RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W AUR1P36107 401 aaPredicted RBP2.76□□□□□ -1.97
PEP12YOR036W MAL33P38157 468 aa2.76□□□□□ -1.97
PEP12YOR036W DIA4P38705 446 aaPredicted RBP2.76□□□□□ -1.97
PEP12YOR036W RGI2P40188 164 aa2.76□□□□□ -1.97
PEP12YOR036W ASG1P40467 964 aa2.76□□□□□ -1.97
PEP12YOR036W SPO22P40511 975 aa2.76□□□□□ -1.97
PEP12YOR036W LYS4P49367 693 aaPredicted RBP2.76□□□□□ -1.97
PEP12YOR036W STR3P53101 465 aaKnown RBP2.76□□□□□ -1.97
PEP12YOR036W RSM28Q03430 361 aa2.76□□□□□ -1.97
PEP12YOR036W SNU56Q03782 492 aaKnown RBP2.76□□□□□ -1.97
PEP12YOR036W YMR034CQ05131 434 aaPredicted RBP2.76□□□□□ -1.97
PEP12YOR036W UTP21Q06078 939 aaPredicted RBP2.76□□□□□ -1.97
PEP12YOR036W PSR1Q07800 427 aa2.76□□□□□ -1.97
PEP12YOR036W TCO89Q08921 799 aa2.76□□□□□ -1.97
PEP12YOR036W LEA1Q08963 238 aaPredicted RBP2.76□□□□□ -1.97
PEP12YOR036W SPE4Q12455 300 aa2.76□□□□□ -1.97
PEP12YOR036W CBS1P14066 229 aa2.75□□□□□ -1.97
PEP12YOR036W RED1P14291 827 aa2.75□□□□□ -1.97
PEP12YOR036W LCB1P25045 558 aaKnown RBP2.75□□□□□ -1.97
PEP12YOR036W YIH1P25637 258 aa2.75□□□□□ -1.97
PEP12YOR036W PTC6P25646 442 aa2.75□□□□□ -1.97
PEP12YOR036W GSH1P32477 678 aa2.75□□□□□ -1.97
PEP12YOR036W SOF1P33750 489 aaKnown RBP2.75□□□□□ -1.97
PEP12YOR036W AGP2P38090 596 aa2.75□□□□□ -1.97
PEP12YOR036W UIP3P39547 235 aa2.75□□□□□ -1.97
PEP12YOR036W ECM10P39987 644 aa2.75□□□□□ -1.97
PEP12YOR036W MRX1P40050 688 aa2.75□□□□□ -1.97
PEP12YOR036W PKP1P40530 394 aa2.75□□□□□ -1.97
PEP12YOR036W MET28P40573 187 aa2.75□□□□□ -1.97
PEP12YOR036W CIN1P40987 1014 aa2.75□□□□□ -1.97
PEP12YOR036W IST1P53843 298 aaPredicted RBP2.75□□□□□ -1.97
PEP12YOR036W YNL058CP53947 316 aa2.75□□□□□ -1.97
PEP12YOR036W YML037CQ03703 340 aa2.75□□□□□ -1.97
PEP12YOR036W SYF1Q04048 859 aaPredicted RBP2.75□□□□□ -1.97
PEP12YOR036W ARP9Q05123 467 aa2.75□□□□□ -1.97
PEP12YOR036W RTT103Q05543 409 aa2.75□□□□□ -1.97
PEP12YOR036W YEH1Q07804 573 aa2.75□□□□□ -1.97
PEP12YOR036W LYS21Q12122 440 aaKnown RBP2.75□□□□□ -1.97
PEP12YOR036W ATG9Q12142 997 aa2.75□□□□□ -1.97
PEP12YOR036W SFI1Q12369 946 aa2.75□□□□□ -1.97
PEP12YOR036W YJR112W-AQ3E743 109 aa2.75□□□□□ -1.97
PEP12YOR036W YMR230W-AQ3E7B5 62 aa2.75□□□□□ -1.97
PEP12YOR036W RTC1Q08281 1341 aa2.74□□□□□ -1.97
PEP12YOR036W MET17P06106 444 aa2.74□□□□□ -1.97
PEP12YOR036W ILV2P07342 687 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W ARD1P07347 238 aaPredicted RBP2.74□□□□□ -1.97
PEP12YOR036W DFR1P07807 211 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
PEP12YOR036W FUR1P18562 216 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W ADH7P25377 361 aa2.74□□□□□ -1.97
PEP12YOR036W POL4P25615 582 aa2.74□□□□□ -1.97
PEP12YOR036W LHS1P36016 881 aa2.74□□□□□ -1.97
PEP12YOR036W SNU114P36048 1008 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W FMP46P36141 133 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W ADE17P38009 592 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W FTH1P38310 465 aa2.74□□□□□ -1.97
PEP12YOR036W RTT107P38850 1070 aa2.74□□□□□ -1.97
PEP12YOR036W YEL057CP39983 233 aa2.74□□□□□ -1.97
PEP12YOR036W LSM5P40089 93 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W MET18P40469 1032 aa2.74□□□□□ -1.97
PEP12YOR036W CDC1P40986 491 aa2.74□□□□□ -1.97
PEP12YOR036W ROK1P45818 564 aaPredicted RBP2.74□□□□□ -1.97
PEP12YOR036W CTK2P46962 323 aa2.74□□□□□ -1.97
PEP12YOR036W YGR066CP53242 292 aa2.74□□□□□ -1.97
PEP12YOR036W JJJ1P53863 590 aa2.74□□□□□ -1.97
PEP12YOR036W RPT6Q01939 405 aaKnown RBP2.74□□□□□ -1.97
PEP12YOR036W YMR317WQ04893 1140 aa2.74□□□□□ -1.97
PEP12YOR036W MLH2Q07980 695 aa2.74□□□□□ -1.97
PEP12YOR036W GRX6Q12438 231 aa2.74□□□□□ -1.97
PEP12YOR036W YPT6Q99260 215 aa2.74□□□□□ -1.97
PEP12YOR036W HXK2P04807 486 aaKnown RBP2.73□□□□□ -1.97
PEP12YOR036W PET111P08468 800 aa2.73□□□□□ -1.97
PEP12YOR036W VMA16P23968 213 aa2.73□□□□□ -1.97
PEP12YOR036W PEP3P27801 918 aa2.73□□□□□ -1.97
PEP12YOR036W SRO77P38163 1010 aa2.73□□□□□ -1.97
PEP12YOR036W AXL1P40851 1208 aa2.73□□□□□ -1.97
PEP12YOR036W DPB11P47027 764 aaPredicted RBP2.73□□□□□ -1.97
PEP12YOR036W RPS7BP48164 190 aaKnown RBP2.73□□□□□ -1.97
PEP12YOR036W YGR250CP53316 781 aaKnown RBP2.73□□□□□ -1.97
PEP12YOR036W YPR003CP53394 754 aa2.73□□□□□ -1.97
PEP12YOR036W EFM6P53970 246 aa2.73□□□□□ -1.97
PEP12YOR036W ZDS2P54786 942 aa2.73□□□□□ -1.97
PEP12YOR036W ETT1Q08421 412 aaKnown RBP2.73□□□□□ -1.97
PEP12YOR036W RRG1Q12167 365 aaPredicted RBP2.73□□□□□ -1.97
PEP12YOR036W INP53Q12271 1107 aa2.73□□□□□ -1.97
PEP12YOR036W RTN2Q12443 393 aa2.73□□□□□ -1.97
PEP12YOR036W RPC53P25441 422 aa2.72□□□□□ -1.97
PEP12YOR036W YKL050CP35736 922 aa2.72□□□□□ -1.97
PEP12YOR036W MNN2P38069 597 aa2.72□□□□□ -1.97
PEP12YOR036W REG2P38232 338 aa2.72□□□□□ -1.97
PEP12YOR036W MET30P39014 640 aa2.72□□□□□ -1.97
PEP12YOR036W YFR020WP43600 232 aa2.72□□□□□ -1.97
PEP12YOR036W APT1P49435 187 aaKnown RBP2.72□□□□□ -1.97
PEP12YOR036W DIA3P52290 468 aa2.72□□□□□ -1.97
PEP12YOR036W VID30P53076 958 aa2.72□□□□□ -1.97
PEP12YOR036W HOS2P53096 452 aaPredicted RBP2.72□□□□□ -1.97
PEP12YOR036W LCL3P53153 274 aa2.72□□□□□ -1.97
PEP12YOR036W BUD22Q04347 519 aaKnown RBP2.72□□□□□ -1.97
PEP12YOR036W YLR455WQ06188 304 aa2.72□□□□□ -1.97
PEP12YOR036W THI3Q07471 609 aa2.72□□□□□ -1.97
PEP12YOR036W LUC7Q07508 261 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms