RNA–Protein interactions for RNA: YER172C

BRR2, Transcript of RNA-dependent ATPase RNA helicase (DEIH box), yeastyeast

Gene BRR2, Length 6,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR2YER172C MLS1P30952 554 aa1.6□□□□□ -2.15
BRR2YER172C AEP1P32493 518 aa1.6□□□□□ -2.15
BRR2YER172C YBL055CP34220 418 aaPredicted RBP1.6□□□□□ -2.15
BRR2YER172C ALG3P38179 458 aa1.6□□□□□ -2.15
BRR2YER172C YBR259WP38338 688 aa1.6□□□□□ -2.15
BRR2YER172C YER158CP40095 573 aa1.6□□□□□ -2.15
BRR2YER172C SMX2P40204 77 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C ATM1P40416 690 aa1.6□□□□□ -2.15
BRR2YER172C IES1P43579 692 aa1.6□□□□□ -2.15
BRR2YER172C ALK1P43633 760 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C UTP6Q02354 440 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C VPS16Q03308 798 aa1.6□□□□□ -2.15
BRR2YER172C ARG7Q04728 441 aa1.6□□□□□ -2.15
BRR2YER172C VAC14Q06708 880 aa1.6□□□□□ -2.15
BRR2YER172C NSE1Q07913 336 aa1.6□□□□□ -2.15
BRR2YER172C YOR059CQ08448 450 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C MCD1Q12158 566 aa1.6□□□□□ -2.15
BRR2YER172C YOR012WQ12351 137 aa1.6□□□□□ -2.15
BRR2YER172C DBP10Q12389 995 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C RTN2Q12443 393 aa1.6□□□□□ -2.15
BRR2YER172C NOP14Q99207 810 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C CLN1P20437 546 aa1.6□□□□□ -2.15
BRR2YER172C PRR1P28708 518 aa1.6□□□□□ -2.15
BRR2YER172C MKS1P34072 584 aa1.6□□□□□ -2.15
BRR2YER172C PPS1P38148 807 aa1.6□□□□□ -2.15
BRR2YER172C IFA38P38286 347 aa1.6□□□□□ -2.15
BRR2YER172C MPT5P39016 859 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
BRR2YER172C RGI2P40188 164 aa1.6□□□□□ -2.15
BRR2YER172C BTT1P40314 149 aaPredicted RBP1.6□□□□□ -2.15
BRR2YER172C RRT5P43607 289 aa1.6□□□□□ -2.15
BRR2YER172C RIM21P48565 533 aa1.6□□□□□ -2.15
BRR2YER172C UTP8P53276 713 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C PDR16P53860 351 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C YPL113CQ02961 396 aa1.6□□□□□ -2.15
BRR2YER172C PIR1Q03178 341 aa1.6□□□□□ -2.15
BRR2YER172C DBP9Q06218 594 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C OPT2Q06593 877 aa1.6□□□□□ -2.15
BRR2YER172C AAD4Q07747 329 aa1.6□□□□□ -2.15
BRR2YER172C IRC23Q08416 157 aa1.6□□□□□ -2.15
BRR2YER172C YLR046CQ12253 270 aa1.6□□□□□ -2.15
BRR2YER172C ZPS1Q12512 249 aa1.6□□□□□ -2.15
BRR2YER172C HIS1P00498 297 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C ADH7P25377 361 aa1.6□□□□□ -2.15
BRR2YER172C PSO2P30620 661 aa1.6□□□□□ -2.15
BRR2YER172C PLC1P32383 869 aa1.6□□□□□ -2.15
BRR2YER172C GCD6P32501 712 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C SEC61P32915 480 aa1.6□□□□□ -2.15
BRR2YER172C PXA2P34230 853 aa1.6□□□□□ -2.15
BRR2YER172C RRN3P36070 627 aa1.6□□□□□ -2.15
BRR2YER172C YBR241CP38142 488 aa1.6□□□□□ -2.15
BRR2YER172C YHR020WP38708 688 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C UME6P39001 836 aa1.6□□□□□ -2.15
BRR2YER172C GIP4P39732 760 aa1.6□□□□□ -2.15
BRR2YER172C VMA13P41807 478 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C IMA1P53051 589 aa1.6□□□□□ -2.15
BRR2YER172C RSC4Q02206 625 aa1.6□□□□□ -2.15
BRR2YER172C ARP9Q05123 467 aa1.6□□□□□ -2.15
BRR2YER172C AAD15Q08361 143 aa1.6□□□□□ -2.15
BRR2YER172C AFT2Q08957 416 aa1.6□□□□□ -2.15
BRR2YER172C VPS68Q12016 184 aa1.6□□□□□ -2.15
BRR2YER172C LSO1Q3E827 93 aa1.6□□□□□ -2.15
BRR2YER172C COX3P00420 269 aa1.6□□□□□ -2.15
BRR2YER172C ADE4P04046 510 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C RPB4P20433 221 aaPredicted RBP1.6□□□□□ -2.15
BRR2YER172C DBP3P20447 523 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C SLY1P22213 666 aa1.6□□□□□ -2.15
BRR2YER172C EMC1P25574 760 aa1.6□□□□□ -2.15
BRR2YER172C SLD2P34252 453 aa1.6□□□□□ -2.15
BRR2YER172C NDE1P40215 560 aa1.6□□□□□ -2.15
BRR2YER172C YIL152WP40455 235 aa1.6□□□□□ -2.15
BRR2YER172C NDC80P40460 691 aa1.6□□□□□ -2.15
BRR2YER172C ARC1P46672 376 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C HOP2P53187 214 aa1.6□□□□□ -2.15
BRR2YER172C HER2Q03557 464 aa1.6□□□□□ -2.15
BRR2YER172C CRN1Q06440 651 aa1.6□□□□□ -2.15
BRR2YER172C PIN2Q12057 282 aa1.6□□□□□ -2.15
BRR2YER172C BEM2P39960 2167 aaKnown RBP1.6□□□□□ -2.15
BRR2YER172C SPS1P08458 490 aa1.59□□□□□ -2.15
BRR2YER172C YMR085WP0CF18 432 aa1.59□□□□□ -2.15
BRR2YER172C SPB1P25582 841 aaPredicted RBP1.59□□□□□ -2.15
BRR2YER172C GEX1P25596 615 aa1.59□□□□□ -2.15
BRR2YER172C HEM12P32347 362 aaPredicted RBP1.59□□□□□ -2.15
BRR2YER172C GCD11P32481 527 aaKnown RBP1.59□□□□□ -2.15
BRR2YER172C GDH2P33327 1092 aaKnown RBP1.59□□□□□ -2.15
BRR2YER172C RPS1AP33442 255 aaKnown RBP1.59□□□□□ -2.15
BRR2YER172C RPC37P36121 282 aa1.59□□□□□ -2.15
BRR2YER172C GEX2P36173 615 aa1.59□□□□□ -2.15
BRR2YER172C TSL1P38427 1098 aaKnown RBP1.59□□□□□ -2.15
BRR2YER172C NUP60P39705 539 aa1.59□□□□□ -2.15
BRR2YER172C TOS3P43637 560 aa1.59□□□□□ -2.15
BRR2YER172C STE24P47154 453 aa1.59□□□□□ -2.15
BRR2YER172C COG7P53195 279 aa1.59□□□□□ -2.15
BRR2YER172C SHR3Q02774 210 aa1.59□□□□□ -2.15
BRR2YER172C HPT1Q04178 221 aaKnown RBP1.59□□□□□ -2.15
BRR2YER172C HLR1Q04429 423 aa1.59□□□□□ -2.15
BRR2YER172C SEC13Q04491 297 aaKnown RBP1.59□□□□□ -2.15
BRR2YER172C UFO1Q04511 668 aa1.59□□□□□ -2.15
BRR2YER172C YOR387CQ08910 206 aa1.59□□□□□ -2.15
BRR2YER172C NUS1Q12063 375 aa1.59□□□□□ -2.15
BRR2YER172C NDJ1Q12366 352 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms