RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W YKR011CQ02209 353 aa2.37□□□□□ -2.03
NUP100YKL068W ASM4Q05166 528 aa2.37□□□□□ -2.03
NUP100YKL068W SMD2Q06217 110 aaKnown RBP2.37□□□□□ -2.03
NUP100YKL068W MDM36Q06820 579 aa2.37□□□□□ -2.03
NUP100YKL068W XYL2Q07993 356 aa2.37□□□□□ -2.03
NUP100YKL068W TPK2P06245 380 aa2.36□□□□□ -2.03
NUP100YKL068W ERS1P17261 260 aa2.36□□□□□ -2.03
NUP100YKL068W STE4P18851 423 aa2.36□□□□□ -2.03
NUP100YKL068W RPB4P20433 221 aaPredicted RBP2.36□□□□□ -2.03
NUP100YKL068W ARC19P33204 171 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W COY1P34237 679 aa2.36□□□□□ -2.03
NUP100YKL068W GPT2P36148 743 aa2.36□□□□□ -2.03
NUP100YKL068W STB5P38699 743 aa2.36□□□□□ -2.03
NUP100YKL068W SPT8P38915 602 aa2.36□□□□□ -2.03
NUP100YKL068W YDR089WP38966 869 aa2.36□□□□□ -2.03
NUP100YKL068W GIP2P40036 548 aa2.36□□□□□ -2.03
NUP100YKL068W ALD5P40047 520 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W LRO1P40345 661 aa2.36□□□□□ -2.03
NUP100YKL068W DSE4P53753 1117 aa2.36□□□□□ -2.03
NUP100YKL068W ATG21Q02887 496 aa2.36□□□□□ -2.03
NUP100YKL068W TMA16Q08687 178 aa2.36□□□□□ -2.03
NUP100YKL068W TRE1Q08919 783 aa2.36□□□□□ -2.03
NUP100YKL068W TCO89Q08921 799 aa2.36□□□□□ -2.03
NUP100YKL068W YLL058WQ12198 575 aa2.36□□□□□ -2.03
NUP100YKL068W YLL054CQ12244 843 aa2.36□□□□□ -2.03
NUP100YKL068W SUL2Q12325 893 aa2.36□□□□□ -2.03
NUP100YKL068W ATP2P00830 511 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W RPL1AP0CX43 217 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W RPL1BP0CX44 217 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W ARO3P14843 370 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W PDC5P16467 563 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W SNF5P18480 905 aa2.36□□□□□ -2.03
NUP100YKL068W PRP2P20095 876 aaPredicted RBP2.36□□□□□ -2.03
NUP100YKL068W IME1P21190 360 aa2.36□□□□□ -2.03
NUP100YKL068W TYE7P33122 291 aaPredicted RBP2.36□□□□□ -2.03
NUP100YKL068W SEF1P34228 1148 aa2.36□□□□□ -2.03
NUP100YKL068W CCL1P37366 393 aa2.36□□□□□ -2.03
NUP100YKL068W MAL33P38157 468 aa2.36□□□□□ -2.03
NUP100YKL068W COS111P38308 924 aa2.36□□□□□ -2.03
NUP100YKL068W AIM10P39965 576 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W TAM41P53230 385 aa2.36□□□□□ -2.03
NUP100YKL068W RHO5P53879 331 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W MRPL1Q04599 285 aa2.36□□□□□ -2.03
NUP100YKL068W ECM18Q04623 453 aa2.36□□□□□ -2.03
NUP100YKL068W TRI1Q05024 226 aa2.36□□□□□ -2.03
NUP100YKL068W KAP95Q06142 861 aaKnown RBP2.36□□□□□ -2.03
NUP100YKL068W YOR019WQ99248 730 aa2.36□□□□□ -2.03
NUP100YKL068W RNA1P11745 407 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W FPS1P23900 669 aa2.35□□□□□ -2.03
NUP100YKL068W SPS22P25380 463 aa2.35□□□□□ -2.03
NUP100YKL068W DPH5P32469 300 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W YKT6P36015 200 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W CAB3P36076 571 aa2.35□□□□□ -2.03
NUP100YKL068W THI2P38141 450 aa2.35□□□□□ -2.03
NUP100YKL068W APN2P38207 520 aa2.35□□□□□ -2.03
NUP100YKL068W MIP6P38760 659 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W WSS1P38838 269 aa2.35□□□□□ -2.03
NUP100YKL068W RPN3P40016 523 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W YIL108WP40483 696 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W ENP2P48234 707 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W TAF4P50105 388 aa2.35□□□□□ -2.03
NUP100YKL068W YGR111WP53265 400 aa2.35□□□□□ -2.03
NUP100YKL068W ADE12P80210 433 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W SMA1Q02651 245 aa2.35□□□□□ -2.03
NUP100YKL068W RCO1Q04779 684 aa2.35□□□□□ -2.03
NUP100YKL068W CRD1Q07560 283 aa2.35□□□□□ -2.03
NUP100YKL068W RCL1Q08096 367 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W DCI1Q08558 271 aa2.35□□□□□ -2.03
NUP100YKL068W BUD7Q08754 746 aa2.35□□□□□ -2.03
NUP100YKL068W VPS54Q12071 889 aa2.35□□□□□ -2.03
NUP100YKL068W UPC2Q12151 913 aa2.35□□□□□ -2.03
NUP100YKL068W MRPL23Q12487 163 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W GPM1P00950 247 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W GCD1P09032 578 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W ERG6P25087 383 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W GBP2P25555 427 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
NUP100YKL068W DOA4P32571 926 aa2.35□□□□□ -2.03
NUP100YKL068W SRB2P34162 210 aa2.35□□□□□ -2.03
NUP100YKL068W VID24P38263 362 aa2.35□□□□□ -2.03
NUP100YKL068W RRT2P38332 387 aa2.35□□□□□ -2.03
NUP100YKL068W YHL017WP38745 532 aa2.35□□□□□ -2.03
NUP100YKL068W REV7P38927 245 aa2.35□□□□□ -2.03
NUP100YKL068W YNL195CP40168 261 aa2.35□□□□□ -2.03
NUP100YKL068W ASG1P40467 964 aa2.35□□□□□ -2.03
NUP100YKL068W MET28P40573 187 aa2.35□□□□□ -2.03
NUP100YKL068W ROK1P45818 564 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W SCW11P53189 542 aa2.35□□□□□ -2.03
NUP100YKL068W PIB2P53191 635 aa2.35□□□□□ -2.03
NUP100YKL068W ARP5P53946 755 aa2.35□□□□□ -2.03
NUP100YKL068W RPA49Q01080 415 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W NGL2Q03264 515 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W PEX19Q07418 342 aa2.35□□□□□ -2.03
NUP100YKL068W UBX3Q12229 455 aa2.35□□□□□ -2.03
NUP100YKL068W RUD3Q12234 484 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W SPE4Q12455 300 aa2.35□□□□□ -2.03
NUP100YKL068W PMD1P32634 1753 aa2.35□□□□□ -2.03
NUP100YKL068W CAR2P07991 424 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W LPD1P09624 499 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W PET122P10355 254 aa2.35□□□□□ -2.03
NUP100YKL068W UNG1P12887 359 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms