RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeastyeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTA6YPL074W RQC2Q12532 1038 aaKnown RBP7.81□□□□□ -1.16
YTA6YPL074W BFR2Q06631 534 aaKnown RBP7.77□□□□□ -1.17
YTA6YPL074W NOP2P40991 618 aaKnown RBP7.17□□□□□ -1.26
YTA6YPL074W EBP2P36049 427 aaKnown RBP7.03□□□□□ -1.28
YTA6YPL074W URN1Q06525 465 aaKnown RBP7.01□□□□□ -1.29
YTA6YPL074W CAB3P36076 571 aa7.01□□□□□ -1.29
YTA6YPL074W SIS2P36024 562 aa6.89□□□□□ -1.31
YTA6YPL074W NSR1P27476 414 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
YTA6YPL074W TAF7Q05021 590 aa6.78□□□□□ -1.32
YTA6YPL074W AVT3P36062 692 aa6.75□□□□□ -1.33
YTA6YPL074W YPR148CQ06523 435 aa6.74□□□□□ -1.33
YTA6YPL074W YFR016CP43597 1233 aaKnown RBP6.67□□□□□ -1.34
YTA6YPL074W RPS0BP46654 252 aaKnown RBP6.52□□□□□ -1.37
YTA6YPL074W SKI3P17883 1432 aaKnown RBP6.52□□□□□ -1.37
YTA6YPL074W CWC22P53333 577 aaKnown RBP6.49□□□□□ -1.37
YTA6YPL074W DRS1P32892 752 aaKnown RBP6.46□□□□□ -1.37
YTA6YPL074W SPA2P23201 1466 aaKnown RBP6.44□□□□□ -1.38
YTA6YPL074W DIP2Q12220 943 aaPredicted RBP6.43□□□□□ -1.38
YTA6YPL074W KRI1P42846 591 aaKnown RBP6.43□□□□□ -1.38
YTA6YPL074W TCB2P48231 1178 aa6.41□□□□□ -1.38
YTA6YPL074W RSE1Q04693 1361 aaKnown RBP6.39□□□□□ -1.39
YTA6YPL074W LEO1P38439 464 aa6.39□□□□□ -1.39
YTA6YPL074W AIM44Q99299 758 aa6.38□□□□□ -1.39
YTA6YPL074W MNN4P36044 1178 aa6.37□□□□□ -1.39
YTA6YPL074W ENP1P38333 483 aaKnown RBP6.34□□□□□ -1.39
YTA6YPL074W YRB30P53107 440 aaPredicted RBP6.34□□□□□ -1.39
YTA6YPL074W TCB3Q03640 1545 aaKnown RBP6.31□□□□□ -1.4
YTA6YPL074W ENV11P53246 860 aa6.3□□□□□ -1.4
YTA6YPL074W SSN2P38931 1420 aa6.3□□□□□ -1.4
YTA6YPL074W DEF1P35732 738 aaKnown RBP6.28□□□□□ -1.4
YTA6YPL074W SEC3P33332 1336 aaKnown RBP6.27□□□□□ -1.41
YTA6YPL074W CLC1P17891 233 aa6.27□□□□□ -1.41
YTA6YPL074W NUG1P40010 520 aaKnown RBP6.24□□□□□ -1.41
YTA6YPL074W SPT7P35177 1332 aa6.24□□□□□ -1.41
YTA6YPL074W SPT21P35209 758 aa6.24□□□□□ -1.41
YTA6YPL074W FPR3P38911 411 aaKnown RBP6.24□□□□□ -1.41
YTA6YPL074W PSH1Q12161 406 aa6.23□□□□□ -1.41
YTA6YPL074W YGR130CP53278 816 aa6.22□□□□□ -1.41
YTA6YPL074W QCR6P00127 147 aa6.22□□□□□ -1.41
YTA6YPL074W NOP53Q12080 455 aaKnown RBP6.21□□□□□ -1.42
YTA6YPL074W IME2P32581 645 aa6.2□□□□□ -1.42
YTA6YPL074W SGS1P35187 1447 aa6.19□□□□□ -1.42
YTA6YPL074W RNA1P11745 407 aaKnown RBP6.19□□□□□ -1.42
YTA6YPL074W RLF2Q12495 606 aa6.18□□□□□ -1.42
YTA6YPL074W FPR4Q06205 392 aaPredicted RBP6.18□□□□□ -1.42
YTA6YPL074W STH1P32597 1359 aa6.16□□□□□ -1.42
YTA6YPL074W NAP1P25293 417 aaKnown RBP6.16□□□□□ -1.42
YTA6YPL074W TFA1P36100 482 aa6.15□□□□□ -1.42
YTA6YPL074W IOC4Q04213 475 aa6.15□□□□□ -1.42
YTA6YPL074W SPT2P06843 333 aaPredicted RBP6.15□□□□□ -1.43
YTA6YPL074W SAS10Q12136 610 aaPredicted RBP6.13□□□□□ -1.43
YTA6YPL074W PRS1P32895 427 aaKnown RBP6.12□□□□□ -1.43
YTA6YPL074W RLP24Q07915 199 aaKnown RBP6.11□□□□□ -1.43
YTA6YPL074W EAF7P53911 425 aaKnown RBP6.11□□□□□ -1.43
YTA6YPL074W FUN12P39730 1002 aaKnown RBP6.1□□□□□ -1.43
YTA6YPL074W OPY1P38271 328 aa6.08□□□□□ -1.44
YTA6YPL074W POL5P39985 1022 aaKnown RBP6.08□□□□□ -1.44
YTA6YPL074W SPC110P32380 944 aa6.06□□□□□ -1.44
YTA6YPL074W CFT1Q06632 1357 aaKnown RBP6.06□□□□□ -1.44
YTA6YPL074W RIX1P38883 763 aaPredicted RBP6.06□□□□□ -1.44
YTA6YPL074W IFH1P39520 1085 aa6.06□□□□□ -1.44
YTA6YPL074W MTC1P47018 478 aaKnown RBP6.05□□□□□ -1.44
YTA6YPL074W YTA7P40340 1379 aa6.05□□□□□ -1.44
YTA6YPL074W UFD4P33202 1483 aa6.05□□□□□ -1.44
YTA6YPL074W MMS22Q06164 1454 aa6.05□□□□□ -1.44
YTA6YPL074W INO80P53115 1489 aa6.04□□□□□ -1.44
YTA6YPL074W HSP82P02829 709 aaKnown RBP6.03□□□□□ -1.44
YTA6YPL074W NMD2P38798 1089 aaKnown RBP6.03□□□□□ -1.44
YTA6YPL074W SWE1P32944 819 aa6.02□□□□□ -1.44
YTA6YPL074W RPC31P17890 251 aa6.02□□□□□ -1.45
YTA6YPL074W PAF1P38351 445 aa6.02□□□□□ -1.45
YTA6YPL074W YNL011CP53980 444 aa6.02□□□□□ -1.45
YTA6YPL074W GRX3Q03835 250 aa6.01□□□□□ -1.45
YTA6YPL074W SNF7P39929 240 aaKnown RBP6.01□□□□□ -1.45
YTA6YPL074W RAD26P40352 1085 aa6□□□□□ -1.45
YTA6YPL074W FAP1P53971 965 aa6□□□□□ -1.45
YTA6YPL074W DOS2P54858 310 aa6□□□□□ -1.45
YTA6YPL074W ECM5Q03214 1411 aa5.99□□□□□ -1.45
YTA6YPL074W LEU3P08638 886 aa5.99□□□□□ -1.45
YTA6YPL074W RPN1P38764 993 aaKnown RBP5.99□□□□□ -1.45
YTA6YPL074W XRN1P22147 1528 aaKnown RBP5.99□□□□□ -1.45
YTA6YPL074W PLP2Q12017 286 aa5.99□□□□□ -1.45
YTA6YPL074W ETT1Q08421 412 aaKnown RBP5.97□□□□□ -1.45
YTA6YPL074W SPP41P38904 1435 aa5.97□□□□□ -1.45
YTA6YPL074W MON2P48563 1636 aaPredicted RBP5.97□□□□□ -1.45
YTA6YPL074W PIL1P53252 339 aaKnown RBP5.97□□□□□ -1.45
YTA6YPL074W VPS4P52917 437 aa5.96□□□□□ -1.45
YTA6YPL074W CTR9P89105 1077 aa5.96□□□□□ -1.45
YTA6YPL074W CHD1P32657 1468 aa5.95□□□□□ -1.46
YTA6YPL074W MSH3P25336 1018 aa5.95□□□□□ -1.46
YTA6YPL074W NOP58Q12499 511 aaKnown RBP5.95□□□□□ -1.46
YTA6YPL074W ROX1P25042 368 aa5.94□□□□□ -1.46
YTA6YPL074W MSH4P40965 878 aaPredicted RBP5.94□□□□□ -1.46
YTA6YPL074W SIC1P38634 284 aa5.93□□□□□ -1.46
YTA6YPL074W SMC3P47037 1230 aa5.93□□□□□ -1.46
YTA6YPL074W SNU71P53207 620 aaKnown RBP5.93□□□□□ -1.46
YTA6YPL074W NNF2P53253 936 aa5.93□□□□□ -1.46
YTA6YPL074W YPP1P46951 817 aa5.92□□□□□ -1.46
YTA6YPL074W TOP2P06786 1428 aaKnown RBP5.92□□□□□ -1.46
YTA6YPL074W SLN1P39928 1220 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms