RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C ERG10P41338 398 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C VMA13P41807 478 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C YRB1P41920 201 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C GYP8P43570 497 aa9.09□□□□□ -0.95
SEC61YLR378C GLG2P47011 380 aa9.09□□□□□ -0.95
SEC61YLR378C NUP84P52891 726 aa9.09□□□□□ -0.95
SEC61YLR378C COG2P53271 262 aa9.09□□□□□ -0.95
SEC61YLR378C VAC7P53950 1165 aa9.09□□□□□ -0.95
SEC61YLR378C YNL035CP53962 389 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C REX2P54964 269 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C GOT1Q03554 138 aa9.09□□□□□ -0.95
SEC61YLR378C HEL2Q05580 639 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C CIA1Q05583 330 aa9.09□□□□□ -0.95
SEC61YLR378C BUD7Q08754 746 aa9.09□□□□□ -0.95
SEC61YLR378C MCD1Q12158 566 aa9.09□□□□□ -0.95
SEC61YLR378C GTT2Q12390 233 aa9.09□□□□□ -0.95
SEC61YLR378C AHA1Q12449 350 aaKnown RBP9.09□□□□□ -0.95
SEC61YLR378C HSH49Q99181 213 aaPredicted RBP9.09□□□□□ -0.95
SEC61YLR378C UBR1P19812 1950 aa9.09□□□□□ -0.95
SEC61YLR378C TAO3P40468 2376 aa9.08□□□□□ -0.96
SEC61YLR378C UBA1P22515 1024 aaKnown RBP9.08□□□□□ -0.96
SEC61YLR378C SPS19P32573 292 aaKnown RBP9.08□□□□□ -0.96
SEC61YLR378C YKL100CP34248 587 aa9.08□□□□□ -0.96
SEC61YLR378C PHO11P35842 467 aa9.08□□□□□ -0.96
SEC61YLR378C PHO12P38693 467 aa9.08□□□□□ -0.96
SEC61YLR378C YHR045WP38775 560 aa9.08□□□□□ -0.96
SEC61YLR378C MED6P38782 295 aa9.08□□□□□ -0.96
SEC61YLR378C RPL34BP40525 121 aaKnown RBP9.08□□□□□ -0.96
SEC61YLR378C VEL1P53058 206 aa9.08□□□□□ -0.96
SEC61YLR378C ACL4Q03771 387 aa9.08□□□□□ -0.96
SEC61YLR378C ESA1Q08649 445 aa9.08□□□□□ -0.96
SEC61YLR378C YOR012WQ12351 137 aa9.08□□□□□ -0.96
SEC61YLR378C PDC5P16467 563 aaKnown RBP9.07□□□□□ -0.96
SEC61YLR378C VPS34P22543 875 aa9.07□□□□□ -0.96
SEC61YLR378C GFD2P25370 566 aaKnown RBP9.07□□□□□ -0.96
SEC61YLR378C BRF1P29056 596 aa9.07□□□□□ -0.96
SEC61YLR378C SFP1P32432 683 aa9.07□□□□□ -0.96
SEC61YLR378C NEM1P38757 446 aa9.07□□□□□ -0.96
SEC61YLR378C SHY1P53266 389 aa9.07□□□□□ -0.96
SEC61YLR378C NPL3Q01560 414 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
SEC61YLR378C YML131WQ03102 365 aa9.07□□□□□ -0.96
SEC61YLR378C CCE1Q03702 353 aa9.07□□□□□ -0.96
SEC61YLR378C PML39Q03760 334 aa9.07□□□□□ -0.96
SEC61YLR378C YET2Q04210 160 aa9.07□□□□□ -0.96
SEC61YLR378C HFD1Q04458 532 aa9.07□□□□□ -0.96
SEC61YLR378C SGO1Q08490 590 aa9.07□□□□□ -0.96
SEC61YLR378C TRP3P00937 484 aa9.06□□□□□ -0.96
SEC61YLR378C RSR1P13856 272 aa9.06□□□□□ -0.96
SEC61YLR378C SGF29P25554 259 aa9.06□□□□□ -0.96
SEC61YLR378C BUB2P26448 306 aaPredicted RBP9.06□□□□□ -0.96
SEC61YLR378C SIN4P32259 974 aa9.06□□□□□ -0.96
SEC61YLR378C SWE1P32944 819 aa9.06□□□□□ -0.96
SEC61YLR378C THI80P35202 319 aa9.06□□□□□ -0.96
SEC61YLR378C MPT5P39016 859 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
SEC61YLR378C DHH1P39517 506 aaKnown RBP9.06□□□□□ -0.96
SEC61YLR378C YER034WP40022 185 aaKnown RBP9.06□□□□□ -0.96
SEC61YLR378C YEN1P40028 759 aa9.06□□□□□ -0.96
SEC61YLR378C YIR007WP40566 764 aa9.06□□□□□ -0.96
SEC61YLR378C EMC4P53073 190 aa9.06□□□□□ -0.96
SEC61YLR378C ERP6P53198 216 aa9.06□□□□□ -0.96
SEC61YLR378C DMA2P53924 522 aa9.06□□□□□ -0.96
SEC61YLR378C YDR476CQ03362 224 aa9.06□□□□□ -0.96
SEC61YLR378C SSL1Q04673 461 aaPredicted RBP9.06□□□□□ -0.96
SEC61YLR378C VAM6Q07468 1049 aa9.06□□□□□ -0.96
SEC61YLR378C IRC10Q08118 586 aa9.06□□□□□ -0.96
SEC61YLR378C SNX3Q08826 162 aaKnown RBP9.06□□□□□ -0.96
SEC61YLR378C TY4A-HQ6Q5P6 413 aa9.06□□□□□ -0.96
SEC61YLR378C PHO87P25360 923 aa9.05□□□□□ -0.96
SEC61YLR378C SPS22P25380 463 aa9.05□□□□□ -0.96
SEC61YLR378C YJU3P28321 313 aa9.05□□□□□ -0.96
SEC61YLR378C COX13P32799 129 aa9.05□□□□□ -0.96
SEC61YLR378C STE5P32917 917 aa9.05□□□□□ -0.96
SEC61YLR378C TIP20P33891 701 aa9.05□□□□□ -0.96
SEC61YLR378C IRS4P36115 615 aaKnown RBP9.05□□□□□ -0.96
SEC61YLR378C JEM1P40358 645 aa9.05□□□□□ -0.96
SEC61YLR378C YJR154WP47181 346 aa9.05□□□□□ -0.96
SEC61YLR378C SWC4P53201 476 aa9.05□□□□□ -0.96
SEC61YLR378C ARC35P53731 342 aaKnown RBP9.05□□□□□ -0.96
SEC61YLR378C SFB2P53953 876 aa9.05□□□□□ -0.96
SEC61YLR378C GAS3Q03655 524 aa9.05□□□□□ -0.96
SEC61YLR378C YHM2Q04013 314 aa9.05□□□□□ -0.96
SEC61YLR378C GLO2Q05584 274 aa9.05□□□□□ -0.96
SEC61YLR378C FAR10Q06001 478 aa9.05□□□□□ -0.96
SEC61YLR378C RIF2Q06208 395 aa9.05□□□□□ -0.96
SEC61YLR378C UPC2Q12151 913 aa9.05□□□□□ -0.96
SEC61YLR378C COS2P0CX12 379 aa9.05□□□□□ -0.96
SEC61YLR378C COS3P0CX13 379 aa9.05□□□□□ -0.96
SEC61YLR378C DBR1P24309 405 aaKnown RBP9.05□□□□□ -0.96
SEC61YLR378C ZIP1P31111 875 aa9.05□□□□□ -0.96
SEC61YLR378C PTC1P35182 281 aa9.05□□□□□ -0.96
SEC61YLR378C PCL5P38794 229 aa9.05□□□□□ -0.96
SEC61YLR378C ARB1P40024 610 aaKnown RBP9.05□□□□□ -0.96
SEC61YLR378C IAH1P41734 238 aa9.05□□□□□ -0.96
SEC61YLR378C COS4P43542 379 aa9.05□□□□□ -0.96
SEC61YLR378C SET2P46995 733 aaKnown RBP9.05□□□□□ -0.96
SEC61YLR378C FRE4P53746 719 aa9.05□□□□□ -0.96
SEC61YLR378C PEX13P80667 386 aa9.05□□□□□ -0.96
SEC61YLR378C CDA1Q06702 301 aa9.05□□□□□ -0.96
SEC61YLR378C YEH2Q07950 538 aa9.05□□□□□ -0.96
SEC61YLR378C SGT1Q08446 395 aa9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms