RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W RPF2P36160 344 aaKnown RBP3.28□□□□□ -1.88
BUD21YOR078W KRE9P39005 276 aa3.28□□□□□ -1.88
BUD21YOR078W GPP2P40106 250 aaKnown RBP3.28□□□□□ -1.88
BUD21YOR078W AZF1P41696 914 aa3.28□□□□□ -1.88
BUD21YOR078W NPA3P47122 385 aa3.28□□□□□ -1.88
BUD21YOR078W ILM1P47155 203 aa3.28□□□□□ -1.88
BUD21YOR078W YGL082WP53155 381 aa3.28□□□□□ -1.88
BUD21YOR078W ASI1P54074 624 aa3.28□□□□□ -1.88
BUD21YOR078W COG4Q06096 861 aa3.28□□□□□ -1.88
BUD21YOR078W RRP9Q06506 573 aaKnown RBP3.28□□□□□ -1.88
BUD21YOR078W POS5Q06892 414 aa3.28□□□□□ -1.88
BUD21YOR078W MCH4Q08268 501 aa3.28□□□□□ -1.88
BUD21YOR078W SLX4Q12098 748 aa3.28□□□□□ -1.88
BUD21YOR078W RUD3Q12234 484 aaKnown RBP3.28□□□□□ -1.88
BUD21YOR078W ATG2P53855 1592 aa3.28□□□□□ -1.88
BUD21YOR078W DNF2Q12675 1612 aa3.27□□□□□ -1.89
BUD21YOR078W RNR2P09938 399 aaKnown RBP3.27□□□□□ -1.89
BUD21YOR078W YML002WP0CF17 737 aa3.27□□□□□ -1.89
BUD21YOR078W CLB4P24871 460 aa3.27□□□□□ -1.89
BUD21YOR078W CDC10P25342 322 aaKnown RBP3.27□□□□□ -1.89
BUD21YOR078W KAR9P32526 644 aa3.27□□□□□ -1.89
BUD21YOR078W SHC1P39000 512 aa3.27□□□□□ -1.89
BUD21YOR078W ARB1P40024 610 aaKnown RBP3.27□□□□□ -1.89
BUD21YOR078W YJL070CP40361 888 aa3.27□□□□□ -1.89
BUD21YOR078W SEC27P41811 889 aaKnown RBP3.27□□□□□ -1.89
BUD21YOR078W LSG1P53145 640 aaKnown RBP3.27□□□□□ -1.89
BUD21YOR078W TIM11P81449 96 aaPredicted RBP3.27□□□□□ -1.89
BUD21YOR078W HOT1Q03213 719 aa3.27□□□□□ -1.89
BUD21YOR078W VPS20Q04272 221 aa3.27□□□□□ -1.89
BUD21YOR078W KRE28Q04431 385 aa3.27□□□□□ -1.89
BUD21YOR078W ECI1Q05871 280 aa3.27□□□□□ -1.89
BUD21YOR078W PSR1Q07800 427 aa3.27□□□□□ -1.89
BUD21YOR078W CMS1Q07897 291 aaKnown RBP3.27□□□□□ -1.89
BUD21YOR078W ATG9Q12142 997 aa3.27□□□□□ -1.89
BUD21YOR078W BRR1Q99177 341 aaPredicted RBP3.27□□□□□ -1.89
BUD21YOR078W TY3B-GQ99315 1547 aa3.27□□□□□ -1.89
BUD21YOR078W YRF1-4O13559 1382 aa3.26□□□□□ -1.89
BUD21YOR078W LYS2P07702 1392 aa3.26□□□□□ -1.89
BUD21YOR078W PSK1P31374 1356 aa3.26□□□□□ -1.89
BUD21YOR078W SWI1P09547 1314 aa3.26□□□□□ -1.89
BUD21YOR078W PDR18P53756 1333 aa3.26□□□□□ -1.89
BUD21YOR078W HAP1P0CE41 1502 aa3.26□□□□□ -1.89
BUD21YOR078W SUI3P09064 285 aaKnown RBP3.26□□□□□ -1.89
BUD21YOR078W FAR1P21268 830 aa3.26□□□□□ -1.89
BUD21YOR078W PPG1P32838 368 aa3.26□□□□□ -1.89
BUD21YOR078W SEC66P33754 206 aa3.26□□□□□ -1.89
BUD21YOR078W TFC3P34111 1160 aa3.26□□□□□ -1.89
BUD21YOR078W LHS1P36016 881 aa3.26□□□□□ -1.89
BUD21YOR078W YJR142WP47173 342 aa3.26□□□□□ -1.89
BUD21YOR078W TRS31Q03337 283 aa3.26□□□□□ -1.89
BUD21YOR078W RBA50Q04418 439 aa3.26□□□□□ -1.89
BUD21YOR078W YMR111CQ04461 462 aaPredicted RBP3.26□□□□□ -1.89
BUD21YOR078W ERB1Q04660 807 aaKnown RBP3.26□□□□□ -1.89
BUD21YOR078W YDR341CQ05506 607 aaKnown RBP3.26□□□□□ -1.89
BUD21YOR078W FRE3Q08905 711 aa3.26□□□□□ -1.89
BUD21YOR078W FAP7Q12055 197 aaPredicted RBP3.26□□□□□ -1.89
BUD21YOR078W JIP3O13555 125 aa3.25□□□□□ -1.89
BUD21YOR078W GCD2P12754 651 aaPredicted RBP3.25□□□□□ -1.89
BUD21YOR078W KRS1P15180 591 aaKnown RBP3.25□□□□□ -1.89
BUD21YOR078W BUD14P27637 709 aa3.25□□□□□ -1.89
BUD21YOR078W RPN2P32565 945 aaKnown RBP3.25□□□□□ -1.89
BUD21YOR078W RAD5P32849 1169 aaPredicted RBP3.25□□□□□ -1.89
BUD21YOR078W LIN1P38852 340 aaPredicted RBP3.25□□□□□ -1.89
BUD21YOR078W CTK3P46963 296 aaPredicted RBP3.25□□□□□ -1.89
BUD21YOR078W UBP8P50102 471 aa3.25□□□□□ -1.89
BUD21YOR078W YNR029CP53729 429 aaKnown RBP3.25□□□□□ -1.89
BUD21YOR078W ESF2P53743 316 aaKnown RBP3.25□□□□□ -1.89
BUD21YOR078W FAR8Q05040 523 aa3.25□□□□□ -1.89
BUD21YOR078W STE23Q06010 1027 aa3.25□□□□□ -1.89
BUD21YOR078W MRD1Q06106 887 aaKnown RBP3.25□□□□□ -1.89
BUD21YOR078W ATG26Q06321 1198 aa3.25□□□□□ -1.89
BUD21YOR078W ABP140Q08641 628 aaKnown RBP3.25□□□□□ -1.89
BUD21YOR078W RMP1Q12530 201 aa3.25□□□□□ -1.89
BUD21YOR078W YBR298C-AQ8TGK4 73 aa3.25□□□□□ -1.89
BUD21YOR078W ULS1Q08562 1619 aa3.25□□□□□ -1.89
BUD21YOR078W NAT1P12945 854 aaKnown RBP3.24□□□□□ -1.89
BUD21YOR078W PMR1P13586 950 aa3.24□□□□□ -1.89
BUD21YOR078W PMS1P14242 873 aa3.24□□□□□ -1.89
BUD21YOR078W TAL1P15019 335 aaKnown RBP3.24□□□□□ -1.89
BUD21YOR078W DPB3P27344 201 aa3.24□□□□□ -1.89
BUD21YOR078W RPC19P28000 142 aaKnown RBP3.24□□□□□ -1.89
BUD21YOR078W HIR2P32480 875 aa3.24□□□□□ -1.89
BUD21YOR078W SIP1P32578 815 aa3.24□□□□□ -1.89
BUD21YOR078W PTH2P34222 208 aa3.24□□□□□ -1.89
BUD21YOR078W KDX1P36005 433 aa3.24□□□□□ -1.89
BUD21YOR078W ECM4P36156 370 aa3.24□□□□□ -1.89
BUD21YOR078W YSW1P38280 609 aa3.24□□□□□ -1.89
BUD21YOR078W YLF2P38746 405 aa3.24□□□□□ -1.89
BUD21YOR078W FAA2P39518 744 aa3.24□□□□□ -1.89
BUD21YOR078W RTR1P40084 226 aaPredicted RBP3.24□□□□□ -1.89
BUD21YOR078W GCN20P43535 752 aaKnown RBP3.24□□□□□ -1.89
BUD21YOR078W YKU80Q04437 629 aa3.24□□□□□ -1.89
BUD21YOR078W MMR1Q06324 491 aa3.24□□□□□ -1.89
BUD21YOR078W DRS2P39524 1355 aa3.24□□□□□ -1.89
BUD21YOR078W RAV1P47104 1357 aa3.24□□□□□ -1.89
BUD21YOR078W REV1P12689 985 aa3.23□□□□□ -1.89
BUD21YOR078W TYR1P20049 452 aa3.23□□□□□ -1.89
BUD21YOR078W RPO26P20435 155 aa3.23□□□□□ -1.89
BUD21YOR078W YEL043WP32618 956 aa3.23□□□□□ -1.89
BUD21YOR078W NPL6P32832 435 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms