RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	RFA2	P26754	273 aa	Known RBP	5.45	□□□□□ -1.54
UBA3	YPR066W	PEP3	P27801	918 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	PIL1	P53252	339 aa	Known RBP	5.45	□□□□□ -1.54
UBA3	YPR066W	COQ6	P53318	479 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	TIM10	P87108	93 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	TDA9	Q04545	1251 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	ATG23	Q06671	453 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	ECM30	Q06673	1274 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	DSE3	Q08729	430 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	NUS1	Q12063	375 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	ERG27	Q12452	347 aa	Known RBP	5.45	□□□□□ -1.54
UBA3	YPR066W	ECM29	P38737	1868 aa		5.45	□□□□□ -1.54
UBA3	YPR066W	FOB1	O13329	566 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	CPA2	P03965	1118 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	SUI3	P09064	285 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	WHI2	P12611	486 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	RNR3	P21672	869 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	GDA1	P32621	518 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	MCR1	P36060	302 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	ALY1	P36117	915 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	UIP5	P36137	443 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	YBR225W	P38321	900 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	PFK26	P40433	827 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	NPA3	P47122	385 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	ARE2	P53629	642 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	INN1	P53901	409 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	SLD5	Q03406	294 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	HBT1	Q07653	1046 aa	Known RBP	5.44	□□□□□ -1.54
UBA3	YPR066W	CRT10	Q08226	957 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	PUS9	Q12069	462 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	ZPS1	Q12512	249 aa		5.44	□□□□□ -1.54
UBA3	YPR066W	COX1	P00401	534 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	TKL1	P23254	680 aa	Known RBP	5.43	□□□□□ -1.54
UBA3	YPR066W	SGF29	P25554	259 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	RGT1	P32862	1170 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	UBP11	P36026	717 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	ERC1	P38767	581 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	MTG2	P38860	518 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	VPS45	P38932	577 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	UBP7	P40453	1071 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	FMS1	P50264	508 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	YGL117W	P53133	265 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	RAD30	Q04049	632 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	LCB4	Q12246	624 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	YBR126W-A	Q8TGU7	68 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	YOR019W	Q99248	730 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	AI5_ALPHA	Q9ZZX1	630 aa		5.43	□□□□□ -1.54
UBA3	YPR066W	CET1	O13297	549 aa	Predicted RBP	5.42	□□□□□ -1.54
UBA3	YPR066W	HIP1	P06775	603 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	POX1	P13711	748 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	VPS1	P21576	704 aa	Known RBP	5.42	□□□□□ -1.54
UBA3	YPR066W	YCK1	P23291	538 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	YSP3	P25036	478 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	SAC6	P32599	642 aa	Known RBP	5.42	□□□□□ -1.54
UBA3	YPR066W	NFU1	P32860	256 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	REG2	P38232	338 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	SLZ1	P40167	298 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	LAS21	P40367	830 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	EPL1	P43572	832 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	SAD1	P43589	448 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	IRC6	P43615	237 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	AAD10	P47182	288 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	CPR8	P53728	308 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	MUB1	Q03162	620 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	MFB1	Q04922	465 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	YML053C	Q04978	212 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	YDR034W-B	Q6Q5X2	51 aa		5.42	□□□□□ -1.54
UBA3	YPR066W	SRB5	P32585	307 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	HES1	P35843	434 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	RPF2	P36160	344 aa	Known RBP	5.41	□□□□□ -1.54
UBA3	YPR066W	NOP4	P37838	685 aa	Known RBP	5.41	□□□□□ -1.54
UBA3	YPR066W	SDS3	P40505	327 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	PCI8	P40512	444 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	DJP1	P40564	432 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	IME4	P41833	600 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	MSY1	P48527	492 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	MRPL19	P53875	158 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	RAD33	Q04231	177 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	CIR2	Q08822	631 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	HUA2	Q12134	243 aa		5.41	□□□□□ -1.54
UBA3	YPR066W	TPK2	P06245	380 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	RRP43	P25359	394 aa	Predicted RBP	5.4	□□□□□ -1.54
UBA3	YPR066W	SIP1	P32578	815 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	TFC3	P34111	1160 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	PES4	P39684	611 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	SAP1	P39955	897 aa	Known RBP	5.4	□□□□□ -1.54
UBA3	YPR066W	RMD8	P43620	662 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	SGM1	P47166	707 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	ASN1	P49089	572 aa	Known RBP	5.4	□□□□□ -1.54
UBA3	YPR066W	LIF1	P53150	421 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	SLI1	P53304	468 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	YVH1	Q02256	364 aa	Known RBP	5.4	□□□□□ -1.54
UBA3	YPR066W	NGL3	Q03210	505 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	TAF11	Q04226	346 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	ERP4	Q12450	207 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	ARP6	Q12509	438 aa		5.4	□□□□□ -1.54
UBA3	YPR066W	SEC53	P07283	254 aa	Known RBP	5.39	□□□□□ -1.55
UBA3	YPR066W	KAR3	P17119	729 aa		5.39	□□□□□ -1.55
UBA3	YPR066W	KIN3	P22209	435 aa		5.39	□□□□□ -1.55
UBA3	YPR066W	MRPL9	P31334	269 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms