RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	FAR3	P46671	204 aa		2.26	□□□□□ -2.05
NUP120	YKL057C	IMA1	P53051	589 aa		2.26	□□□□□ -2.05
NUP120	YKL057C	VPS38	Q05919	439 aa		2.26	□□□□□ -2.05
NUP120	YKL057C	YER145C-A	A0A023PYF4	145 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	MTF2	P10849	440 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	BIK1	P11709	440 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	NOP4	P37838	685 aa	Known RBP	2.25	□□□□□ -2.05
NUP120	YKL057C	YRB30	P53107	440 aa	Predicted RBP	2.25	□□□□□ -2.05
NUP120	YKL057C	CRZ1	P53968	678 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	YLR287C	Q05881	355 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	YLR112W	Q12130	139 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	YMR085W	P0CF18	432 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	EXO70	P19658	623 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	PAH1	P32567	862 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	HES1	P35843	434 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	NTC20	P38302	140 aa	Predicted RBP	2.25	□□□□□ -2.05
NUP120	YKL057C	GPD2	P41911	440 aa	Known RBP	2.25	□□□□□ -2.05
NUP120	YKL057C	WWM1	P43582	211 aa	Known RBP	2.25	□□□□□ -2.05
NUP120	YKL057C	VTC2	P43585	828 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	YNL181W	P53878	407 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	DIG1	Q03063	452 aa	Known RBP	2.25	□□□□□ -2.05
NUP120	YKL057C	ERO1	Q03103	563 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	RCO1	Q04779	684 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	ECI1	Q05871	280 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	OSW1	Q08692	278 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	SFI1	Q12369	946 aa		2.25	□□□□□ -2.05
NUP120	YKL057C	PMA2	P19657	947 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	YCK1	P23291	538 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	OCA4	P25366	362 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	PDR3	P33200	976 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	MIC60	P36112	540 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	DPH1	P40487	425 aa	Known RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	ARC1	P46672	376 aa	Known RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	DSL1	P53847	754 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	YAR066W	P0CX18	203 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	YHR214W	P0CX19	203 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	SGF29	P25554	259 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	AFG1	P32317	509 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	MRP20	P32387	263 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	SLZ1	P40167	298 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	PCI8	P40512	444 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	IMD4	P50094	524 aa	Known RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	SCW4	P53334	386 aa	Known RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	GTB1	Q04924	702 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	SAC1	P32368	623 aa	Known RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	OCA1	P50946	238 aa	Predicted RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	PDS5	Q04264	1277 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	VAM6	Q07468	1049 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	RIX7	Q07844	837 aa	Known RBP	2.24	□□□□□ -2.05
NUP120	YKL057C	RGT2	Q12300	763 aa		2.24	□□□□□ -2.05
NUP120	YKL057C	NAM2	P11325	894 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	PPH22	P23595	377 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	MGM1	P32266	881 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	ECM10	P39987	644 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	PKP1	P40530	394 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	STR3	P53101	465 aa	Known RBP	2.23	□□□□□ -2.05
NUP120	YKL057C	COP1	P53622	1201 aa	Known RBP	2.23	□□□□□ -2.05
NUP120	YKL057C	YSA1	Q01976	231 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	MUB1	Q03162	620 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
NUP120	YKL057C	SNF3	P10870	884 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	YKL023W	P36103	277 aa	Known RBP	2.23	□□□□□ -2.05
NUP120	YKL057C	IVY1	Q04934	453 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	YLR352W	Q06479	807 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	FMP45	Q07651	309 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
NUP120	YKL057C	TRM8	Q12009	286 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	AVL9	Q12500	764 aa		2.23	□□□□□ -2.05
NUP120	YKL057C	TKL1	P23254	680 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	SRO77	P38163	1010 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	LTP1	P40347	161 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	HRD3	Q05787	833 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	GSH2	Q08220	491 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	THP1	Q08231	455 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	VPS54	Q12071	889 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	RPL42A	P0CX27	106 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	RPL42B	P0CX28	106 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	KRS1	P15180	591 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	ARA1	P38115	344 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	YBP1	P38315	674 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	YMR178W	Q03219	274 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	CTL1	Q03220	320 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	EIS1	Q05050	843 aa	Known RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	YMR034C	Q05131	434 aa	Predicted RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	UBX3	Q12229	455 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	ARG3	P05150	338 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	ARD1	P07347	238 aa	Predicted RBP	2.22	□□□□□ -2.05
NUP120	YKL057C	LAG1	P38703	411 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	BZZ1	P38822	633 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	EXO1	P39875	702 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	YPR003C	P53394	754 aa		2.22	□□□□□ -2.05
NUP120	YKL057C	MSS1	P32559	526 aa	Predicted RBP	2.21	□□□□□ -2.06
NUP120	YKL057C	PTR2	P32901	601 aa		2.21	□□□□□ -2.06
NUP120	YKL057C	OCT1	P35999	772 aa		2.21	□□□□□ -2.06
NUP120	YKL057C	PXL1	P36166	706 aa		2.21	□□□□□ -2.06
NUP120	YKL057C	DIA4	P38705	446 aa	Predicted RBP	2.21	□□□□□ -2.06
NUP120	YKL057C	ARN1	P38731	627 aa		2.21	□□□□□ -2.06
NUP120	YKL057C	CTK2	P46962	323 aa		2.21	□□□□□ -2.06
NUP120	YKL057C	YGL138C	P53122	345 aa		2.21	□□□□□ -2.06
NUP120	YKL057C	PIB2	P53191	635 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms