RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C NDC80P40460 691 aa2.45□□□□□ -2.02
PRP6YBR055C BUD27P43573 796 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
PRP6YBR055C DLD2P46681 530 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C SAE2P46946 345 aa2.45□□□□□ -2.02
PRP6YBR055C DPB4Q04603 196 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C NTO1Q12311 748 aa2.45□□□□□ -2.02
PRP6YBR055C PCT1P13259 424 aa2.45□□□□□ -2.02
PRP6YBR055C SRP54P20424 541 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C KGD1P20967 1014 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C APN1P22936 367 aa2.45□□□□□ -2.02
PRP6YBR055C RRP43P25359 394 aaPredicted RBP2.45□□□□□ -2.02
PRP6YBR055C ADH7P25377 361 aa2.45□□□□□ -2.02
PRP6YBR055C TIF3P34167 436 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C GMH1P36125 273 aa2.45□□□□□ -2.02
PRP6YBR055C ECM10P39987 644 aa2.45□□□□□ -2.02
PRP6YBR055C MRX1P40050 688 aa2.45□□□□□ -2.02
PRP6YBR055C MEP1P40260 492 aa2.45□□□□□ -2.02
PRP6YBR055C GPI8P49018 411 aa2.45□□□□□ -2.02
PRP6YBR055C PRP43P53131 767 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C BOP3P53958 396 aa2.45□□□□□ -2.02
PRP6YBR055C PLM2Q04383 521 aa2.45□□□□□ -2.02
PRP6YBR055C YDR341CQ05506 607 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C SPE3Q12074 293 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C MDM20Q12387 796 aaKnown RBP2.45□□□□□ -2.02
PRP6YBR055C CTF3Q12748 733 aa2.45□□□□□ -2.02
PRP6YBR055C Q0010Q9ZZX9 128 aa2.45□□□□□ -2.02
PRP6YBR055C MYO2P19524 1574 aaKnown RBP2.44□□□□□ -2.02
PRP6YBR055C CPR2P23285 205 aa2.44□□□□□ -2.02
PRP6YBR055C MRPL9P31334 269 aa2.44□□□□□ -2.02
PRP6YBR055C ADE17P38009 592 aaKnown RBP2.44□□□□□ -2.02
PRP6YBR055C VBA2P38358 474 aaKnown RBP2.44□□□□□ -2.02
PRP6YBR055C DIA4P38705 446 aaPredicted RBP2.44□□□□□ -2.02
PRP6YBR055C YHR054CP38780 354 aa2.44□□□□□ -2.02
PRP6YBR055C YFR020WP43600 232 aa2.44□□□□□ -2.02
PRP6YBR055C DPB11P47027 764 aaPredicted RBP2.44□□□□□ -2.02
PRP6YBR055C COQ6P53318 479 aa2.44□□□□□ -2.02
PRP6YBR055C EOS1P53938 366 aa2.44□□□□□ -2.02
PRP6YBR055C YPL107WQ02873 248 aa2.44□□□□□ -2.02
PRP6YBR055C PCL8Q08966 492 aa2.44□□□□□ -2.02
PRP6YBR055C AHA1Q12449 350 aaKnown RBP2.44□□□□□ -2.02
PRP6YBR055C ZPS1Q12512 249 aa2.44□□□□□ -2.02
PRP6YBR055C HIR3P47171 1648 aa2.44□□□□□ -2.02
PRP6YBR055C ILV2P07342 687 aaKnown RBP2.44□□□□□ -2.02
PRP6YBR055C WHI2P12611 486 aa2.44□□□□□ -2.02
PRP6YBR055C BUD14P27637 709 aa2.44□□□□□ -2.02
PRP6YBR055C SMI1P32566 505 aa2.44□□□□□ -2.02
PRP6YBR055C SSE2P32590 693 aaKnown RBP2.44□□□□□ -2.02
PRP6YBR055C MRE11P32829 692 aa2.44□□□□□ -2.02
PRP6YBR055C CAK1P43568 368 aaPredicted RBP2.44□□□□□ -2.02
PRP6YBR055C IST1P53843 298 aaPredicted RBP2.44□□□□□ -2.02
PRP6YBR055C EFM6P53970 246 aa2.44□□□□□ -2.02
PRP6YBR055C SMX3P54999 86 aaPredicted RBP2.44□□□□□ -2.02
PRP6YBR055C SEC5P89102 971 aa2.44□□□□□ -2.02
PRP6YBR055C KAP120Q02932 1032 aa2.44□□□□□ -2.02
PRP6YBR055C WAR1Q03631 944 aa2.44□□□□□ -2.02
PRP6YBR055C KEL3Q08979 651 aaPredicted RBP2.44□□□□□ -2.02
PRP6YBR055C INP53Q12271 1107 aa2.44□□□□□ -2.02
PRP6YBR055C BPT1P14772 1559 aa2.44□□□□□ -2.02
PRP6YBR055C PPH22P23595 377 aa2.43□□□□□ -2.02
PRP6YBR055C HCM1P25364 564 aa2.43□□□□□ -2.02
PRP6YBR055C IMG1P25626 169 aa2.43□□□□□ -2.02
PRP6YBR055C HXT3P32466 567 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C YME1P32795 747 aa2.43□□□□□ -2.02
PRP6YBR055C UGP1P32861 499 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C YBR144CP34215 104 aa2.43□□□□□ -2.02
PRP6YBR055C LAS1P36146 502 aaPredicted RBP2.43□□□□□ -2.02
PRP6YBR055C FTH1P38310 465 aa2.43□□□□□ -2.02
PRP6YBR055C RRT2P38332 387 aa2.43□□□□□ -2.02
PRP6YBR055C ASG1P40467 964 aa2.43□□□□□ -2.02
PRP6YBR055C HOS2P53096 452 aaPredicted RBP2.43□□□□□ -2.02
PRP6YBR055C VPS73P53142 486 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C RAD33Q04231 177 aa2.43□□□□□ -2.02
PRP6YBR055C GFD1Q04839 188 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C RBS1Q05672 457 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C VTA1Q06263 330 aa2.43□□□□□ -2.02
PRP6YBR055C YOL159CQ08300 171 aa2.43□□□□□ -2.02
PRP6YBR055C YPL191CQ08930 360 aa2.43□□□□□ -2.02
PRP6YBR055C ATG9Q12142 997 aa2.43□□□□□ -2.02
PRP6YBR055C RPN5Q12250 445 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C SEC39Q12745 709 aa2.43□□□□□ -2.02
PRP6YBR055C PRD1P25375 712 aa2.43□□□□□ -2.02
PRP6YBR055C GSH1P32477 678 aa2.43□□□□□ -2.02
PRP6YBR055C HCS1P34243 683 aa2.43□□□□□ -2.02
PRP6YBR055C THI2P38141 450 aa2.43□□□□□ -2.02
PRP6YBR055C PKP1P40530 394 aa2.43□□□□□ -2.02
PRP6YBR055C PTR3P43606 678 aa2.43□□□□□ -2.02
PRP6YBR055C FAR3P46671 204 aa2.43□□□□□ -2.02
PRP6YBR055C MDE1P47095 244 aa2.43□□□□□ -2.02
PRP6YBR055C CAF130P53280 1122 aaPredicted RBP2.43□□□□□ -2.02
PRP6YBR055C YMR206WQ03695 313 aa2.43□□□□□ -2.02
PRP6YBR055C PDS5Q04264 1277 aa2.43□□□□□ -2.02
PRP6YBR055C HEL2Q05580 639 aaKnown RBP2.43□□□□□ -2.02
PRP6YBR055C YLR456WQ06199 204 aa2.43□□□□□ -2.02
PRP6YBR055C MMR1Q06324 491 aa2.43□□□□□ -2.02
PRP6YBR055C YOL073CQ08232 322 aa2.43□□□□□ -2.02
PRP6YBR055C CFT2Q12102 859 aaPredicted RBP2.43□□□□□ -2.02
PRP6YBR055C ATG2P53855 1592 aa2.43□□□□□ -2.02
PRP6YBR055C PET111P08468 800 aa2.42□□□□□ -2.02
PRP6YBR055C VMA2P16140 517 aaKnown RBP2.42□□□□□ -2.02
PRP6YBR055C MSP1P28737 362 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms