RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W RTN1Q04947 295 aaKnown RBP5.65□□□□□ -1.5
VMA16YHR026W YOL087CQ99247 1116 aa5.65□□□□□ -1.5
VMA16YHR026W AI5_BETAQ9ZZX0 354 aa5.65□□□□□ -1.5
VMA16YHR026W TRA1P38811 3744 aa5.64□□□□□ -1.51
VMA16YHR026W COX3P00420 269 aa5.64□□□□□ -1.51
VMA16YHR026W IME1P21190 360 aa5.64□□□□□ -1.51
VMA16YHR026W ERG6P25087 383 aaKnown RBP5.64□□□□□ -1.51
VMA16YHR026W LRE1P25579 583 aaKnown RBP5.64□□□□□ -1.51
VMA16YHR026W ARE1P25628 610 aa5.64□□□□□ -1.51
VMA16YHR026W AAR2P32357 355 aaPredicted RBP5.64□□□□□ -1.51
VMA16YHR026W LOS1P33418 1100 aaPredicted RBP5.64□□□□□ -1.51
VMA16YHR026W OAF3P36023 863 aa5.64□□□□□ -1.51
VMA16YHR026W ECM13P38195 257 aa5.64□□□□□ -1.51
VMA16YHR026W CCT2P39076 527 aaKnown RBP5.64□□□□□ -1.51
VMA16YHR026W SMX2P40204 77 aaKnown RBP5.64□□□□□ -1.51
VMA16YHR026W LTP1P40347 161 aa5.64□□□□□ -1.51
VMA16YHR026W COQ5P49017 307 aa5.64□□□□□ -1.51
VMA16YHR026W HOP2P53187 214 aa5.64□□□□□ -1.51
VMA16YHR026W SHR3Q02774 210 aa5.64□□□□□ -1.51
VMA16YHR026W RSM24Q03976 319 aa5.64□□□□□ -1.51
VMA16YHR026W ABP140Q08641 628 aaKnown RBP5.64□□□□□ -1.51
VMA16YHR026W DDC1Q08949 612 aa5.64□□□□□ -1.51
VMA16YHR026W YIL046W-AQ3E7Z4 54 aa5.64□□□□□ -1.51
VMA16YHR026W BRR2P32639 2163 aaKnown RBP5.63□□□□□ -1.51
VMA16YHR026W CYC1P00044 109 aaPredicted RBP5.63□□□□□ -1.51
VMA16YHR026W ARG4P04076 463 aaPredicted RBP5.63□□□□□ -1.51
VMA16YHR026W PYC1P11154 1178 aaKnown RBP5.63□□□□□ -1.51
VMA16YHR026W CMP2P14747 604 aa5.63□□□□□ -1.51
VMA16YHR026W STE4P18851 423 aa5.63□□□□□ -1.51
VMA16YHR026W RRT12P25381 491 aa5.63□□□□□ -1.51
VMA16YHR026W YCR051WP25631 222 aa5.63□□□□□ -1.51
VMA16YHR026W CAP1P28495 268 aaKnown RBP5.63□□□□□ -1.51
VMA16YHR026W CDC11P32458 415 aa5.63□□□□□ -1.51
VMA16YHR026W MRPL40P36534 297 aa5.63□□□□□ -1.51
VMA16YHR026W YSW1P38280 609 aa5.63□□□□□ -1.51
VMA16YHR026W MSG5P38590 489 aa5.63□□□□□ -1.51
VMA16YHR026W ASG1P40467 964 aa5.63□□□□□ -1.51
VMA16YHR026W GUS1P46655 708 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
VMA16YHR026W URB2P47108 1174 aa5.63□□□□□ -1.51
VMA16YHR026W CPR6P53691 371 aaKnown RBP5.63□□□□□ -1.51
VMA16YHR026W NRM1P53718 249 aa5.63□□□□□ -1.51
VMA16YHR026W CEF1Q03654 590 aaPredicted RBP5.63□□□□□ -1.51
VMA16YHR026W SXM1Q04175 944 aaKnown RBP5.63□□□□□ -1.51
VMA16YHR026W XYL2Q07993 356 aa5.63□□□□□ -1.51
VMA16YHR026W CLP1Q08685 445 aaPredicted RBP5.63□□□□□ -1.51
VMA16YHR026W RIB2Q12362 591 aaKnown RBP5.63□□□□□ -1.51
VMA16YHR026W GAL4P04386 881 aa5.62□□□□□ -1.51
VMA16YHR026W RIP1P08067 215 aa5.62□□□□□ -1.51
VMA16YHR026W TUB3P09734 445 aaKnown RBP5.62□□□□□ -1.51
VMA16YHR026W YML002WP0CF17 737 aa5.62□□□□□ -1.51
VMA16YHR026W EST1P17214 699 aaPredicted RBP5.62□□□□□ -1.51
VMA16YHR026W ARF2P19146 181 aaKnown RBP5.62□□□□□ -1.51
VMA16YHR026W GAS1P22146 559 aaKnown RBP5.62□□□□□ -1.51
VMA16YHR026W VBA3P25594 458 aa5.62□□□□□ -1.51
VMA16YHR026W CBF2P32504 956 aa5.62□□□□□ -1.51
VMA16YHR026W YMC2P38087 329 aa5.62□□□□□ -1.51
VMA16YHR026W VHC1P38329 1120 aa5.62□□□□□ -1.51
VMA16YHR026W PCA1P38360 1216 aa5.62□□□□□ -1.51
VMA16YHR026W CRP1P38845 465 aaKnown RBP5.62□□□□□ -1.51
VMA16YHR026W YMR134WP40207 237 aa5.62□□□□□ -1.51
VMA16YHR026W UBP7P40453 1071 aa5.62□□□□□ -1.51
VMA16YHR026W DSN1P40568 576 aa5.62□□□□□ -1.51
VMA16YHR026W YJL049WP47048 450 aa5.62□□□□□ -1.51
VMA16YHR026W PUS2P53167 370 aa5.62□□□□□ -1.51
VMA16YHR026W AQR1P53943 586 aa5.62□□□□□ -1.51
VMA16YHR026W SRP1Q02821 542 aaKnown RBP5.62□□□□□ -1.51
VMA16YHR026W PIR3Q03180 325 aa5.62□□□□□ -1.51
VMA16YHR026W ROT1Q03691 256 aa5.62□□□□□ -1.51
VMA16YHR026W YMR206WQ03695 313 aa5.62□□□□□ -1.51
VMA16YHR026W USA1Q03714 838 aa5.62□□□□□ -1.51
VMA16YHR026W IVY1Q04934 453 aa5.62□□□□□ -1.51
VMA16YHR026W HRD3Q05787 833 aa5.62□□□□□ -1.51
VMA16YHR026W ECM38Q05902 660 aaPredicted RBP5.62□□□□□ -1.51
VMA16YHR026W YSH1Q06224 779 aaPredicted RBP5.62□□□□□ -1.51
VMA16YHR026W MDM38Q08179 573 aa5.62□□□□□ -1.51
VMA16YHR026W RPN8Q08723 338 aaKnown RBP5.62□□□□□ -1.51
VMA16YHR026W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VMA16YHR026W LCB4Q12246 624 aa5.62□□□□□ -1.51
VMA16YHR026W SUL2Q12325 893 aa5.62□□□□□ -1.51
VMA16YHR026W NCA2Q12374 616 aa5.62□□□□□ -1.51
VMA16YHR026W ECM3Q99252 613 aa5.62□□□□□ -1.51
VMA16YHR026W BI2P03873 423 aa5.61□□□□□ -1.51
VMA16YHR026W RPL1AP0CX43 217 aaKnown RBP5.61□□□□□ -1.51
VMA16YHR026W RPL1BP0CX44 217 aaKnown RBP5.61□□□□□ -1.51
VMA16YHR026W MRPL25P23369 157 aa5.61□□□□□ -1.51
VMA16YHR026W SAT4P25333 603 aaKnown RBP5.61□□□□□ -1.51
VMA16YHR026W CDC12P32468 407 aaKnown RBP5.61□□□□□ -1.51
VMA16YHR026W HBS1P32769 611 aaKnown RBP5.61□□□□□ -1.51
VMA16YHR026W YRO2P38079 344 aa5.61□□□□□ -1.51
VMA16YHR026W POP4P38336 279 aa5.61□□□□□ -1.51
VMA16YHR026W AIM23P47015 356 aa5.61□□□□□ -1.51
VMA16YHR026W ECL1P48235 211 aa5.61□□□□□ -1.51
VMA16YHR026W HLJ1P48353 224 aa5.61□□□□□ -1.51
VMA16YHR026W YML6P51998 286 aa5.61□□□□□ -1.51
VMA16YHR026W SUN4P53616 420 aa5.61□□□□□ -1.51
VMA16YHR026W MRPL22P53881 309 aa5.61□□□□□ -1.51
VMA16YHR026W UFO1Q04511 668 aa5.61□□□□□ -1.51
VMA16YHR026W YFT2Q06676 274 aa5.61□□□□□ -1.51
VMA16YHR026W CIR2Q08822 631 aa5.61□□□□□ -1.51
VMA16YHR026W BI3Q9ZZW7 517 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms