RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeast

Gene LDB18, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB18	YLL049W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
LDB18	YLL049W	PRP2	P20095	876 aa	Predicted RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	DCC1	P25559	380 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	HEM12	P32347	362 aa	Predicted RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
LDB18	YLL049W	NIP100	P33420	868 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	YET1	P35723	206 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	FMP46	P36141	133 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	MRPL15	P36523	253 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	AHP1	P38013	176 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	ECM2	P38241	364 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	PCL5	P38794	229 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	SPF1	P39986	1215 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	PIC2	P40035	300 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	TES1	P41903	349 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	GAT1	P43574	510 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	ROK1	P45818	564 aa	Predicted RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	RFX1	P48743	811 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	MON1	P53129	644 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	YGR127W	P53275	312 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	VPS9	P54787	451 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	ROT1	Q03691	256 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	ARX1	Q03862	593 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	VMS1	Q04311	632 aa	Known RBP	5.19	□□□□□ -1.58
LDB18	YLL049W	ERV41	Q04651	352 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	TPO1	Q07824	586 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	RAX1	Q08760	435 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	SEY1	Q99287	776 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	YLR149C	Q99296	730 aa		5.19	□□□□□ -1.58
LDB18	YLL049W	MDM35	O60200	86 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	HOM3	P10869	527 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	CLN1	P20437	546 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	MSP1	P28737	362 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	NTR2	P36118	322 aa	Predicted RBP	5.18	□□□□□ -1.58
LDB18	YLL049W	ADE17	P38009	592 aa	Known RBP	5.18	□□□□□ -1.58
LDB18	YLL049W	MOH1	P38191	138 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	GPI16	P38875	610 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	RVS167	P39743	482 aa	Known RBP	5.18	□□□□□ -1.58
LDB18	YLL049W	YAT2	P40017	923 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	PHB1	P40961	287 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	AAD14	P42884	376 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	RPC17	P47076	161 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	YGR111W	P53265	400 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	ECM9	Q02202	377 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	MDM30	Q05930	598 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	EMG1	Q06287	252 aa	Known RBP	5.18	□□□□□ -1.58
LDB18	YLL049W	YDL218W	Q07629	317 aa		5.18	□□□□□ -1.58
LDB18	YLL049W	YPT1	P01123	206 aa	Known RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	GCR1	P07261	785 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	YCR015C	P25616	317 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	NIP1	P32497	812 aa	Known RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	MIP6	P38760	659 aa	Known RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	YHR182W	P38870	785 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	YJL107C	P42947	387 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	TIM54	P47045	478 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	HSV2	P50079	448 aa	Predicted RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	SAP4	P53036	818 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	HST1	P53685	503 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	FDC1	Q03034	503 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	CTK1	Q03957	528 aa	Known RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	GAD1	Q04792	585 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	YPR078C	Q06813	372 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	BUD7	Q08754	746 aa		5.17	□□□□□ -1.58
LDB18	YLL049W	TMA46	Q12000	345 aa	Known RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	YRA1	Q12159	226 aa	Known RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	HSH49	Q99181	213 aa	Predicted RBP	5.17	□□□□□ -1.58
LDB18	YLL049W	FUR1	P18562	216 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	MSH1	P25846	959 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	MRPL9	P31334	269 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	YKL069W	P36088	180 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	TRM7	P38238	310 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	DHH1	P39517	506 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	MMM1	P41800	426 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	TRM9	P49957	279 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	ZRG17	P53735	605 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	ESF2	P53743	316 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	YNL247W	P53852	767 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	CDC14	Q00684	551 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	CCE1	Q03702	353 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	YET2	Q04210	160 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	GSF2	Q04697	403 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	GFD1	Q04839	188 aa	Known RBP	5.16	□□□□□ -1.58
LDB18	YLL049W	ARP9	Q05123	467 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	YOL107W	Q12239	342 aa		5.16	□□□□□ -1.58
LDB18	YLL049W	COX1	P00401	534 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	SFL1	P20134	766 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	GRR1	P24814	1151 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	TSR4	P25040	408 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	MKK1	P32490	508 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	GND1	P38720	489 aa	Known RBP	5.15	□□□□□ -1.59
LDB18	YLL049W	OTU2	P38747	307 aa	Known RBP	5.15	□□□□□ -1.59
LDB18	YLL049W	GIC1	P38785	314 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	MNN1	P39106	762 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	KHA1	P40309	873 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	CCT5	P40413	562 aa	Known RBP	5.15	□□□□□ -1.59
LDB18	YLL049W	YIL165C	P40446	119 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	IRR1	P40541	1150 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	SKP1	P52286	194 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	TYW3	P53177	273 aa		5.15	□□□□□ -1.59
LDB18	YLL049W	RCO1	Q04779	684 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms