RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A LEA1Q08963 238 aaPredicted RBP3.81□□□□□ -1.8
YSF3YNL138W-A PCD1Q12524 340 aa3.81□□□□□ -1.8
YSF3YNL138W-A UTP20P35194 2493 aaKnown RBP3.8□□□□□ -1.8
YSF3YNL138W-A YML003WP0CF16 290 aa3.8□□□□□ -1.8
YSF3YNL138W-A IFA38P38286 347 aa3.8□□□□□ -1.8
YSF3YNL138W-A AZR1P50080 613 aa3.8□□□□□ -1.8
YSF3YNL138W-A YPR003CP53394 754 aa3.8□□□□□ -1.8
YSF3YNL138W-A STP1Q00947 519 aa3.8□□□□□ -1.8
YSF3YNL138W-A MRPL13Q02204 264 aa3.8□□□□□ -1.8
YSF3YNL138W-A PNG1Q02890 363 aa3.8□□□□□ -1.8
YSF3YNL138W-A SLD5Q03406 294 aa3.8□□□□□ -1.8
YSF3YNL138W-A ATG16Q03818 150 aa3.8□□□□□ -1.8
YSF3YNL138W-A INM2Q05533 292 aa3.8□□□□□ -1.8
YSF3YNL138W-A VAM6Q07468 1049 aa3.8□□□□□ -1.8
YSF3YNL138W-A AFT2Q08957 416 aa3.8□□□□□ -1.8
YSF3YNL138W-A COX17Q12287 69 aa3.8□□□□□ -1.8
YSF3YNL138W-A TRA1P38811 3744 aa3.79□□□□□ -1.8
YSF3YNL138W-A PRP8P33334 2413 aaKnown RBP3.79□□□□□ -1.8
YSF3YNL138W-A PTH2P34222 208 aa3.79□□□□□ -1.8
YSF3YNL138W-A EXO84P38261 753 aa3.79□□□□□ -1.8
YSF3YNL138W-A MSY1P48527 492 aa3.79□□□□□ -1.8
YSF3YNL138W-A YMR321CQ04898 105 aa3.79□□□□□ -1.8
YSF3YNL138W-A PFA4Q12006 378 aa3.79□□□□□ -1.8
YSF3YNL138W-A CRC1Q12289 327 aa3.79□□□□□ -1.8
YSF3YNL138W-A SNU66Q12420 587 aaPredicted RBP3.79□□□□□ -1.8
YSF3YNL138W-A RIF1P29539 1916 aa3.78□□□□□ -1.8
YSF3YNL138W-A YLR422WQ06409 1932 aa3.78□□□□□ -1.8
YSF3YNL138W-A ATP2P00830 511 aaKnown RBP3.78□□□□□ -1.8
YSF3YNL138W-A GAL4P04386 881 aa3.78□□□□□ -1.8
YSF3YNL138W-A ILS1P09436 1072 aaKnown RBP3.78□□□□□ -1.8
YSF3YNL138W-A MTF2P10849 440 aa3.78□□□□□ -1.8
YSF3YNL138W-A YAP1P19880 650 aaKnown RBP3.78□□□□□ -1.8
YSF3YNL138W-A UBC1P21734 215 aaKnown RBP3.78□□□□□ -1.8
YSF3YNL138W-A ECM32P32644 1121 aaKnown RBP3.78□□□□□ -1.8
YSF3YNL138W-A MRS6P32864 603 aaKnown RBP3.78□□□□□ -1.8
YSF3YNL138W-A SHP1P34223 423 aa3.78□□□□□ -1.8
YSF3YNL138W-A YKL097CP34245 136 aa3.78□□□□□ -1.8
YSF3YNL138W-A GEX2P36173 615 aa3.78□□□□□ -1.8
YSF3YNL138W-A MRPL36P36531 177 aa3.78□□□□□ -1.8
YSF3YNL138W-A FUI1P38196 639 aa3.78□□□□□ -1.8
YSF3YNL138W-A NPR3P38742 1146 aa3.78□□□□□ -1.8
YSF3YNL138W-A SAP185P40856 1058 aa3.78□□□□□ -1.8
YSF3YNL138W-A SMK1P41808 388 aa3.78□□□□□ -1.8
YSF3YNL138W-A SAM1P10659 382 aaKnown RBP3.77□□□□□ -1.81
YSF3YNL138W-A YSP3P25036 478 aa3.77□□□□□ -1.81
YSF3YNL138W-A PUP3P25451 205 aaKnown RBP3.77□□□□□ -1.81
YSF3YNL138W-A LRE1P25579 583 aaKnown RBP3.77□□□□□ -1.81
YSF3YNL138W-A COQ3P27680 312 aa3.77□□□□□ -1.81
YSF3YNL138W-A VPS24P36095 224 aaKnown RBP3.77□□□□□ -1.81
YSF3YNL138W-A DBP7P36120 742 aaKnown RBP3.77□□□□□ -1.81
YSF3YNL138W-A FLO5P38894 1075 aa3.77□□□□□ -1.81
YSF3YNL138W-A YIL024CP40543 189 aa3.77□□□□□ -1.81
YSF3YNL138W-A DJP1P40564 432 aa3.77□□□□□ -1.81
YSF3YNL138W-A COG1P53079 417 aa3.77□□□□□ -1.81
YSF3YNL138W-A COP1P53622 1201 aaKnown RBP3.77□□□□□ -1.81
YSF3YNL138W-A TFC6Q06339 672 aa3.77□□□□□ -1.81
YSF3YNL138W-A SWT1Q12104 458 aa3.77□□□□□ -1.81
YSF3YNL138W-A ERP3Q12403 225 aa3.77□□□□□ -1.81
YSF3YNL138W-A TPK1P06244 397 aa3.76□□□□□ -1.81
YSF3YNL138W-A MAS2P11914 482 aa3.76□□□□□ -1.81
YSF3YNL138W-A MRP7P12687 371 aa3.76□□□□□ -1.81
YSF3YNL138W-A PCT1P13259 424 aa3.76□□□□□ -1.81
YSF3YNL138W-A PWP2P25635 923 aaKnown RBP3.76□□□□□ -1.81
YSF3YNL138W-A MCM4P30665 933 aaKnown RBP3.76□□□□□ -1.81
YSF3YNL138W-A NUP120P35729 1037 aa3.76□□□□□ -1.81
YSF3YNL138W-A YIL161WP40449 235 aaKnown RBP3.76□□□□□ -1.81
YSF3YNL138W-A CDC1P40986 491 aa3.76□□□□□ -1.81
YSF3YNL138W-A BNA1P47096 177 aa3.76□□□□□ -1.81
YSF3YNL138W-A ORC5P50874 479 aa3.76□□□□□ -1.81
YSF3YNL138W-A YRB30P53107 440 aaPredicted RBP3.76□□□□□ -1.81
YSF3YNL138W-A CSL4P53859 292 aaPredicted RBP3.76□□□□□ -1.81
YSF3YNL138W-A GTR1Q00582 310 aa3.76□□□□□ -1.81
YSF3YNL138W-A PDS5Q04264 1277 aa3.76□□□□□ -1.81
YSF3YNL138W-A VMS1Q04311 632 aaKnown RBP3.76□□□□□ -1.81
YSF3YNL138W-A HCR1Q05775 265 aaKnown RBP3.76□□□□□ -1.81
YSF3YNL138W-A PIG1Q06216 648 aa3.76□□□□□ -1.81
YSF3YNL138W-A ATG23Q06671 453 aa3.76□□□□□ -1.81
YSF3YNL138W-A CSR1Q06705 408 aaKnown RBP3.76□□□□□ -1.81
YSF3YNL138W-A KEL3Q08979 651 aaPredicted RBP3.76□□□□□ -1.81
YSF3YNL138W-A BAG7Q12128 409 aa3.76□□□□□ -1.81
YSF3YNL138W-A TY2A-LR1P0C2J4 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-FP0CX61 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-GR2P0CX62 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A SNA3P14359 133 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-CP25383 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A PDR3P33200 976 aa3.75□□□□□ -1.81
YSF3YNL138W-A CTF18P49956 741 aa3.75□□□□□ -1.81
YSF3YNL138W-A GLO1P50107 326 aa3.75□□□□□ -1.81
YSF3YNL138W-A YGR021WP53212 290 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-DR2Q03483 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TMA16Q08687 178 aa3.75□□□□□ -1.81
YSF3YNL138W-A GET3Q12154 354 aaKnown RBP3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-BQ12260 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-OR2Q12293 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-DR1Q12392 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-OR1Q12439 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A TY2A-DR3Q99303 438 aa3.75□□□□□ -1.81
YSF3YNL138W-A SUI3P09064 285 aaKnown RBP3.74□□□□□ -1.81
YSF3YNL138W-A SPO16P17122 198 aa3.74□□□□□ -1.81
YSF3YNL138W-A PRE8P23639 250 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms