RNA–Protein interactions for RNA: YOL080C

REX4, Transcript of Putative RNA exonuclease, yeast

Gene REX4, Length 870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REX4	YOL080C	SMY1	P32364	656 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	ARC19	P33204	171 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	XRS2	P33301	854 aa		4.26	□□□□□ -1.73
REX4	YOL080C	SLC1	P33333	303 aa		4.26	□□□□□ -1.73
REX4	YOL080C	TFC3	P34111	1160 aa		4.26	□□□□□ -1.73
REX4	YOL080C	COY1	P34237	679 aa		4.26	□□□□□ -1.73
REX4	YOL080C	MNN2	P38069	597 aa		4.26	□□□□□ -1.73
REX4	YOL080C	MUM2	P38236	366 aa		4.26	□□□□□ -1.73
REX4	YOL080C	SEC31	P38968	1273 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	MET30	P39014	640 aa		4.26	□□□□□ -1.73
REX4	YOL080C	ERP2	P39704	215 aa		4.26	□□□□□ -1.73
REX4	YOL080C	ECM10	P39987	644 aa		4.26	□□□□□ -1.73
REX4	YOL080C	VRG4	P40107	337 aa		4.26	□□□□□ -1.73
REX4	YOL080C	UTP18	P40362	594 aa	Predicted RBP	4.26	□□□□□ -1.73
REX4	YOL080C	PFK26	P40433	827 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	RSM28	Q03430	361 aa		4.26	□□□□□ -1.73
REX4	YOL080C	HEL2	Q05580	639 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	TSR1	Q07381	788 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	TRM8	Q12009	286 aa		4.26	□□□□□ -1.73
REX4	YOL080C	APC2	Q12440	853 aa		4.26	□□□□□ -1.73
REX4	YOL080C	ERG27	Q12452	347 aa	Known RBP	4.26	□□□□□ -1.73
REX4	YOL080C	CEX1	Q12453	761 aa		4.26	□□□□□ -1.73
REX4	YOL080C	NKP1	Q12493	238 aa		4.26	□□□□□ -1.73
REX4	YOL080C	ECM5	Q03214	1411 aa		4.26	□□□□□ -1.73
REX4	YOL080C	EDE1	P34216	1381 aa		4.26	□□□□□ -1.73
REX4	YOL080C	SNF1	P06782	633 aa	Known RBP	4.25	□□□□□ -1.73
REX4	YOL080C	CBP1	P07252	654 aa		4.25	□□□□□ -1.73
REX4	YOL080C	ERG8	P24521	451 aa		4.25	□□□□□ -1.73
REX4	YOL080C	SSH4	P32343	579 aa		4.25	□□□□□ -1.73
REX4	YOL080C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
REX4	YOL080C	TEF4	P36008	412 aa	Known RBP	4.25	□□□□□ -1.73
REX4	YOL080C	MED8	P38304	223 aa		4.25	□□□□□ -1.73
REX4	YOL080C	YIL169C	P40442	995 aa		4.25	□□□□□ -1.73
REX4	YOL080C	YFR020W	P43600	232 aa		4.25	□□□□□ -1.73
REX4	YOL080C	CTK2	P46962	323 aa		4.25	□□□□□ -1.73
REX4	YOL080C	YNR061C	P53747	219 aa		4.25	□□□□□ -1.73
REX4	YOL080C	IST1	P53843	298 aa	Predicted RBP	4.25	□□□□□ -1.73
REX4	YOL080C	CWC21	Q03375	135 aa	Known RBP	4.25	□□□□□ -1.73
REX4	YOL080C	ARP9	Q05123	467 aa		4.25	□□□□□ -1.73
REX4	YOL080C	SSP2	Q08646	371 aa		4.25	□□□□□ -1.73
REX4	YOL080C	YOR019W	Q99248	730 aa		4.25	□□□□□ -1.73
REX4	YOL080C	VCX1	Q99385	411 aa		4.25	□□□□□ -1.73
REX4	YOL080C	ARD1	P07347	238 aa	Predicted RBP	4.24	□□□□□ -1.73
REX4	YOL080C	SSO1	P32867	290 aa		4.24	□□□□□ -1.73
REX4	YOL080C	MRPL40	P36534	297 aa		4.24	□□□□□ -1.73
REX4	YOL080C	LEU5	P38702	357 aa		4.24	□□□□□ -1.73
REX4	YOL080C	PCL6	P40038	420 aa		4.24	□□□□□ -1.73
REX4	YOL080C	STB2	P46679	850 aa		4.24	□□□□□ -1.73
REX4	YOL080C	YTP1	P53584	459 aa		4.24	□□□□□ -1.73
REX4	YOL080C	ESBP6	P53918	673 aa		4.24	□□□□□ -1.73
REX4	YOL080C	MRD1	Q06106	887 aa	Known RBP	4.24	□□□□□ -1.73
REX4	YOL080C	SSK22	P25390	1331 aa	Predicted RBP	4.23	□□□□□ -1.73
REX4	YOL080C	MMS1	Q06211	1407 aa		4.23	□□□□□ -1.73
REX4	YOL080C	RAP1	P11938	827 aa		4.23	□□□□□ -1.73
REX4	YOL080C	GUK1	P15454	187 aa	Known RBP	4.23	□□□□□ -1.73
REX4	YOL080C	RPB4	P20433	221 aa	Predicted RBP	4.23	□□□□□ -1.73
REX4	YOL080C	CDC10	P25342	322 aa	Known RBP	4.23	□□□□□ -1.73
REX4	YOL080C	POL4	P25615	582 aa		4.23	□□□□□ -1.73
REX4	YOL080C	CNS1	P33313	385 aa		4.23	□□□□□ -1.73
REX4	YOL080C	NIP100	P33420	868 aa		4.23	□□□□□ -1.73
REX4	YOL080C	SHC1	P39000	512 aa		4.23	□□□□□ -1.73
REX4	YOL080C	CAJ1	P39101	391 aa		4.23	□□□□□ -1.73
REX4	YOL080C	VID27	P40157	782 aa		4.23	□□□□□ -1.73
REX4	YOL080C	SGF73	P53165	657 aa		4.23	□□□□□ -1.73
REX4	YOL080C	SPO19	Q03029	223 aa		4.23	□□□□□ -1.73
REX4	YOL080C	YMR018W	Q04364	514 aa		4.23	□□□□□ -1.73
REX4	YOL080C	ECI1	Q05871	280 aa		4.23	□□□□□ -1.73
REX4	YOL080C	VID22	Q05934	901 aa		4.23	□□□□□ -1.73
REX4	YOL080C	UTP21	Q06078	939 aa	Predicted RBP	4.23	□□□□□ -1.73
REX4	YOL080C	GPN2	Q08726	347 aa	Predicted RBP	4.23	□□□□□ -1.73
REX4	YOL080C	ERP4	Q12450	207 aa		4.23	□□□□□ -1.73
REX4	YOL080C	RTP1	Q12751	981 aa		4.23	□□□□□ -1.73
REX4	YOL080C	SWI1	P09547	1314 aa		4.22	□□□□□ -1.73
REX4	YOL080C	IKI3	Q06706	1349 aa	Known RBP	4.22	□□□□□ -1.73
REX4	YOL080C	YLR302C	O13544	120 aa		4.22	□□□□□ -1.73
REX4	YOL080C	PET123	P17558	318 aa		4.22	□□□□□ -1.73
REX4	YOL080C	FAR1	P21268	830 aa		4.22	□□□□□ -1.73
REX4	YOL080C	BUD14	P27637	709 aa		4.22	□□□□□ -1.73
REX4	YOL080C	PUP2	P32379	260 aa		4.22	□□□□□ -1.73
REX4	YOL080C	GCS1	P35197	352 aa		4.22	□□□□□ -1.73
REX4	YOL080C	MIC60	P36112	540 aa		4.22	□□□□□ -1.73
REX4	YOL080C	KAP123	P40069	1113 aa	Known RBP	4.22	□□□□□ -1.73
REX4	YOL080C	MET18	P40469	1032 aa		4.22	□□□□□ -1.73
REX4	YOL080C	RRP9	Q06506	573 aa	Known RBP	4.22	□□□□□ -1.73
REX4	YOL080C	MCP2	Q06567	569 aa		4.22	□□□□□ -1.73
REX4	YOL080C	YDL121C	Q07541	149 aa		4.22	□□□□□ -1.73
REX4	YOL080C	YOL159C	Q08300	171 aa		4.22	□□□□□ -1.73
REX4	YOL080C	MRPS28	P21771	286 aa		4.21	□□□□□ -1.74
REX4	YOL080C	SAC1	P32368	623 aa	Known RBP	4.21	□□□□□ -1.74
REX4	YOL080C	RRP1	P35178	278 aa	Predicted RBP	4.21	□□□□□ -1.74
REX4	YOL080C	MPE1	P35728	441 aa	Known RBP	4.21	□□□□□ -1.74
REX4	YOL080C	ESL2	P36168	1195 aa		4.21	□□□□□ -1.74
REX4	YOL080C	RFC1	P38630	861 aa	Known RBP	4.21	□□□□□ -1.74
REX4	YOL080C	AXL2	P38928	823 aa		4.21	□□□□□ -1.74
REX4	YOL080C	RIC1	P40395	1056 aa		4.21	□□□□□ -1.74
REX4	YOL080C	HXT9	P40885	567 aa		4.21	□□□□□ -1.74
REX4	YOL080C	EFM5	P53200	248 aa	Known RBP	4.21	□□□□□ -1.74
REX4	YOL080C	YNL234W	P53857	426 aa		4.21	□□□□□ -1.74
REX4	YOL080C	BET4	Q00618	327 aa		4.21	□□□□□ -1.74
REX4	YOL080C	TAP42	Q04372	366 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms