RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	PWP1	P21304	576 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	GSH1	P32477	678 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	SOF1	P33750	489 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	LHS1	P36016	881 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	PXL1	P36166	706 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	AGP2	P38090	596 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	REG2	P38232	338 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	YMR124W	P39523	943 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	LSM5	P40089	93 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	ASG1	P40467	964 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	MET28	P40573	187 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	MEP2	P41948	499 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	RPN11	P43588	306 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	YGR250C	P53316	781 aa	Known RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	RPL15B	P54780	204 aa	Predicted RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	YML037C	Q03703	340 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	YOR389W	Q08912	624 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	LEA1	Q08963	238 aa	Predicted RBP	1.8	□□□□□ -2.12
RLM1	YPL089C	HER1	Q12276	1246 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	GRX6	Q12438	231 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	RTN2	Q12443	393 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	YJR112W-A	Q3E743	109 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	YPT6	Q99260	215 aa		1.8	□□□□□ -2.12
RLM1	YPL089C	HXK2	P04807	486 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	ARD1	P07347	238 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	PET111	P08468	800 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	AIM17	P23180	465 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	VMA16	P23968	213 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	YCP4	P25349	247 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	YIH1	P25637	258 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	VMA8	P32610	256 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	YKL050C	P35736	922 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	ADE17	P38009	592 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	MNN2	P38069	597 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	FLO5	P38894	1075 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	CCT6	P39079	546 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	ECM10	P39987	644 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	1.79	□□□□□ -2.12	not detected
RLM1	YPL089C	AXL1	P40851	1208 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	ROK1	P45818	564 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	DPB11	P47027	764 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	STR3	P53101	465 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	RSC1	P53236	928 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	YGR066C	P53242	292 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	YPR003C	P53394	754 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	IST1	P53843	298 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	BUD22	Q04347	519 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	LUC7	Q07508	261 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	GRC3	Q07845	632 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	BUD7	Q08754	746 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	ATX2	Q12067	313 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	GET3	Q12154	354 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	SNU66	Q12420	587 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	1.79	□□□□□ -2.12	not detected
RLM1	YPL089C	PDX1	P16451	410 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	EST1	P17214	699 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	RPC53	P25441	422 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	PXA2	P34230	853 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	DIA4	P38705	446 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	TOM71	P38825	639 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	SMF1	P38925	575 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	AFG3	P39925	761 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	MET18	P40469	1032 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	DOT5	P40553	215 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	YJL107C	P42947	387 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	YFR020W	P43600	232 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	CTK2	P46962	323 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	RPS7B	P48164	190 aa	Known RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	ORC5	P50874	479 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	JJJ1	P53863	590 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	VTC3	Q02725	835 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	RPC11	Q04307	110 aa	Predicted RBP	1.79	□□□□□ -2.12
RLM1	YPL089C	VPS38	Q05919	439 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	RIM20	Q12033	661 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	ATG9	Q12142	997 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	SMC6	Q12749	1114 aa		1.79	□□□□□ -2.12
RLM1	YPL089C	GAL80	P04387	435 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	KGD1	P20967	1014 aa	Known RBP	1.78	□□□□□ -2.12
RLM1	YPL089C	CNA1	P23287	553 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	ADH7	P25377	361 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	DBF4	P32325	704 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	SSE2	P32590	693 aa	Known RBP	1.78	□□□□□ -2.12
RLM1	YPL089C	PEX5	P35056	612 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	BLI1	P35727	113 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	UBP11	P36026	717 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	CST26	P38226	397 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	MUM2	P38236	366 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	VID24	P38263	362 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	ARN1	P38731	627 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	UIP3	P39547	235 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	CDC1	P40986	491 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	MAF1	P41910	395 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	EFM6	P53970	246 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	MAK10	Q02197	733 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	YDR131C	Q03899	556 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	ECM22	Q05958	814 aa	Predicted RBP	1.78	□□□□□ -2.12
RLM1	YPL089C	YOL159C	Q08300	171 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	PFA4	Q12006	378 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	INP53	Q12271	1107 aa		1.78	□□□□□ -2.12
RLM1	YPL089C	YOL159C-A	Q3E769	90 aa		1.78	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms