RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C IDH2P28241 369 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C FAA1P30624 700 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C YBL055CP34220 418 aaPredicted RBP6.59□□□□□ -1.35
SHO1YER118C ETP1P38748 585 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C MNN9P39107 395 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C YMR124WP39523 943 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C CEM1P39525 442 aa6.59□□□□□ -1.35
SHO1YER118C YJL193WP39542 402 aa6.59□□□□□ -1.35
SHO1YER118C ALD5P40047 520 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C ELO3P40319 345 aa6.59□□□□□ -1.35
SHO1YER118C ASG1P40467 964 aa6.59□□□□□ -1.35
SHO1YER118C INA22P40576 216 aa6.59□□□□□ -1.35
SHO1YER118C INP2Q03824 705 aa6.59□□□□□ -1.35
SHO1YER118C TY1A-MR1Q04215 440 aa6.59□□□□□ -1.35
SHO1YER118C ATG23Q06671 453 aa6.59□□□□□ -1.35
SHO1YER118C WHI4Q07655 649 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C GPN2Q08726 347 aaPredicted RBP6.59□□□□□ -1.35
SHO1YER118C FRE3Q08905 711 aa6.59□□□□□ -1.35
SHO1YER118C RLM1Q12224 676 aa6.59□□□□□ -1.35
SHO1YER118C TY1A-NL1Q12391 440 aaKnown RBP6.59□□□□□ -1.35
SHO1YER118C MRPL23Q12487 163 aaPredicted RBP6.59□□□□□ -1.35
SHO1YER118C PDA1P16387 420 aaKnown RBP6.58□□□□□ -1.36
SHO1YER118C PRE10P21242 288 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
SHO1YER118C VPS34P22543 875 aa6.58□□□□□ -1.36
SHO1YER118C PRD1P25375 712 aa6.58□□□□□ -1.36
SHO1YER118C SPS22P25380 463 aa6.58□□□□□ -1.36
SHO1YER118C STE14P32584 239 aa6.58□□□□□ -1.36
SHO1YER118C DSS4P32601 143 aa6.58□□□□□ -1.36
SHO1YER118C RPT5P33297 434 aaKnown RBP6.58□□□□□ -1.36
SHO1YER118C GLG1P36143 616 aa6.58□□□□□ -1.36
SHO1YER118C PIM1P36775 1133 aa6.58□□□□□ -1.36
SHO1YER118C MMS4P38257 691 aa6.58□□□□□ -1.36
SHO1YER118C NTC20P38302 140 aaPredicted RBP6.58□□□□□ -1.36
SHO1YER118C RFC3P38629 340 aa6.58□□□□□ -1.36
SHO1YER118C LIN1P38852 340 aaPredicted RBP6.58□□□□□ -1.36
SHO1YER118C SSO2P39926 295 aa6.58□□□□□ -1.36
SHO1YER118C AIM10P39965 576 aaKnown RBP6.58□□□□□ -1.36
SHO1YER118C YFR018CP43599 363 aa6.58□□□□□ -1.36
SHO1YER118C YJL132WP47014 750 aa6.58□□□□□ -1.36
SHO1YER118C YGR149WP48236 432 aa6.58□□□□□ -1.36
SHO1YER118C IMD4P50094 524 aaKnown RBP6.58□□□□□ -1.36
SHO1YER118C SCW11P53189 542 aa6.58□□□□□ -1.36
SHO1YER118C ACL4Q03771 387 aa6.58□□□□□ -1.36
SHO1YER118C FIN1Q03898 291 aa6.58□□□□□ -1.36
SHO1YER118C YDR444WQ04093 687 aa6.58□□□□□ -1.36
SHO1YER118C ARR3Q06598 404 aa6.58□□□□□ -1.36
SHO1YER118C YFH1Q07540 174 aa6.58□□□□□ -1.36
SHO1YER118C HRP1Q99383 534 aaKnown RBP6.58□□□□□ -1.36
SHO1YER118C TUB3P09734 445 aaKnown RBP6.57□□□□□ -1.36
SHO1YER118C VMA16P23968 213 aa6.57□□□□□ -1.36
SHO1YER118C NDI1P32340 513 aa6.57□□□□□ -1.36
SHO1YER118C DOA4P32571 926 aa6.57□□□□□ -1.36
SHO1YER118C SSE2P32590 693 aaKnown RBP6.57□□□□□ -1.36
SHO1YER118C AIM26P32858 118 aa6.57□□□□□ -1.36
SHO1YER118C RPC37P36121 282 aa6.57□□□□□ -1.36
SHO1YER118C PFF1P38244 976 aa6.57□□□□□ -1.36
SHO1YER118C GET2P40056 285 aa6.57□□□□□ -1.36
SHO1YER118C ALG5P40350 334 aa6.57□□□□□ -1.36
SHO1YER118C ULP2P40537 1034 aaPredicted RBP6.57□□□□□ -1.36
SHO1YER118C GCN20P43535 752 aaKnown RBP6.57□□□□□ -1.36
SHO1YER118C ECM27P47144 725 aa6.57□□□□□ -1.36
SHO1YER118C RMD9P53140 646 aaKnown RBP6.57□□□□□ -1.36
SHO1YER118C RRP46P53256 223 aaPredicted RBP6.57□□□□□ -1.36
SHO1YER118C SKO1Q02100 647 aa6.57□□□□□ -1.36
SHO1YER118C RSM24Q03976 319 aa6.57□□□□□ -1.36
SHO1YER118C ULA1Q12059 462 aa6.57□□□□□ -1.36
SHO1YER118C PRS5Q12265 496 aaKnown RBP6.57□□□□□ -1.36
SHO1YER118C MF(ALPHA)1P01149 165 aa6.56□□□□□ -1.36
SHO1YER118C CBP1P07252 654 aa6.56□□□□□ -1.36
SHO1YER118C PRP6P19735 899 aaPredicted RBP6.56□□□□□ -1.36
SHO1YER118C PRP2P20095 876 aaPredicted RBP6.56□□□□□ -1.36
SHO1YER118C VPS3P23643 1011 aa6.56□□□□□ -1.36
SHO1YER118C YCR015CP25616 317 aa6.56□□□□□ -1.36
SHO1YER118C TUL1P36096 758 aa6.56□□□□□ -1.36
SHO1YER118C TOS1P38288 455 aa6.56□□□□□ -1.36
SHO1YER118C MSS4P38994 779 aa6.56□□□□□ -1.36
SHO1YER118C IRC8P47046 822 aa6.56□□□□□ -1.36
SHO1YER118C RPT4P53549 437 aaKnown RBP6.56□□□□□ -1.36
SHO1YER118C GIM3P53900 129 aa6.56□□□□□ -1.36
SHO1YER118C YNL050CP53952 270 aa6.56□□□□□ -1.36
SHO1YER118C RSM28Q03430 361 aa6.56□□□□□ -1.36
SHO1YER118C RRB1Q04225 511 aaKnown RBP6.56□□□□□ -1.36
SHO1YER118C SEG1Q04279 960 aa6.56□□□□□ -1.36
SHO1YER118C SMD2Q06217 110 aaKnown RBP6.56□□□□□ -1.36
SHO1YER118C CUR1Q06469 252 aa6.56□□□□□ -1.36
SHO1YER118C MDM36Q06820 579 aa6.56□□□□□ -1.36
SHO1YER118C DIA2Q08496 732 aaPredicted RBP6.56□□□□□ -1.36
SHO1YER118C AEP3Q12089 606 aa6.56□□□□□ -1.36
SHO1YER118C VPS63O13549 108 aa6.55□□□□□ -1.36
SHO1YER118C AI1P03875 834 aa6.55□□□□□ -1.36
SHO1YER118C UNG1P12887 359 aa6.55□□□□□ -1.36
SHO1YER118C MCM4P30665 933 aaKnown RBP6.55□□□□□ -1.36
SHO1YER118C SFA1P32771 386 aa6.55□□□□□ -1.36
SHO1YER118C COT1P32798 439 aa6.55□□□□□ -1.36
SHO1YER118C TIF3P34167 436 aaKnown RBP6.55□□□□□ -1.36
SHO1YER118C TPO5P36029 618 aa6.55□□□□□ -1.36
SHO1YER118C ATP3P38077 311 aaKnown RBP6.55□□□□□ -1.36
SHO1YER118C KSP1P38691 1029 aaKnown RBP6.55□□□□□ -1.36
SHO1YER118C RRM3P38766 723 aa6.55□□□□□ -1.36
SHO1YER118C MND2P40577 368 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms