RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A IZH1Q03419 316 aa3.53□□□□□ -1.84
RIM1YCR028C-A SNO4Q04902 237 aa3.53□□□□□ -1.84
RIM1YCR028C-A YMR034CQ05131 434 aaPredicted RBP3.53□□□□□ -1.84
RIM1YCR028C-A BUD7Q08754 746 aa3.53□□□□□ -1.84
RIM1YCR028C-A HSP33Q08914 237 aaKnown RBP3.53□□□□□ -1.84
RIM1YCR028C-A HSP32Q08992 237 aa3.53□□□□□ -1.84
RIM1YCR028C-A YCR043CP25361 127 aa3.52□□□□□ -1.85
RIM1YCR028C-A AXL2P38928 823 aa3.52□□□□□ -1.85
RIM1YCR028C-A YIL152WP40455 235 aa3.52□□□□□ -1.85
RIM1YCR028C-A RPN11P43588 306 aaKnown RBP3.52□□□□□ -1.85
RIM1YCR028C-A IST1P53843 298 aaPredicted RBP3.52□□□□□ -1.85
RIM1YCR028C-A ECM16Q04217 1267 aaKnown RBP3.52□□□□□ -1.85
RIM1YCR028C-A UTP21Q06078 939 aaPredicted RBP3.52□□□□□ -1.85
RIM1YCR028C-A PSK2Q08217 1101 aa3.52□□□□□ -1.85
RIM1YCR028C-A DSE3Q08729 430 aa3.52□□□□□ -1.85
RIM1YCR028C-A YOL087CQ99247 1116 aa3.52□□□□□ -1.85
RIM1YCR028C-A CFT1Q06632 1357 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-JR2P47100 1755 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-ER2Q03619 1755 aa3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-MR1Q04214 1755 aa3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-MR2Q04670 1755 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-LR1Q12088 1755 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-NL1Q12112 1755 aa3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-GR1Q12141 1755 aa3.51□□□□□ -1.85
RIM1YCR028C-A TY1B-BLQ12490 1755 aa3.51□□□□□ -1.85
RIM1YCR028C-A RPO21P04050 1733 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A YBR085C-AO43137 85 aa3.51□□□□□ -1.85
RIM1YCR028C-A HXK2P04807 486 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A YFL068WP0CX99 160 aa3.51□□□□□ -1.85
RIM1YCR028C-A YLL066W-AP0CY00 160 aa3.51□□□□□ -1.85
RIM1YCR028C-A YLL067W-AP0CY01 160 aa3.51□□□□□ -1.85
RIM1YCR028C-A ARC40P38328 384 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A LEU5P38702 357 aa3.51□□□□□ -1.85
RIM1YCR028C-A MET30P39014 640 aa3.51□□□□□ -1.85
RIM1YCR028C-A TES1P41903 349 aaKnown RBP3.51□□□□□ -1.85
RIM1YCR028C-A YNL234WP53857 426 aa3.51□□□□□ -1.85
RIM1YCR028C-A CBK1P53894 756 aa3.51□□□□□ -1.85
RIM1YCR028C-A NUP53Q03790 475 aa3.51□□□□□ -1.85
RIM1YCR028C-A ARP10Q04549 284 aa3.51□□□□□ -1.85
RIM1YCR028C-A RCO1Q04779 684 aa3.51□□□□□ -1.85
RIM1YCR028C-A ECI1Q05871 280 aa3.51□□□□□ -1.85
RIM1YCR028C-A MCP2Q06567 569 aa3.51□□□□□ -1.85
RIM1YCR028C-A MLH2Q07980 695 aa3.51□□□□□ -1.85
RIM1YCR028C-A GPN2Q08726 347 aaPredicted RBP3.51□□□□□ -1.85
RIM1YCR028C-A CLC1P17891 233 aa3.5□□□□□ -1.85
RIM1YCR028C-A MRP20P32387 263 aa3.5□□□□□ -1.85
RIM1YCR028C-A IME2P32581 645 aa3.5□□□□□ -1.85
RIM1YCR028C-A KTR3P38130 404 aaPredicted RBP3.5□□□□□ -1.85
RIM1YCR028C-A PCL6P40038 420 aa3.5□□□□□ -1.85
RIM1YCR028C-A SEC24P40482 926 aaKnown RBP3.5□□□□□ -1.85
RIM1YCR028C-A HXT9P40885 567 aa3.5□□□□□ -1.85
RIM1YCR028C-A SGF73P53165 657 aa3.5□□□□□ -1.85
RIM1YCR028C-A NNF2P53253 936 aa3.5□□□□□ -1.85
RIM1YCR028C-A YTP1P53584 459 aa3.5□□□□□ -1.85
RIM1YCR028C-A DIG1Q03063 452 aaKnown RBP3.5□□□□□ -1.85
RIM1YCR028C-A MUB1Q03162 620 aa3.5□□□□□ -1.85
RIM1YCR028C-A ARP9Q05123 467 aa3.5□□□□□ -1.85
RIM1YCR028C-A NEW1Q08972 1196 aaKnown RBP3.5□□□□□ -1.85
RIM1YCR028C-A BUD3P25558 1636 aa3.5□□□□□ -1.85
RIM1YCR028C-A DRS2P39524 1355 aa3.5□□□□□ -1.85
RIM1YCR028C-A RPB2P08518 1224 aaKnown RBP3.49□□□□□ -1.85
RIM1YCR028C-A RPB8P20436 146 aa3.49□□□□□ -1.85
RIM1YCR028C-A SPE2P21182 396 aa3.49□□□□□ -1.85
RIM1YCR028C-A RER1P25560 188 aa3.49□□□□□ -1.85
RIM1YCR028C-A ALY1P36117 915 aa3.49□□□□□ -1.85
RIM1YCR028C-A MNN2P38069 597 aa3.49□□□□□ -1.85
RIM1YCR028C-A RFC1P38630 861 aaKnown RBP3.49□□□□□ -1.85
RIM1YCR028C-A BUR6P40096 142 aa3.49□□□□□ -1.85
RIM1YCR028C-A SLZ1P40167 298 aa3.49□□□□□ -1.85
RIM1YCR028C-A YFR016CP43597 1233 aaKnown RBP3.49□□□□□ -1.85
RIM1YCR028C-A SCS3P53012 380 aa3.49□□□□□ -1.85
RIM1YCR028C-A PIL1P53252 339 aaKnown RBP3.49□□□□□ -1.85
RIM1YCR028C-A ESBP6P53918 673 aa3.49□□□□□ -1.85
RIM1YCR028C-A TDA9Q04545 1251 aa3.49□□□□□ -1.85
RIM1YCR028C-A YDL144CQ07589 356 aa3.49□□□□□ -1.85
RIM1YCR028C-A YOL159CQ08300 171 aa3.49□□□□□ -1.85
RIM1YCR028C-A SSP2Q08646 371 aa3.49□□□□□ -1.85
RIM1YCR028C-A NBP2Q12163 236 aa3.49□□□□□ -1.85
RIM1YCR028C-A RPA190P10964 1664 aaKnown RBP3.49□□□□□ -1.85
RIM1YCR028C-A YOR093CQ12275 1648 aa3.48□□□□□ -1.85
RIM1YCR028C-A MET5P47169 1442 aa3.48□□□□□ -1.85
RIM1YCR028C-A KRS1P15180 591 aaKnown RBP3.48□□□□□ -1.85
RIM1YCR028C-A CLB2P24869 491 aa3.48□□□□□ -1.85
RIM1YCR028C-A DPB3P27344 201 aa3.48□□□□□ -1.85
RIM1YCR028C-A PDR3P33200 976 aa3.48□□□□□ -1.85
RIM1YCR028C-A EBP2P36049 427 aaKnown RBP3.48□□□□□ -1.85
RIM1YCR028C-A YJR061WP40355 935 aa3.48□□□□□ -1.85
RIM1YCR028C-A YIL169CP40442 995 aa3.48□□□□□ -1.85
RIM1YCR028C-A MEP2P41948 499 aa3.48□□□□□ -1.85
RIM1YCR028C-A DPB11P47027 764 aaPredicted RBP3.48□□□□□ -1.85
RIM1YCR028C-A SMC3P47037 1230 aa3.48□□□□□ -1.85
RIM1YCR028C-A FUM1P08417 488 aaKnown RBP3.47□□□□□ -1.85
RIM1YCR028C-A LCB1P25045 558 aaKnown RBP3.47□□□□□ -1.85
RIM1YCR028C-A CBF2P32504 956 aa3.47□□□□□ -1.85
RIM1YCR028C-A STV1P37296 890 aa3.47□□□□□ -1.85
RIM1YCR028C-A YIL060WP40519 144 aa3.47□□□□□ -1.85
RIM1YCR028C-A PKP1P40530 394 aa3.47□□□□□ -1.85
RIM1YCR028C-A INN1P53901 409 aa3.47□□□□□ -1.85
RIM1YCR028C-A YMR178WQ03219 274 aaKnown RBP3.47□□□□□ -1.85
RIM1YCR028C-A YMR254CQ04838 102 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms