RNA–Protein interactions for RNA: YPR026W

ATH1, Transcript of Acid trehalase required for utilization of extracellular trehalose, yeast

Gene ATH1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATH1	YPR026W	PAT1	P25644	796 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	RPS7A	P26786	190 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	MAC1	P35192	417 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	VAB2	P40003	282 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	JLP2	P40206	208 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	FET4	P40988	552 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	ALR2	P43553	858 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	LPD1	P09624	499 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	SRV2	P17555	526 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	ATP12	P22135	325 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	PDC6	P26263	563 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	YHR045W	P38775	560 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	LYS9	P38999	446 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	YEL057C	P39983	233 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	SAD1	P43589	448 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	IRC7	P43623	340 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	ERP6	P53198	216 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	RPT4	P53549	437 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	VPS75	P53853	264 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	TEP1	P53916	434 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	YNL115C	P53925	644 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	MRS2	Q01926	470 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	ECM9	Q02202	377 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	ELP3	Q02908	557 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	NHX1	Q04121	633 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	CSI1	Q04368	295 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	MRPL1	Q04599	285 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	YLR225C	Q05948	407 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	SKG3	Q06315	1026 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	YPQ2	Q06328	317 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	YDR306C	Q06640	478 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	YOL019W	Q08157	551 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	VHS3	Q08438	674 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	RPN8	Q08723	338 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	GET3	Q12154	354 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	ARP6	Q12509	438 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	CHS2	P14180	963 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	RVS161	P25343	265 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	ALK1	P43633	760 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	MRX6	P48564	524 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	MPP6	P53725	186 aa	Predicted RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	YMR265C	Q03508	461 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	ARX1	Q03862	593 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	SNO4	Q04902	237 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	ARO10	Q06408	635 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	CDC73	Q06697	393 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	HSP33	Q08914	237 aa	Known RBP	4.91	□□□□□ -1.62
ATH1	YPR026W	HSP32	Q08992	237 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	ICL2	Q12031	575 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	HBN1	Q96VH4	193 aa		4.91	□□□□□ -1.62
ATH1	YPR026W	CAP1	P28495	268 aa	Known RBP	4.9	□□□□□ -1.62
ATH1	YPR026W	AAR2	P32357	355 aa	Predicted RBP	4.9	□□□□□ -1.62
ATH1	YPR026W	YKL070W	P36087	169 aa		4.9	□□□□□ -1.62
ATH1	YPR026W	TDP1	P38319	544 aa		4.9	□□□□□ -1.62
ATH1	YPR026W	PEX28	P38848	579 aa		4.9	□□□□□ -1.62
ATH1	YPR026W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
ATH1	YPR026W	PET117	Q02771	107 aa		4.9	□□□□□ -1.62
ATH1	YPR026W	STE20	Q03497	939 aa	Known RBP	4.9	□□□□□ -1.62
ATH1	YPR026W	DAL4	Q04895	635 aa		4.9	□□□□□ -1.62
ATH1	YPR026W	YLR297W	Q05899	129 aa		4.9	□□□□□ -1.62
ATH1	YPR026W	YML002W	P0CF17	737 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	SIS1	P25294	352 aa	Known RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	YCR016W	P25617	290 aa	Known RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	SPT10	P35208	640 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	TAT1	P38085	619 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	REV7	P38927	245 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	RRN7	P40992	514 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	YFL034W	P43564	1073 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	GNP1	P48813	663 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	RRN9	P53437	365 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	CNM67	P53865	581 aa	Known RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	CUS1	Q02554	436 aa	Predicted RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	HLR1	Q04429	423 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	RCO1	Q04779	684 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	GTO3	Q04806	366 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	DTD1	Q07648	150 aa	Known RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	STE12	P13574	688 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
ATH1	YPR026W	RNR1	P21524	888 aa	Known RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	RRT12	P25381	491 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	GCG1	P32656	232 aa	Known RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	CAF4	P36130	643 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	DAD2	P36162	133 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	SRL3	P36167	246 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	WSS1	P38838	269 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	PUG1	P40100	303 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	YKE4	P40544	346 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	HXT14	P42833	540 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	KAP120	Q02932	1032 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	THI7	Q05998	598 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	GAS5	Q08193	484 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	YTM1	Q12024	460 aa	Predicted RBP	4.9	□□□□□ -1.63
ATH1	YPR026W	UBX3	Q12229	455 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	NCB2	Q92317	146 aa		4.9	□□□□□ -1.63
ATH1	YPR026W	MTF2	P10849	440 aa		4.89	□□□□□ -1.63
ATH1	YPR026W	ZIP1	P31111	875 aa		4.89	□□□□□ -1.63
ATH1	YPR026W	PTK1	P36002	662 aa	Predicted RBP	4.89	□□□□□ -1.63
ATH1	YPR026W	SLI15	P38283	698 aa		4.89	□□□□□ -1.63
ATH1	YPR026W	OSH7	P38755	437 aa		4.89	□□□□□ -1.63
ATH1	YPR026W	ATM1	P40416	690 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms