RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT8	YLR055C	GCD11	P32481	527 aa	Known RBP	11.05	□□□□□ -0.64
SPT8	YLR055C	RPN2	P32565	945 aa	Known RBP	11.05	□□□□□ -0.64
SPT8	YLR055C	PEX6	P33760	1030 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	YHI9	P38765	294 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	ECM10	P39987	644 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	YAT2	P40017	923 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	PRM2	P40534	656 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	ORM1	P53224	222 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	DSL1	P53847	754 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	SED5	Q01590	340 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	INA17	Q02888	182 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	HSP31	Q04432	237 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	ULA1	Q12059	462 aa		11.05	□□□□□ -0.64
SPT8	YLR055C	ATP6	P00854	259 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	INO1	P11986	533 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	TYE7	P33122	291 aa	Predicted RBP	11.04	□□□□□ -0.64
SPT8	YLR055C	TSA1	P34760	196 aa	Known RBP	11.04	□□□□□ -0.64
SPT8	YLR055C	YHR182W	P38870	785 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	IES5	P40060	125 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	VHR1	P40522	640 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	CEG1	Q01159	459 aa	Predicted RBP	11.04	□□□□□ -0.64
SPT8	YLR055C	HRD3	Q05787	833 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	YCS4	Q06156	1176 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	LOT6	Q07923	191 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	NSL1	Q12143	216 aa		11.04	□□□□□ -0.64
SPT8	YLR055C	COX6	P00427	148 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	MSS18	P08593	268 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	MRPL32	P25348	183 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	CSM1	P25651	190 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	GOS1	P38736	223 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	PPE1	P38796	400 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	FHL1	P39521	936 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	OYE3	P41816	400 aa	Predicted RBP	11.03	□□□□□ -0.64
SPT8	YLR055C	YJL132W	P47014	750 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	YPL062W	Q02781	134 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	GCN5	Q03330	439 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	YEH2	Q07950	538 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	SLD7	Q08457	257 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	GYP1	Q08484	637 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	ESA1	Q08649	445 aa		11.03	□□□□□ -0.64
SPT8	YLR055C	CMR1	Q12510	522 aa	Known RBP	11.03	□□□□□ -0.64
SPT8	YLR055C	RHO1	P06780	209 aa	Known RBP	11.02	□□□□□ -0.64
SPT8	YLR055C	BUD23	P25627	275 aa	Predicted RBP	11.02	□□□□□ -0.64
SPT8	YLR055C	COQ8	P27697	501 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	SMI1	P32566	505 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	AIM26	P32858	118 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	YKR051W	P36142	418 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	YBR053C	P38235	358 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	BIT2	P38346	545 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	PEX28	P38848	579 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	AGP3	P43548	558 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	SWP82	P43554	623 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	IRC5	P43610	853 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	STB2	P46679	850 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	NOP19	P53317	196 aa	Predicted RBP	11.02	□□□□□ -0.64
SPT8	YLR055C	VPS9	P54787	451 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	HDA3	Q06623	655 aa		11.02	□□□□□ -0.64
SPT8	YLR055C	EFG1	Q3E705	233 aa	Known RBP	11.02	□□□□□ -0.64
SPT8	YLR055C	TPK2	P06245	380 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.02	□□□□□ -0.65	RIP-Chip
SPT8	YLR055C	PMA2	P19657	947 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	SSE2	P32590	693 aa	Known RBP	11.02	□□□□□ -0.65
SPT8	YLR055C	DSS4	P32601	143 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	BTT1	P40314	149 aa	Predicted RBP	11.02	□□□□□ -0.65
SPT8	YLR055C	MSS2	P40990	351 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	RMR1	P53060	241 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	HPT1	Q04178	221 aa	Known RBP	11.02	□□□□□ -0.65
SPT8	YLR055C	ECM22	Q05958	814 aa	Predicted RBP	11.02	□□□□□ -0.65
SPT8	YLR055C	GGA1	Q06336	557 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	YDL114W	Q07530	308 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	PSR1	Q07800	427 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	YLL054C	Q12244	843 aa		11.02	□□□□□ -0.65
SPT8	YLR055C	BRR1	Q99177	341 aa	Predicted RBP	11.02	□□□□□ -0.65
SPT8	YLR055C	BCY1	P07278	416 aa	Known RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	ERG20	P08524	352 aa	Known RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	HMG2	P12684	1045 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	KSS1	P14681	368 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	TEC1	P18412	486 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	ATP12	P22135	325 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	ITR2	P30606	609 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	DAL1	P32375	460 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	NTR2	P36118	322 aa	Predicted RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	CYC2	P38909	366 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	SEO1	P39709	593 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	MOB1	P40484	314 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	SEC28	P40509	296 aa	Known RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	VMA13	P41807	478 aa	Known RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	YGL176C	P46945	554 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	MNN11	P46985	422 aa	Known RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	PEX8	P53248	589 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	YNL033W	P53964	284 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	YNL019C	P53975	284 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	GPI17	Q04080	534 aa		11.01	□□□□□ -0.65
SPT8	YLR055C	SPG3	Q04398	127 aa	Predicted RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	SPE3	Q12074	293 aa	Known RBP	11.01	□□□□□ -0.65
SPT8	YLR055C	NMT1	P14743	455 aa		11	□□□□□ -0.65
SPT8	YLR055C	RVS161	P25343	265 aa	Known RBP	11	□□□□□ -0.65
SPT8	YLR055C	POL4	P25615	582 aa		11	□□□□□ -0.65
SPT8	YLR055C	BRF1	P29056	596 aa		11	□□□□□ -0.65
SPT8	YLR055C	NDI1	P32340	513 aa		11	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms