RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C NMD5P46970 1048 aa3.44□□□□□ -1.86
SDO1YLR022C YJL043WP47053 257 aa3.44□□□□□ -1.86
SDO1YLR022C ASE1P50275 885 aa3.44□□□□□ -1.86
SDO1YLR022C CNM67P53865 581 aaKnown RBP3.44□□□□□ -1.86
SDO1YLR022C COQ9Q05779 260 aa3.44□□□□□ -1.86
SDO1YLR022C DSE3Q08729 430 aa3.44□□□□□ -1.86
SDO1YLR022C MEC1P38111 2368 aa3.43□□□□□ -1.86
SDO1YLR022C MTF1P14908 341 aaKnown RBP3.43□□□□□ -1.86
SDO1YLR022C FPR1P20081 114 aaKnown RBP3.43□□□□□ -1.86
SDO1YLR022C PCA1P38360 1216 aa3.43□□□□□ -1.86
SDO1YLR022C TIF5P38431 405 aaKnown RBP3.43□□□□□ -1.86
SDO1YLR022C BTT1P40314 149 aaPredicted RBP3.43□□□□□ -1.86
SDO1YLR022C VTC2P43585 828 aa3.43□□□□□ -1.86
SDO1YLR022C BPL1P48445 690 aaPredicted RBP3.43□□□□□ -1.86
SDO1YLR022C MNT2P53059 558 aa3.43□□□□□ -1.86
SDO1YLR022C NRM1P53718 249 aa3.43□□□□□ -1.86
SDO1YLR022C ALG11P53954 548 aaKnown RBP3.43□□□□□ -1.86
SDO1YLR022C SUR7P54003 302 aa3.43□□□□□ -1.86
SDO1YLR022C MTD1Q02046 320 aaKnown RBP3.43□□□□□ -1.86
SDO1YLR022C WAR1Q03631 944 aa3.43□□□□□ -1.86
SDO1YLR022C SPN1Q06505 410 aaPredicted RBP3.43□□□□□ -1.86
SDO1YLR022C BSP1Q06604 576 aa3.43□□□□□ -1.86
SDO1YLR022C YPQ1Q12010 308 aa3.43□□□□□ -1.86
SDO1YLR022C RDL1Q12305 139 aaKnown RBP3.43□□□□□ -1.86
SDO1YLR022C BRR2P32639 2163 aaKnown RBP3.42□□□□□ -1.86
SDO1YLR022C IPP1P00817 287 aaKnown RBP3.42□□□□□ -1.86
SDO1YLR022C COX4P04037 155 aa3.42□□□□□ -1.86
SDO1YLR022C SEC12P11655 471 aa3.42□□□□□ -1.86
SDO1YLR022C MRC1P25588 1096 aa3.42□□□□□ -1.86
SDO1YLR022C DPB3P27344 201 aa3.42□□□□□ -1.86
SDO1YLR022C YJU2P28320 278 aaPredicted RBP3.42□□□□□ -1.86
SDO1YLR022C SKG6P32900 734 aaPredicted RBP3.42□□□□□ -1.86
SDO1YLR022C ERV46P39727 415 aa3.42□□□□□ -1.86
SDO1YLR022C YER186CP40101 306 aa3.42□□□□□ -1.86
SDO1YLR022C YJR061WP40355 935 aa3.42□□□□□ -1.86
SDO1YLR022C GPD2P41911 440 aaKnown RBP3.42□□□□□ -1.86
SDO1YLR022C VPS25P47142 202 aa3.42□□□□□ -1.86
SDO1YLR022C CWC21Q03375 135 aaKnown RBP3.42□□□□□ -1.86
SDO1YLR022C YOR378WQ08902 515 aa3.42□□□□□ -1.86
SDO1YLR022C YLR111WQ12528 110 aa3.42□□□□□ -1.86
SDO1YLR022C GAL4P04386 881 aa3.41□□□□□ -1.86
SDO1YLR022C COX11P19516 300 aaKnown RBP3.41□□□□□ -1.86
SDO1YLR022C CBP3P21560 335 aa3.41□□□□□ -1.86
SDO1YLR022C OPI1P21957 404 aa3.41□□□□□ -1.86
SDO1YLR022C BRF1P29056 596 aa3.41□□□□□ -1.86
SDO1YLR022C RAD16P31244 790 aa3.41□□□□□ -1.86
SDO1YLR022C MRPL9P31334 269 aa3.41□□□□□ -1.86
SDO1YLR022C CDC5P32562 705 aa3.41□□□□□ -1.86
SDO1YLR022C MIA40P36046 403 aa3.41□□□□□ -1.86
SDO1YLR022C MRX3P38172 270 aa3.41□□□□□ -1.86
SDO1YLR022C OSW5P40219 148 aa3.41□□□□□ -1.86
SDO1YLR022C SNO3P43544 222 aa3.41□□□□□ -1.86
SDO1YLR022C MNP1P53163 194 aaPredicted RBP3.41□□□□□ -1.86
SDO1YLR022C YNL092WP53934 400 aa3.41□□□□□ -1.86
SDO1YLR022C RSC9Q03124 581 aa3.41□□□□□ -1.86
SDO1YLR022C HER2Q03557 464 aa3.41□□□□□ -1.86
SDO1YLR022C VMS1Q04311 632 aaKnown RBP3.41□□□□□ -1.86
SDO1YLR022C CRT10Q08226 957 aa3.41□□□□□ -1.86
SDO1YLR022C TRE2Q08693 809 aa3.41□□□□□ -1.86
SDO1YLR022C GAL80P04387 435 aa3.4□□□□□ -1.87
SDO1YLR022C RAD3P06839 778 aa3.4□□□□□ -1.87
SDO1YLR022C MSF1P08425 469 aa3.4□□□□□ -1.87
SDO1YLR022C DAL82P21705 255 aa3.4□□□□□ -1.87
SDO1YLR022C ARG1P22768 420 aa3.4□□□□□ -1.87
SDO1YLR022C HEM12P32347 362 aaPredicted RBP3.4□□□□□ -1.87
SDO1YLR022C DPH2P32461 534 aa3.4□□□□□ -1.87
SDO1YLR022C YBR071WP38243 211 aa3.4□□□□□ -1.87
SDO1YLR022C VID24P38263 362 aa3.4□□□□□ -1.87
SDO1YLR022C SDH8P38345 138 aa3.4□□□□□ -1.87
SDO1YLR022C WSC4P38739 605 aa3.4□□□□□ -1.87
SDO1YLR022C EMP65P40085 556 aa3.4□□□□□ -1.87
SDO1YLR022C ASG1P40467 964 aa3.4□□□□□ -1.87
SDO1YLR022C SAE2P46946 345 aa3.4□□□□□ -1.87
SDO1YLR022C FYV8P46949 817 aaKnown RBP3.4□□□□□ -1.87
SDO1YLR022C SPC105P53148 917 aa3.4□□□□□ -1.87
SDO1YLR022C MPS1P54199 764 aa3.4□□□□□ -1.87
SDO1YLR022C ERG13P54839 491 aaKnown RBP3.4□□□□□ -1.87
SDO1YLR022C CWC2Q12046 339 aaPredicted RBP3.4□□□□□ -1.87
SDO1YLR022C HRT3Q12347 344 aa3.4□□□□□ -1.87
SDO1YLR022C ILV1P00927 576 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C RPL1AP0CX43 217 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C RPL1BP0CX44 217 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C KAR1P11927 433 aa3.39□□□□□ -1.87
SDO1YLR022C YPK1P12688 680 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C CLN3P13365 580 aa3.39□□□□□ -1.87
SDO1YLR022C SUI2P20459 304 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C VPS3P23643 1011 aa3.39□□□□□ -1.87
SDO1YLR022C YCL042WP25572 119 aa3.39□□□□□ -1.87
SDO1YLR022C RML2P32611 393 aa3.39□□□□□ -1.87
SDO1YLR022C SSP120P39931 234 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C YEN1P40028 759 aa3.39□□□□□ -1.87
SDO1YLR022C TIF34P40217 347 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C FIS1P40515 155 aa3.39□□□□□ -1.87
SDO1YLR022C MAD2P40958 196 aa3.39□□□□□ -1.87
SDO1YLR022C ERG10P41338 398 aaKnown RBP3.39□□□□□ -1.87
SDO1YLR022C NUP84P52891 726 aa3.39□□□□□ -1.87
SDO1YLR022C SLD3P53135 668 aa3.39□□□□□ -1.87
SDO1YLR022C YPL068CQ02749 293 aa3.39□□□□□ -1.87
SDO1YLR022C HRD3Q05787 833 aa3.39□□□□□ -1.87
SDO1YLR022C TFC6Q06339 672 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms