RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	ERV25	P54837	211 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	GCN5	Q03330	439 aa		4.14	□□□□□ -1.75
NUG1	YER006W	SSY1	Q03770	852 aa		4.14	□□□□□ -1.75
NUG1	YER006W	VPS38	Q05919	439 aa		4.14	□□□□□ -1.75
NUG1	YER006W	DUS3	Q06053	668 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	YLR455W	Q06188	304 aa		4.14	□□□□□ -1.75
NUG1	YER006W	YFT2	Q06676	274 aa		4.14	□□□□□ -1.75
NUG1	YER006W	DIB1	Q06819	143 aa	Predicted RBP	4.14	□□□□□ -1.75
NUG1	YER006W	LUC7	Q07508	261 aa	Predicted RBP	4.14	□□□□□ -1.75
NUG1	YER006W	CUE5	Q08412	411 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	HRK1	Q08732	759 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	FEX1	Q08913	375 aa		4.14	□□□□□ -1.75
NUG1	YER006W	ATG34	Q12292	412 aa		4.14	□□□□□ -1.75
NUG1	YER006W	DCN1	Q12395	269 aa		4.14	□□□□□ -1.75
NUG1	YER006W	ATG11	Q12527	1178 aa		4.14	□□□□□ -1.75
NUG1	YER006W	RPS17A	P02407	136 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	BI4	P03879	638 aa		4.14	□□□□□ -1.75
NUG1	YER006W	MRP2	P10663	115 aa	Predicted RBP	4.14	□□□□□ -1.75
NUG1	YER006W	PYC1	P11154	1178 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	RPS17B	P14127	136 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	FRS2	P15625	503 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	FUS3	P16892	353 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	VPS34	P22543	875 aa		4.14	□□□□□ -1.75
NUG1	YER006W	GSY1	P23337	708 aa		4.14	□□□□□ -1.75
NUG1	YER006W	CWH43	P25618	953 aa		4.14	□□□□□ -1.75
NUG1	YER006W	MCM5	P29496	775 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	MGM101	P32787	269 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	BEM3	P32873	1128 aa		4.14	□□□□□ -1.75
NUG1	YER006W	RPT5	P33297	434 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	GDH2	P33327	1092 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	PRX1	P34227	261 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	SPT10	P35208	640 aa		4.14	□□□□□ -1.75
NUG1	YER006W	NUP133	P36161	1157 aa		4.14	□□□□□ -1.75
NUG1	YER006W	CHK1	P38147	527 aa		4.14	□□□□□ -1.75
NUG1	YER006W	CBR1	P38626	284 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	SRP72	P38688	640 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	GND1	P38720	489 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	LNP1	P38878	278 aa		4.14	□□□□□ -1.75
NUG1	YER006W	FLC2	P39719	783 aa		4.14	□□□□□ -1.75
NUG1	YER006W	RPH1	P39956	796 aa		4.14	□□□□□ -1.75
NUG1	YER006W	SIP5	P40210	489 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	COS4	P43542	379 aa		4.14	□□□□□ -1.75
NUG1	YER006W	DUG1	P43616	481 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	AIP1	P46680	615 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	COS5	P47187	383 aa		4.14	□□□□□ -1.75
NUG1	YER006W	GTO1	P48239	356 aa		4.14	□□□□□ -1.75
NUG1	YER006W	NAS6	P50086	228 aa		4.14	□□□□□ -1.75
NUG1	YER006W	PSP2	P50109	593 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	YGR045C	P53229	120 aa		4.14	□□□□□ -1.75
NUG1	YER006W	SOL4	P53315	255 aa		4.14	□□□□□ -1.75
NUG1	YER006W	COS1	P53822	381 aa		4.14	□□□□□ -1.75
NUG1	YER006W	MRPS17	Q03246	237 aa	Predicted RBP	4.14	□□□□□ -1.75
NUG1	YER006W	RUB1	Q03919	77 aa		4.14	□□□□□ -1.75
NUG1	YER006W	HCR1	Q05775	265 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	PDR8	Q06149	701 aa		4.14	□□□□□ -1.75
NUG1	YER006W	RSC58	Q07979	502 aa		4.14	□□□□□ -1.75
NUG1	YER006W	INP54	Q08227	384 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	TRE1	Q08919	783 aa		4.14	□□□□□ -1.75
NUG1	YER006W	TMA46	Q12000	345 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	SMF3	Q12078	473 aa	Predicted RBP	4.14	□□□□□ -1.75
NUG1	YER006W	TMA7	Q3E764	64 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	RPL25	P04456	142 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	ABF1	P14164	731 aa		4.13	□□□□□ -1.75
NUG1	YER006W	CBF1	P17106	351 aa		4.13	□□□□□ -1.75
NUG1	YER006W	GAS1	P22146	559 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	CAD1	P24813	409 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	NFS1	P25374	497 aa		4.13	□□□□□ -1.75
NUG1	YER006W	PRD1	P25375	712 aa		4.13	□□□□□ -1.75
NUG1	YER006W	YCR101C	P25607	182 aa		4.13	□□□□□ -1.75
NUG1	YER006W	FUN26	P31381	517 aa		4.13	□□□□□ -1.75
NUG1	YER006W	IMP2'	P32351	346 aa		4.13	□□□□□ -1.75
NUG1	YER006W	MVD1	P32377	396 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	VPS17	P32913	551 aa		4.13	□□□□□ -1.75
NUG1	YER006W	RMA1	P36001	430 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	MRPL37	P36532	105 aa		4.13	□□□□□ -1.75
NUG1	YER006W	MAL33	P38157	468 aa		4.13	□□□□□ -1.75
NUG1	YER006W	BMT2	P38278	337 aa		4.13	□□□□□ -1.75
NUG1	YER006W	FTH1	P38310	465 aa		4.13	□□□□□ -1.75
NUG1	YER006W	CRP1	P38845	465 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	VAC8	P39968	578 aa		4.13	□□□□□ -1.75
NUG1	YER006W	GIM4	P40005	111 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	VMA13	P41807	478 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	YFL040W	P43562	540 aa		4.13	□□□□□ -1.75
NUG1	YER006W	FMP33	P46998	180 aa		4.13	□□□□□ -1.75
NUG1	YER006W	LIA1	P47120	325 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	AIM24	P47127	394 aa		4.13	□□□□□ -1.75
NUG1	YER006W	YBP2	P53169	641 aa		4.13	□□□□□ -1.75
NUG1	YER006W	YNR061C	P53747	219 aa		4.13	□□□□□ -1.75
NUG1	YER006W	YNL040W	P53960	456 aa	Predicted RBP	4.13	□□□□□ -1.75
NUG1	YER006W	DID2	P69771	204 aa		4.13	□□□□□ -1.75
NUG1	YER006W	SEN1	Q00416	2231 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	CWC27	Q02770	301 aa		4.13	□□□□□ -1.75
NUG1	YER006W	WAR1	Q03631	944 aa		4.13	□□□□□ -1.75
NUG1	YER006W	YDR179W-A	Q03983	463 aa		4.13	□□□□□ -1.75
NUG1	YER006W	YLR225C	Q05948	407 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
NUG1	YER006W	ZEO1	Q08245	113 aa		4.13	□□□□□ -1.75
NUG1	YER006W	SKI7	Q08491	747 aa	Predicted RBP	4.13	□□□□□ -1.75
NUG1	YER006W	DDC1	Q08949	612 aa		4.13	□□□□□ -1.75
NUG1	YER006W	PSF3	Q12146	194 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms