RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W YNL035CP53962 389 aaKnown RBP6.97□□□□□ -1.29
PDA1YER178W GOT1Q03554 138 aa6.97□□□□□ -1.29
PDA1YER178W CTK1Q03957 528 aaKnown RBP6.97□□□□□ -1.29
PDA1YER178W CSN9Q03981 162 aa6.97□□□□□ -1.29
PDA1YER178W YDR109CQ04585 715 aa6.97□□□□□ -1.29
PDA1YER178W RCO1Q04779 684 aa6.97□□□□□ -1.29
PDA1YER178W YOR223WQ12015 292 aa6.97□□□□□ -1.29
PDA1YER178W APC9Q12107 265 aa6.97□□□□□ -1.29
PDA1YER178W PST1Q12355 444 aa6.97□□□□□ -1.29
PDA1YER178W RKM5Q12367 367 aa6.97□□□□□ -1.29
PDA1YER178W YPL247CQ12523 523 aa6.97□□□□□ -1.29
PDA1YER178W GCY1P14065 312 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
PDA1YER178W RNQ1P25367 405 aa6.96□□□□□ -1.3
PDA1YER178W SPR1P32603 445 aa6.96□□□□□ -1.3
PDA1YER178W YSC84P32793 468 aa6.96□□□□□ -1.3
PDA1YER178W PTM1P32857 523 aa6.96□□□□□ -1.3
PDA1YER178W NFU1P32860 256 aa6.96□□□□□ -1.3
PDA1YER178W SET3P36124 751 aa6.96□□□□□ -1.3
PDA1YER178W YBR032WP38223 100 aa6.96□□□□□ -1.3
PDA1YER178W YHR020WP38708 688 aaKnown RBP6.96□□□□□ -1.3
PDA1YER178W YPT35P38815 214 aaKnown RBP6.96□□□□□ -1.3
PDA1YER178W PET130P47065 347 aa6.96□□□□□ -1.3
PDA1YER178W HXT16P47185 567 aa6.96□□□□□ -1.3
PDA1YER178W LSC1P53598 329 aaKnown RBP6.96□□□□□ -1.3
PDA1YER178W HXT15P54854 567 aa6.96□□□□□ -1.3
PDA1YER178W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
PDA1YER178W SSL1Q04673 461 aaPredicted RBP6.96□□□□□ -1.3
PDA1YER178W STE23Q06010 1027 aa6.96□□□□□ -1.3
PDA1YER178W RSC3Q06639 885 aa6.96□□□□□ -1.3
PDA1YER178W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
PDA1YER178W YLR053CQ12026 108 aa6.96□□□□□ -1.3
PDA1YER178W TGL5Q12043 749 aa6.96□□□□□ -1.3
PDA1YER178W WSC3Q12215 556 aa6.96□□□□□ -1.3
PDA1YER178W CPA1P07258 411 aaKnown RBP6.95□□□□□ -1.3
PDA1YER178W YMR085WP0CF18 432 aa6.95□□□□□ -1.3
PDA1YER178W RPL1AP0CX43 217 aaKnown RBP6.95□□□□□ -1.3
PDA1YER178W RPL1BP0CX44 217 aaKnown RBP6.95□□□□□ -1.3
PDA1YER178W PRP16P15938 1071 aaPredicted RBP6.95□□□□□ -1.3
PDA1YER178W PPH21P23594 369 aa6.95□□□□□ -1.3
PDA1YER178W PHO84P25297 587 aaKnown RBP6.95□□□□□ -1.3
PDA1YER178W MF(ALPHA)2P32435 120 aa6.95□□□□□ -1.3
PDA1YER178W ATP11P32453 318 aa6.95□□□□□ -1.3
PDA1YER178W TIP20P33891 701 aa6.95□□□□□ -1.3
PDA1YER178W OAF3P36023 863 aa6.95□□□□□ -1.3
PDA1YER178W STB6P36085 766 aa6.95□□□□□ -1.3
PDA1YER178W UBP14P38237 781 aaKnown RBP6.95□□□□□ -1.3
PDA1YER178W HSE1P38753 452 aa6.95□□□□□ -1.3
PDA1YER178W HAT2P39984 401 aa6.95□□□□□ -1.3
PDA1YER178W BOL2P53082 120 aa6.95□□□□□ -1.3
PDA1YER178W TAF12Q03761 539 aa6.95□□□□□ -1.3
PDA1YER178W YML096WQ04489 525 aa6.95□□□□□ -1.3
PDA1YER178W BLS1Q06071 122 aa6.95□□□□□ -1.3
PDA1YER178W PLB3Q08108 686 aa6.95□□□□□ -1.3
PDA1YER178W TFB4Q12004 338 aa6.95□□□□□ -1.3
PDA1YER178W CHS5Q12114 671 aaKnown RBP6.95□□□□□ -1.3
PDA1YER178W KCS1Q12494 1050 aa6.95□□□□□ -1.3
PDA1YER178W IRA1P18963 3092 aa6.95□□□□□ -1.3
PDA1YER178W CDC21P06785 304 aa6.94□□□□□ -1.3
PDA1YER178W SWI5P08153 709 aa6.94□□□□□ -1.3
PDA1YER178W YAR066WP0CX18 203 aa6.94□□□□□ -1.3
PDA1YER178W YHR214WP0CX19 203 aa6.94□□□□□ -1.3
PDA1YER178W SBP1P10080 294 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W TRX2P22803 104 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W MRPL25P23369 157 aa6.94□□□□□ -1.3
PDA1YER178W RIM1P32445 135 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W RRP14P36080 434 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W MAK5P38112 773 aaPredicted RBP6.94□□□□□ -1.3
PDA1YER178W PHO89P38361 574 aa6.94□□□□□ -1.3
PDA1YER178W DED81P38707 554 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W EFM1P38732 585 aa6.94□□□□□ -1.3
PDA1YER178W YHR182WP38870 785 aa6.94□□□□□ -1.3
PDA1YER178W STN1P38960 494 aa6.94□□□□□ -1.3
PDA1YER178W SSN3P39073 555 aa6.94□□□□□ -1.3
PDA1YER178W SSP120P39931 234 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W UTP18P40362 594 aaPredicted RBP6.94□□□□□ -1.3
PDA1YER178W DSN1P40568 576 aa6.94□□□□□ -1.3
PDA1YER178W ARH1P48360 493 aa6.94□□□□□ -1.3
PDA1YER178W AIF1P52923 378 aa6.94□□□□□ -1.3
PDA1YER178W OPT2Q06593 877 aa6.94□□□□□ -1.3
PDA1YER178W RTK1Q12100 620 aaPredicted RBP6.94□□□□□ -1.3
PDA1YER178W RGS2Q99188 309 aa6.94□□□□□ -1.3
PDA1YER178W HRP1Q99383 534 aaKnown RBP6.94□□□□□ -1.3
PDA1YER178W ABF1P14164 731 aa6.93□□□□□ -1.3
PDA1YER178W SCL1P21243 252 aaKnown RBP6.93□□□□□ -1.3
PDA1YER178W AMD2P22580 549 aa6.93□□□□□ -1.3
PDA1YER178W NUP120P35729 1037 aa6.93□□□□□ -1.3
PDA1YER178W ASK1P35734 292 aa6.93□□□□□ -1.3
PDA1YER178W CCT6P39079 546 aa6.93□□□□□ -1.3
PDA1YER178W YJL206CP39529 758 aa6.93□□□□□ -1.3
PDA1YER178W PFA3P42836 336 aa6.93□□□□□ -1.3
PDA1YER178W ZIM17P42844 174 aa6.93□□□□□ -1.3
PDA1YER178W BIR1P47134 954 aa6.93□□□□□ -1.3
PDA1YER178W PAN2P53010 1115 aaPredicted RBP6.93□□□□□ -1.3
PDA1YER178W UBX4P54730 416 aa6.93□□□□□ -1.3
PDA1YER178W YMR155WQ03795 547 aa6.93□□□□□ -1.3
PDA1YER178W SPO20Q04359 397 aa6.93□□□□□ -1.3
PDA1YER178W YLR177WQ06251 628 aa6.93□□□□□ -1.3
PDA1YER178W STB3Q12427 513 aa6.93□□□□□ -1.3
PDA1YER178W POL30P15873 258 aaKnown RBP6.92□□□□□ -1.3
PDA1YER178W SRV2P17555 526 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms