RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W TFB1P32776 642 aa6.75□□□□□ -1.33
SNU71YGR013W ERC1P38767 581 aa6.75□□□□□ -1.33
SNU71YGR013W MAF1P41910 395 aa6.75□□□□□ -1.33
SNU71YGR013W LSB3P43603 459 aaKnown RBP6.75□□□□□ -1.33
SNU71YGR013W CTH1P47976 325 aa6.75□□□□□ -1.33
SNU71YGR013W SNF12P53628 566 aa6.75□□□□□ -1.33
SNU71YGR013W YAP6Q03935 383 aa6.75□□□□□ -1.33
SNU71YGR013W RQC1Q05468 723 aaKnown RBP6.75□□□□□ -1.33
SNU71YGR013W NPC2Q12408 173 aa6.75□□□□□ -1.33
SNU71YGR013W VMR1P38735 1592 aa6.75□□□□□ -1.33
SNU71YGR013W YBR085C-AO43137 85 aa6.75□□□□□ -1.33
SNU71YGR013W RPP2AP05319 106 aaKnown RBP6.75□□□□□ -1.33
SNU71YGR013W MSB1P21339 1137 aaKnown RBP6.75□□□□□ -1.33
SNU71YGR013W PMT1P33775 817 aa6.75□□□□□ -1.33
SNU71YGR013W YJL206CP39529 758 aa6.75□□□□□ -1.33
SNU71YGR013W ATF1P40353 525 aa6.75□□□□□ -1.33
SNU71YGR013W CTK2P46962 323 aa6.75□□□□□ -1.33
SNU71YGR013W IMO32P53219 342 aa6.75□□□□□ -1.33
SNU71YGR013W YNR068CP53754 272 aa6.75□□□□□ -1.33
SNU71YGR013W ROT1Q03691 256 aa6.75□□□□□ -1.33
SNU71YGR013W YDR239CQ03780 787 aa6.75□□□□□ -1.33
SNU71YGR013W SOV1Q04748 898 aa6.75□□□□□ -1.33
SNU71YGR013W HPF1Q05164 967 aa6.75□□□□□ -1.33
SNU71YGR013W YLR456WQ06199 204 aa6.75□□□□□ -1.33
SNU71YGR013W HMI1Q12039 706 aa6.75□□□□□ -1.33
SNU71YGR013W PSY3Q12318 242 aa6.75□□□□□ -1.33
SNU71YGR013W GAL80P04387 435 aa6.74□□□□□ -1.33
SNU71YGR013W SUI2P20459 304 aaKnown RBP6.74□□□□□ -1.33
SNU71YGR013W SPB1P25582 841 aaPredicted RBP6.74□□□□□ -1.33
SNU71YGR013W OTU2P38747 307 aaKnown RBP6.74□□□□□ -1.33
SNU71YGR013W YHR054CP38780 354 aa6.74□□□□□ -1.33
SNU71YGR013W FMO1P38866 432 aa6.74□□□□□ -1.33
SNU71YGR013W NUP60P39705 539 aa6.74□□□□□ -1.33
SNU71YGR013W RTT105P40063 208 aa6.74□□□□□ -1.33
SNU71YGR013W ADA2Q02336 434 aa6.74□□□□□ -1.33
SNU71YGR013W LUC7Q07508 261 aaPredicted RBP6.74□□□□□ -1.33
SNU71YGR013W GPN2Q08726 347 aaPredicted RBP6.74□□□□□ -1.33
SNU71YGR013W APL4Q12028 832 aa6.74□□□□□ -1.33
SNU71YGR013W CTF3Q12748 733 aa6.74□□□□□ -1.33
SNU71YGR013W ARD1P07347 238 aaPredicted RBP6.73□□□□□ -1.33
SNU71YGR013W PRP28P23394 588 aa6.73□□□□□ -1.33
SNU71YGR013W YIH1P25637 258 aa6.73□□□□□ -1.33
SNU71YGR013W MSP1P28737 362 aa6.73□□□□□ -1.33
SNU71YGR013W ADH5P38113 351 aaKnown RBP6.73□□□□□ -1.33
SNU71YGR013W MUP3P38734 546 aa6.73□□□□□ -1.33
SNU71YGR013W BAP3P41815 604 aa6.73□□□□□ -1.33
SNU71YGR013W CAK1P43568 368 aaPredicted RBP6.73□□□□□ -1.33
SNU71YGR013W PET130P47065 347 aa6.73□□□□□ -1.33
SNU71YGR013W HST1P53685 503 aa6.73□□□□□ -1.33
SNU71YGR013W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
SNU71YGR013W USO1P25386 1790 aa6.73□□□□□ -1.33
SNU71YGR013W CDC6P09119 513 aa6.73□□□□□ -1.33
SNU71YGR013W EMC1P25574 760 aa6.73□□□□□ -1.33
SNU71YGR013W CMC1P36064 111 aa6.73□□□□□ -1.33
SNU71YGR013W USA1Q03714 838 aa6.73□□□□□ -1.33
SNU71YGR013W ATG23Q06671 453 aa6.73□□□□□ -1.33
SNU71YGR013W CDC45Q08032 650 aa6.73□□□□□ -1.33
SNU71YGR013W TY1B-NL2Q99337 1749 aaKnown RBP6.72□□□□□ -1.33
SNU71YGR013W EST1P17214 699 aaPredicted RBP6.72□□□□□ -1.33
SNU71YGR013W SNT1P25357 1226 aa6.72□□□□□ -1.33
SNU71YGR013W RIB7P33312 244 aa6.72□□□□□ -1.33
SNU71YGR013W CTR1P49573 406 aa6.72□□□□□ -1.33
SNU71YGR013W TIM11P81449 96 aaPredicted RBP6.72□□□□□ -1.33
SNU71YGR013W INA17Q02888 182 aa6.72□□□□□ -1.33
SNU71YGR013W YDL073WQ07454 984 aa6.72□□□□□ -1.33
SNU71YGR013W FRE5Q08908 694 aa6.72□□□□□ -1.33
SNU71YGR013W CHS5Q12114 671 aaKnown RBP6.72□□□□□ -1.33
SNU71YGR013W AVL9Q12500 764 aa6.72□□□□□ -1.33
SNU71YGR013W RFA2P26754 273 aaKnown RBP6.71□□□□□ -1.34
SNU71YGR013W DAD2P36162 133 aa6.71□□□□□ -1.34
SNU71YGR013W PIG2P40187 538 aa6.71□□□□□ -1.34
SNU71YGR013W FKH2P41813 862 aa6.71□□□□□ -1.34
SNU71YGR013W CCT7P42943 550 aaKnown RBP6.71□□□□□ -1.34
SNU71YGR013W DLD2P46681 530 aaKnown RBP6.71□□□□□ -1.34
SNU71YGR013W TWF1P53250 332 aa6.71□□□□□ -1.34
SNU71YGR013W PRO2P54885 456 aaKnown RBP6.71□□□□□ -1.34
SNU71YGR013W BUD22Q04347 519 aaKnown RBP6.71□□□□□ -1.34
SNU71YGR013W PML1Q07930 204 aaPredicted RBP6.71□□□□□ -1.34
SNU71YGR013W MLH2Q07980 695 aa6.71□□□□□ -1.34
SNU71YGR013W PLP2Q12017 286 aa6.71□□□□□ -1.34
SNU71YGR013W YDL176WQ12027 708 aa6.71□□□□□ -1.34
SNU71YGR013W YBR255C-AQ3E776 120 aa6.71□□□□□ -1.34
SNU71YGR013W YML002WP0CF17 737 aa6.7□□□□□ -1.34
SNU71YGR013W RPL1AP0CX43 217 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W RPL1BP0CX44 217 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W BUD14P27637 709 aa6.7□□□□□ -1.34
SNU71YGR013W PPQ1P32945 549 aa6.7□□□□□ -1.34
SNU71YGR013W WBP1P33767 430 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W MRPL7P36519 292 aa6.7□□□□□ -1.34
SNU71YGR013W THI2P38141 450 aa6.7□□□□□ -1.34
SNU71YGR013W MCX1P38323 520 aaPredicted RBP6.7□□□□□ -1.34
SNU71YGR013W ARO9P38840 513 aaPredicted RBP6.7□□□□□ -1.34
SNU71YGR013W REV7P38927 245 aa6.7□□□□□ -1.34
SNU71YGR013W STR3P53101 465 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W KAP120Q02932 1032 aa6.7□□□□□ -1.34
SNU71YGR013W RBS1Q05672 457 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W GCN2P15442 1659 aa6.7□□□□□ -1.34
SNU71YGR013W PDR5P33302 1511 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W PDB1P32473 366 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W YEL043WP32618 956 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms