RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W TAH18Q12181 623 aa2.41□□□□□ -2.02
MSL1YIR009W FUM1P08417 488 aaKnown RBP2.4□□□□□ -2.03
MSL1YIR009W GPA1P08539 472 aa2.4□□□□□ -2.03
MSL1YIR009W CDC16P09798 840 aa2.4□□□□□ -2.03
MSL1YIR009W NOP1P15646 327 aaKnown RBP2.4□□□□□ -2.03
MSL1YIR009W FUR1P18562 216 aaKnown RBP2.4□□□□□ -2.03
MSL1YIR009W PGS1P25578 521 aa2.4□□□□□ -2.03
MSL1YIR009W IMP2'P32351 346 aa2.4□□□□□ -2.03
MSL1YIR009W GCD7P32502 381 aaPredicted RBP2.4□□□□□ -2.03
MSL1YIR009W FRD1P32614 470 aaKnown RBP2.4□□□□□ -2.03
MSL1YIR009W KTR3P38130 404 aaPredicted RBP2.4□□□□□ -2.03
MSL1YIR009W EFM2P38347 419 aa2.4□□□□□ -2.03
MSL1YIR009W RIC1P40395 1056 aa2.4□□□□□ -2.03
MSL1YIR009W SRB7P47822 140 aa2.4□□□□□ -2.03
MSL1YIR009W PSP1P50896 841 aaKnown RBP2.4□□□□□ -2.03
MSL1YIR009W ESBP6P53918 673 aa2.4□□□□□ -2.03
MSL1YIR009W REG1Q00816 1014 aa2.4□□□□□ -2.03
MSL1YIR009W SPC19Q03954 165 aa2.4□□□□□ -2.03
MSL1YIR009W SWF1Q04629 336 aa2.4□□□□□ -2.03
MSL1YIR009W ECI1Q05871 280 aa2.4□□□□□ -2.03
MSL1YIR009W VIP1Q06685 1146 aaKnown RBP2.4□□□□□ -2.03
MSL1YIR009W SKM1Q12469 655 aa2.4□□□□□ -2.03
MSL1YIR009W HSH49Q99181 213 aaPredicted RBP2.4□□□□□ -2.03
MSL1YIR009W REV3P14284 1504 aa2.4□□□□□ -2.03
MSL1YIR009W ATP2P00830 511 aaKnown RBP2.39□□□□□ -2.03
MSL1YIR009W PET122P10355 254 aa2.39□□□□□ -2.03
MSL1YIR009W MRP7P12687 371 aa2.39□□□□□ -2.03
MSL1YIR009W MET8P15807 274 aa2.39□□□□□ -2.03
MSL1YIR009W YCR006CP25350 157 aa2.39□□□□□ -2.03
MSL1YIR009W NFU1P32860 256 aa2.39□□□□□ -2.03
MSL1YIR009W TFC3P34111 1160 aa2.39□□□□□ -2.03
MSL1YIR009W NPR3P38742 1146 aa2.39□□□□□ -2.03
MSL1YIR009W FSH1P38777 243 aaKnown RBP2.39□□□□□ -2.03
MSL1YIR009W BZZ1P38822 633 aa2.39□□□□□ -2.03
MSL1YIR009W FUN12P39730 1002 aaKnown RBP2.39□□□□□ -2.03
MSL1YIR009W NOP16P40007 231 aaKnown RBP2.39□□□□□ -2.03
MSL1YIR009W PHM8P40025 321 aa2.39□□□□□ -2.03
MSL1YIR009W YJR061WP40355 935 aa2.39□□□□□ -2.03
MSL1YIR009W UBX6P47049 396 aa2.39□□□□□ -2.03
MSL1YIR009W TAM41P53230 385 aa2.39□□□□□ -2.03
MSL1YIR009W BSC5P53755 489 aa2.39□□□□□ -2.03
MSL1YIR009W MRPL19P53875 158 aa2.39□□□□□ -2.03
MSL1YIR009W YMR254CQ04838 102 aa2.39□□□□□ -2.03
MSL1YIR009W MFB1Q04922 465 aa2.39□□□□□ -2.03
MSL1YIR009W GTB1Q04924 702 aa2.39□□□□□ -2.03
MSL1YIR009W HUA2Q12134 243 aa2.39□□□□□ -2.03
MSL1YIR009W RRG1Q12167 365 aaPredicted RBP2.39□□□□□ -2.03
MSL1YIR009W SUL2Q12325 893 aa2.39□□□□□ -2.03
MSL1YIR009W LTE1P07866 1435 aa2.39□□□□□ -2.03
MSL1YIR009W YER145C-AA0A023PYF4 145 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-LR1P0C2J4 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-FP0CX61 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-GR2P0CX62 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-CP25383 438 aa2.38□□□□□ -2.03
MSL1YIR009W CMK1P27466 446 aaKnown RBP2.38□□□□□ -2.03
MSL1YIR009W PEP3P27801 918 aa2.38□□□□□ -2.03
MSL1YIR009W SEC1P30619 724 aaKnown RBP2.38□□□□□ -2.03
MSL1YIR009W DNF1P32660 1571 aa2.38□□□□□ -2.03
MSL1YIR009W YOX1P34161 385 aa2.38□□□□□ -2.03
MSL1YIR009W NUP120P35729 1037 aa2.38□□□□□ -2.03
MSL1YIR009W LEU5P38702 357 aa2.38□□□□□ -2.03
MSL1YIR009W PSD1P39006 500 aa2.38□□□□□ -2.03
MSL1YIR009W IST3P40565 148 aaPredicted RBP2.38□□□□□ -2.03
MSL1YIR009W MSY1P48527 492 aa2.38□□□□□ -2.03
MSL1YIR009W RPT6Q01939 405 aaKnown RBP2.38□□□□□ -2.03
MSL1YIR009W YPL108WQ02872 168 aaPredicted RBP2.38□□□□□ -2.03
MSL1YIR009W TY2A-DR2Q03483 438 aa2.38□□□□□ -2.03
MSL1YIR009W SYF1Q04048 859 aaPredicted RBP2.38□□□□□ -2.03
MSL1YIR009W YKU80Q04437 629 aa2.38□□□□□ -2.03
MSL1YIR009W YDR109CQ04585 715 aa2.38□□□□□ -2.03
MSL1YIR009W YLR287CQ05881 355 aa2.38□□□□□ -2.03
MSL1YIR009W TFC6Q06339 672 aa2.38□□□□□ -2.03
MSL1YIR009W ENT4Q07872 247 aa2.38□□□□□ -2.03
MSL1YIR009W SDH5Q08230 162 aa2.38□□□□□ -2.03
MSL1YIR009W TMA16Q08687 178 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-BQ12260 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-OR2Q12293 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-DR1Q12392 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-OR1Q12439 438 aa2.38□□□□□ -2.03
MSL1YIR009W TY2A-DR3Q99303 438 aa2.38□□□□□ -2.03
MSL1YIR009W SUI3P09064 285 aaKnown RBP2.37□□□□□ -2.03
MSL1YIR009W HOM3P10869 527 aa2.37□□□□□ -2.03
MSL1YIR009W PCT1P13259 424 aa2.37□□□□□ -2.03
MSL1YIR009W URK1P27515 501 aa2.37□□□□□ -2.03
MSL1YIR009W BLI1P35727 113 aa2.37□□□□□ -2.03
MSL1YIR009W ESL2P36168 1195 aa2.37□□□□□ -2.03
MSL1YIR009W SDS24P38314 527 aa2.37□□□□□ -2.03
MSL1YIR009W BUD16P39988 312 aa2.37□□□□□ -2.03
MSL1YIR009W IMA1P53051 589 aa2.37□□□□□ -2.03
MSL1YIR009W DUO1P53168 247 aaKnown RBP2.37□□□□□ -2.03
MSL1YIR009W RSC1P53236 928 aa2.37□□□□□ -2.03
MSL1YIR009W RAD30Q04049 632 aa2.37□□□□□ -2.03
MSL1YIR009W YLR455WQ06188 304 aa2.37□□□□□ -2.03
MSL1YIR009W NBP2Q12163 236 aa2.37□□□□□ -2.03
MSL1YIR009W SNU66Q12420 587 aaPredicted RBP2.37□□□□□ -2.03
MSL1YIR009W RVB2Q12464 471 aaKnown RBP2.37□□□□□ -2.03
MSL1YIR009W YBR126W-AQ8TGU7 68 aa2.37□□□□□ -2.03
MSL1YIR009W SEM1O94742 89 aa2.36□□□□□ -2.03
MSL1YIR009W MET17P06106 444 aa2.36□□□□□ -2.03
MSL1YIR009W CBP1P07252 654 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms