc55Q3UY51 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.88■■■■□ 3.17
Lrrc55Q3UY51 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Lrrc55Q3UY51 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Lrrc55Q3UY51 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.56■■■■□ 3.12
Lrrc55Q3UY51 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.48■■■■□ 3.11
Lrrc55Q3UY51 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Lrrc55Q3UY51 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Lrrc55Q3UY51 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.39■■■■□ 3.1
Lrrc55Q3UY51 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.29■■■■□ 3.08
Lrrc55Q3UY51 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Lrrc55Q3UY51 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Lrrc55Q3UY51 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Lrrc55Q3UY51 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Lrrc55Q3UY51 Gm25238-201ENSMUST00000174914 89 ntBASIC33.92■■■■□ 3.02
Lrrc55Q3UY51 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Lrrc55Q3UY51 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Lrrc55Q3UY51 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Lrrc55Q3UY51 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.86■■■■□ 3.01
Lrrc55Q3UY51 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
Lrrc55Q3UY51 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Lrrc55Q3UY51 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Lrrc55Q3UY51 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Lrrc55Q3UY51 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Lrrc55Q3UY51 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.48■■■□□ 2.95
Lrrc55Q3UY51 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
Lrrc55Q3UY51 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Lrrc55Q3UY51 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Lrrc55Q3UY51 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Lrrc55Q3UY51 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
Lrrc55Q3UY51 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.12■■■□□ 2.89
Lrrc55Q3UY51 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Lrrc55Q3UY51 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Lrrc55Q3UY51 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Lrrc55Q3UY51 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
Lrrc55Q3UY51 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
Lrrc55Q3UY51 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.85
Lrrc55Q3UY51 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.82■■■□□ 2.84
Lrrc55Q3UY51 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.73■■■□□ 2.83
Lrrc55Q3UY51 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Lrrc55Q3UY51 Gm25262-201ENSMUST00000174934 133 ntBASIC32.59■■■□□ 2.81
Lrrc55Q3UY51 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Lrrc55Q3UY51 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.49■■■□□ 2.79
Lrrc55Q3UY51 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.46■■■□□ 2.79
Lrrc55Q3UY51 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.45■■■□□ 2.79
Lrrc55Q3UY51 Gm27325-201ENSMUST00000175467 74 ntBASIC32.43■■■□□ 2.78
Lrrc55Q3UY51 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
Lrrc55Q3UY51 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Lrrc55Q3UY51 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.28■■■□□ 2.76
Lrrc55Q3UY51 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Lrrc55Q3UY51 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Lrrc55Q3UY51 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Lrrc55Q3UY51 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Lrrc55Q3UY51 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Lrrc55Q3UY51 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.09■■■□□ 2.73
Lrrc55Q3UY51 Rab21-202ENSMUST00000218831 843 ntBASIC32.03■■■□□ 2.72
Lrrc55Q3UY51 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
Lrrc55Q3UY51 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.01■■■□□ 2.71
Lrrc55Q3UY51 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.98■■■□□ 2.71
Lrrc55Q3UY51 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Lrrc55Q3UY51 Gm26115-201ENSMUST00000175605 87 ntBASIC31.91■■■□□ 2.7
Lrrc55Q3UY51 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Lrrc55Q3UY51 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Lrrc55Q3UY51 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Lrrc55Q3UY51 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.74■■■□□ 2.67
Lrrc55Q3UY51 Gm8109-201ENSMUST00000194076 746 ntBASIC31.73■■■□□ 2.67
Lrrc55Q3UY51 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
Lrrc55Q3UY51 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Lrrc55Q3UY51 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Lrrc55Q3UY51 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Lrrc55Q3UY51 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Lrrc55Q3UY51 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.68■■■□□ 2.66
Lrrc55Q3UY51 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Lrrc55Q3UY51 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.57■■■□□ 2.64
Lrrc55Q3UY51 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Lrrc55Q3UY51 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Lrrc55Q3UY51 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.54■■■□□ 2.64
Lrrc55Q3UY51 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.48■■■□□ 2.63
Lrrc55Q3UY51 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Lrrc55Q3UY51 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Lrrc55Q3UY51 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Lrrc55Q3UY51 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Lrrc55Q3UY51 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
Lrrc55Q3UY51 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.37■■■□□ 2.61
Lrrc55Q3UY51 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms