RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	PRE2	P30656	287 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	GCD7	P32502	381 aa	Predicted RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	MSN4	P33749	630 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	GLG1	P36143	616 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	SFB3	P38810	929 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	NUP60	P39705	539 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	SER3	P40054	469 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	YTA12	P40341	825 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	IAH1	P41734	238 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	IME4	P41833	600 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	HXT14	P42833	540 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	MPP6	P53725	186 aa	Predicted RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	PNG1	Q02890	363 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	CLU1	Q03690	1277 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	TPP1	Q03796	238 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	BOP2	Q06150	570 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	VTA1	Q06263	330 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	CUR1	Q06469	252 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	ULA1	Q12059	462 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	RAD61	Q99359	647 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	YLR278C	Q05854	1341 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	RPS9B	P05755	195 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	HIP1	P06775	603 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	SAC7	P17121	654 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	PRP2	P20095	876 aa	Predicted RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	NTH1	P32356	751 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	HXT3	P32466	567 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	RML2	P32611	393 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	COT1	P32798	439 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	YME2	P32843	850 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	WBP1	P33767	430 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	TAT1	P38085	619 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	PIH1	P38768	344 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	BZZ1	P38822	633 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	KEL1	P38853	1164 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	MLH1	P38920	769 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	SSO2	P39926	295 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	YFR018C	P43599	363 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	BIT61	P47041	543 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	TRF5	P48561	642 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	FMS1	P50264	508 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	INP52	P50942	1183 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	YGL036W	P53185	909 aa	Predicted RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	LSC2	P53312	427 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	RPN9	Q04062	393 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	RPC11	Q04307	110 aa	Predicted RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	PUS7	Q08647	676 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	SVS1	Q12254	260 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	LDB17	Q12342	491 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	PNO1	Q99216	274 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	UBA1	P22515	1024 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	YIH1	P25637	258 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	YBL055C	P34220	418 aa	Predicted RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	PHO11	P35842	467 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	MRPL4	P36517	319 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	MRPL37	P36532	105 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	PHO12	P38693	467 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	SAK1	P38990	1142 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	ELO3	P40319	345 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	AIM20	P40451	204 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	TED1	P40533	473 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	ULP2	P40537	1034 aa	Predicted RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	MAF1	P41910	395 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	LOC1	P43586	204 aa	Predicted RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	CTK2	P46962	323 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	CTR1	P49573	406 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	RRP46	P53256	223 aa	Predicted RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	TY1A-DR2	Q03964	440 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	YLR297W	Q05899	129 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	DIB1	Q06819	143 aa	Predicted RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	SGO1	Q08490	590 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	VPS63	O13549	108 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	PRB1	P09232	635 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	EMC1	P25574	760 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	HSP104	P31539	908 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	YME1	P32795	747 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	HCS1	P34243	683 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	ATP3	P38077	311 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	MSG5	P38590	489 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	CRG1	P38892	291 aa	RIP-Chip data	3.38	□□□□□ -1.87	not detected
CCM1	YGR150C	SEC31	P38968	1273 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	YNL195C	P40168	261 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	ALG5	P40350	334 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	CLA4	P48562	842 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	MCM6	P53091	1017 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	CGR1	P53188	120 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	EFM5	P53200	248 aa	Known RBP	3.38	□□□□□ -1.87
CCM1	YGR150C	MNT4	P53745	580 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	UFO1	Q04511	668 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	ECM7	Q06200	448 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	SLP1	Q12232	587 aa		3.38	□□□□□ -1.87
CCM1	YGR150C	STE2	D6VTK4	431 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	ARD1	P07347	238 aa	Predicted RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	ERG20	P08524	352 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	FPS1	P23900	669 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	MGM101	P32787	269 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	MAE1	P36013	669 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	TCD2	P36101	447 aa	Known RBP	3.37	□□□□□ -1.87
CCM1	YGR150C	PXL1	P36166	706 aa		3.37	□□□□□ -1.87
CCM1	YGR150C	PFF1	P38244	976 aa		3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms