RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTA6	YPL074W	YHR213W-A	Q8TGT4	77 aa		4.87	□□□□□ -1.63
YTA6	YPL074W	TDH1	P00360	332 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	AI2	P03876	854 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	PDC5	P16467	563 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	CHL1	P22516	861 aa	Predicted RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	VAM7	P32912	316 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	AKL1	P38080	1108 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	VMA13	P41807	478 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	MRPS18	P42847	217 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	RPS12	P48589	143 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	YGL036W	P53185	909 aa	Predicted RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	ALO1	P54783	526 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
YTA6	YPL074W	SEG1	Q04279	960 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	PLM2	Q04383	521 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	RTT103	Q05543	409 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	ASA1	Q06822	443 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	ACM1	Q08981	209 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	YPR202W	Q08993	238 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	ULA1	Q12059	462 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	PAA1	Q12447	191 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	MET2	P08465	486 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	MIS1	P09440	975 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	NFT1	P0CE68	1218 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	ARO3	P14843	370 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	IDI1	P15496	288 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	CNB1	P25296	175 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	RRT12	P25381	491 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	CPR3	P25719	182 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	HEM3	P28789	327 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	PTP2	P29461	750 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	CHS3	P29465	1165 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	GPI10	P30777	616 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	YKL100C	P34248	587 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	WHI3	P34761	661 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	SEA4	P38164	1038 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	ECM2	P38241	364 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	YBR238C	P38330	731 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	YER010C	P40011	234 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	PHM8	P40025	321 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	UBP7	P40453	1071 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	IMA5	P40884	581 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	YJL107C	P42947	387 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	YFL034W	P43564	1073 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	RPS7B	P48164	190 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	MND1	P53102	219 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	NUT1	P53114	1132 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	PBP1	P53297	722 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	HXT15	P54854	567 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	NGL2	Q03264	515 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	SWF1	Q04629	336 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	ESF1	Q06344	628 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	THI21	Q08975	551 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	LYS21	Q12122	440 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	RPN5	Q12250	445 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	HER1	Q12276	1246 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	YOR214C	Q12282	236 aa		4.86	□□□□□ -1.63
YTA6	YPL074W	RRP12	Q12754	1228 aa	Known RBP	4.86	□□□□□ -1.63
YTA6	YPL074W	RPL25	P04456	142 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	MET6	P05694	767 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	MKS1	P34072	584 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	TGL4	P36165	910 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	GRX7	P38068	203 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	KSP1	P38691	1029 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	GOS1	P38736	223 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	QNS1	P38795	714 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	STM1	P39015	273 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	CEM1	P39525	442 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	PSY2	P40164	858 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	PFK26	P40433	827 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	CCT8	P47079	568 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	LIA1	P47120	325 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	THI11	P47183	340 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	PIB2	P53191	635 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	RSM27	P53305	110 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	SNF12	P53628	566 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	RCF2	P53721	224 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	RSC9	Q03124	581 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	FMN1	Q03778	218 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	DPB4	Q04603	196 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	YMR226C	Q05016	267 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	FMP45	Q07651	309 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	FRE3	Q08905	711 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	FMP40	Q08968	688 aa	Predicted RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	REC8	Q12188	680 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	YDR061W	Q12298	539 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	ATP14	Q12349	124 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	GCN4	P03069	281 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	RPL22A	P05749	121 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	ERG11	P10614	530 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	MET8	P15807	274 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	PET309	P32522	965 aa	Predicted RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	ECM25	P32525	599 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	UTR4	P32626	227 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	EAP1	P36041	632 aa	Known RBP	4.85	□□□□□ -1.63
YTA6	YPL074W	SCO2	P38072	301 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	YBR285W	P38354	144 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	SUL1	P38359	859 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	PCA1	P38360	1216 aa		4.85	□□□□□ -1.63
YTA6	YPL074W	ATG7	P38862	630 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms