RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W COX6P00427 148 aa14.41□□□□□ -0.1
SHR5YOL110W APA1P16550 321 aaKnown RBP14.41□□□□□ -0.1
SHR5YOL110W RPB4P20433 221 aaPredicted RBP14.41□□□□□ -0.1
SHR5YOL110W MRPL9P31334 269 aa14.41□□□□□ -0.1
SHR5YOL110W SPS19P32573 292 aaKnown RBP14.41□□□□□ -0.1
SHR5YOL110W MRE11P32829 692 aa14.41□□□□□ -0.1
SHR5YOL110W SPT23P35210 1082 aa14.41□□□□□ -0.1
SHR5YOL110W ASK1P35734 292 aa14.41□□□□□ -0.1
SHR5YOL110W MGS1P40151 587 aa14.41□□□□□ -0.1
SHR5YOL110W ARP4P80428 489 aa14.41□□□□□ -0.1
SHR5YOL110W NHP10Q03435 203 aa14.41□□□□□ -0.1
SHR5YOL110W CLU1Q03690 1277 aaKnown RBP14.41□□□□□ -0.1
SHR5YOL110W YDR131CQ03899 556 aa14.41□□□□□ -0.1
SHR5YOL110W SEM1O94742 89 aa14.4□□□□□ -0.1
SHR5YOL110W PHO3P24031 467 aa14.4□□□□□ -0.1
SHR5YOL110W PRP18P33411 251 aaPredicted RBP14.4□□□□□ -0.1
SHR5YOL110W PMT1P33775 817 aa14.4□□□□□ -0.1
SHR5YOL110W RRN3P36070 627 aa14.4□□□□□ -0.1
SHR5YOL110W DSF2P38213 736 aa14.4□□□□□ -0.1
SHR5YOL110W PPX1P38698 397 aa14.4□□□□□ -0.1
SHR5YOL110W SWC4P53201 476 aa14.4□□□□□ -0.1
SHR5YOL110W FRE4P53746 719 aa14.4□□□□□ -0.1
SHR5YOL110W TDA7P53882 636 aaPredicted RBP14.4□□□□□ -0.1
SHR5YOL110W UBX3Q12229 455 aa14.4□□□□□ -0.1
SHR5YOL110W MDY2Q12285 212 aa14.4□□□□□ -0.1
SHR5YOL110W SEC53P07283 254 aaKnown RBP14.39□□□□□ -0.11
SHR5YOL110W YMR085WP0CF18 432 aa14.39□□□□□ -0.11
SHR5YOL110W SBP1P10080 294 aaKnown RBP14.39□□□□□ -0.11
SHR5YOL110W YSC84P32793 468 aa14.39□□□□□ -0.11
SHR5YOL110W ARP1P38696 384 aa14.39□□□□□ -0.11
SHR5YOL110W SET2P46995 733 aaKnown RBP14.39□□□□□ -0.11
SHR5YOL110W YMR155WQ03795 547 aa14.39□□□□□ -0.11
SHR5YOL110W BLS1Q06071 122 aa14.39□□□□□ -0.11
SHR5YOL110W MRH1Q12117 320 aaPredicted RBP14.39□□□□□ -0.11
SHR5YOL110W MEX67Q99257 599 aaKnown RBP14.39□□□□□ -0.11
SHR5YOL110W GAL11P19659 1081 aa14.38□□□□□ -0.11
SHR5YOL110W RPC19P28000 142 aaKnown RBP14.38□□□□□ -0.11
SHR5YOL110W HSM3P38348 480 aa14.38□□□□□ -0.11
SHR5YOL110W MUP3P38734 546 aa14.38□□□□□ -0.11
SHR5YOL110W PCL5P38794 229 aa14.38□□□□□ -0.11
SHR5YOL110W YHR078WP38799 552 aa14.38□□□□□ -0.11
SHR5YOL110W AXL1P40851 1208 aa14.38□□□□□ -0.11
SHR5YOL110W NPY1P53164 384 aa14.38□□□□□ -0.11
SHR5YOL110W RPC11Q04307 110 aaPredicted RBP14.38□□□□□ -0.11
SHR5YOL110W SEC10Q06245 871 aa14.38□□□□□ -0.11
SHR5YOL110W HBT1Q07653 1046 aaKnown RBP14.38□□□□□ -0.11
SHR5YOL110W APC9Q12107 265 aa14.38□□□□□ -0.11
SHR5YOL110W ICT1Q12385 394 aa14.38□□□□□ -0.11
SHR5YOL110W GTT2Q12390 233 aa14.38□□□□□ -0.11
SHR5YOL110W VAC17P25591 423 aa14.37□□□□□ -0.11
SHR5YOL110W DBP8P38719 431 aa14.37□□□□□ -0.11
SHR5YOL110W EFM1P38732 585 aa14.37□□□□□ -0.11
SHR5YOL110W TIM17P39515 158 aa14.37□□□□□ -0.11
SHR5YOL110W MAD3P47074 515 aa14.37□□□□□ -0.11
SHR5YOL110W AQR1P53943 586 aa14.37□□□□□ -0.11
SHR5YOL110W EPT1P22140 391 aa14.36□□□□□ -0.11
SHR5YOL110W SFP1P32432 683 aa14.36□□□□□ -0.11
SHR5YOL110W YDR089WP38966 869 aa14.36□□□□□ -0.11
SHR5YOL110W MRX1P40050 688 aa14.36□□□□□ -0.11
SHR5YOL110W GCD14P46959 383 aaPredicted RBP14.36□□□□□ -0.11
SHR5YOL110W NPL3Q01560 414 aaKnown RBP RIP-Chip data14.36□□□□□ -0.11not detected
SHR5YOL110W TAF12Q03761 539 aa14.36□□□□□ -0.11
SHR5YOL110W TVP15Q03860 143 aa14.36□□□□□ -0.11
SHR5YOL110W ALR1Q08269 859 aa14.36□□□□□ -0.11
SHR5YOL110W YPR089WO13585 888 aa14.35□□□□□ -0.11
SHR5YOL110W CPA1P07258 411 aaKnown RBP14.35□□□□□ -0.11
SHR5YOL110W YCR090CP25654 182 aaKnown RBP14.35□□□□□ -0.11
SHR5YOL110W PTM1P32857 523 aa14.35□□□□□ -0.11
SHR5YOL110W FMO1P38866 432 aa14.35□□□□□ -0.11
SHR5YOL110W AIF1P52923 378 aa14.35□□□□□ -0.11
SHR5YOL110W VPS16Q03308 798 aa14.35□□□□□ -0.11
SHR5YOL110W CCE1Q03702 353 aa14.35□□□□□ -0.11
SHR5YOL110W SPO20Q04359 397 aa14.35□□□□□ -0.11
SHR5YOL110W NOB1Q08444 459 aaKnown RBP14.35□□□□□ -0.11
SHR5YOL110W TMA46Q12000 345 aaKnown RBP14.35□□□□□ -0.11
SHR5YOL110W SMF3Q12078 473 aaPredicted RBP14.35□□□□□ -0.11
SHR5YOL110W YOR012WQ12351 137 aa14.35□□□□□ -0.11
SHR5YOL110W YPT6Q99260 215 aa14.35□□□□□ -0.11
SHR5YOL110W HEM2P05373 342 aa14.34□□□□□ -0.11
SHR5YOL110W RHO2P06781 192 aa14.34□□□□□ -0.11
SHR5YOL110W NMT1P14743 455 aa14.34□□□□□ -0.11
SHR5YOL110W HSC82P15108 705 aaKnown RBP14.34□□□□□ -0.11
SHR5YOL110W BAS1P22035 811 aa14.34□□□□□ -0.11
SHR5YOL110W VAN1P23642 535 aa14.34□□□□□ -0.11
SHR5YOL110W NIP1P32497 812 aaKnown RBP14.34□□□□□ -0.11
SHR5YOL110W YFR018CP43599 363 aa14.34□□□□□ -0.11
SHR5YOL110W NNF1P47149 201 aa14.34□□□□□ -0.11
SHR5YOL110W FAA4P47912 694 aaKnown RBP14.34□□□□□ -0.11
SHR5YOL110W ART5P53244 586 aaKnown RBP14.34□□□□□ -0.11
SHR5YOL110W CLD1P53264 445 aa14.34□□□□□ -0.11
SHR5YOL110W SMA1Q02651 245 aa14.34□□□□□ -0.11
SHR5YOL110W GOT1Q03554 138 aa14.34□□□□□ -0.11
SHR5YOL110W OPI10Q08202 246 aa14.34□□□□□ -0.11
SHR5YOL110W GNT1Q12096 491 aa14.34□□□□□ -0.11
SHR5YOL110W STB3Q12427 513 aa14.34□□□□□ -0.11
SHR5YOL110W NOT5Q12514 560 aaPredicted RBP14.34□□□□□ -0.11
SHR5YOL110W SNT1P25357 1226 aa14.33□□□□□ -0.12
SHR5YOL110W TIP20P33891 701 aa14.33□□□□□ -0.12
SHR5YOL110W HEK2P38199 381 aaKnown RBP RIP-Chip data14.33□□□□□ -0.12not detected
SHR5YOL110W TAE1P38340 232 aa14.33□□□□□ -0.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms