RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	RFX1	P48743	811 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	GPI8	P49018	411 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	RNR4	P49723	345 aa	Known RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	ARC35	P53731	342 aa	Known RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	CWC25	P53854	179 aa	Known RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	CNM67	P53865	581 aa	Known RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	TMA20	P89886	181 aa	Predicted RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	ECM9	Q02202	377 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	YMR210W	Q03649	449 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	USA1	Q03714	838 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	EMI2	Q04409	500 aa	Known RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	COX20	Q04935	205 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	FMP42	Q04991	504 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	ENT2	Q05785	613 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	SMD2	Q06217	110 aa	Known RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	VPS36	Q06696	566 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	YTM1	Q12024	460 aa	Predicted RBP	3.47	□□□□□ -1.85
ECO1	YFR027W	YBL111C	Q3E7Y5	667 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	APM4	Q99186	491 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	YOR093C	Q12275	1648 aa		3.47	□□□□□ -1.85
ECO1	YFR027W	NTE1	Q04958	1679 aa		3.46	□□□□□ -1.85
ECO1	YFR027W	CYB2	P00175	591 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	IPP1	P00817	287 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	CPA2	P03965	1118 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	ILS1	P09436	1072 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	LPD1	P09624	499 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	KSS1	P14681	368 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	GFA1	P14742	717 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	STF2	P16965	84 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	PMA2	P19657	947 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	URA4	P20051	364 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	CKI1	P20485	582 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	REC107	P21651	314 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	KIN82	P25341	720 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	OCA4	P25366	362 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	DMC1	P25453	334 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	RDS1	P25611	832 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	MEI4	P29467	408 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	SRB4	P32569	687 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	PTR2	P32901	601 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	XRS2	P33301	854 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	VPS21	P36017	210 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	YAP3	P38749	330 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	RRF1	P38771	230 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	LSM12	P38828	187 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	SMF1	P38925	575 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	OAF1	P39720	1047 aa	Predicted RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	TIF4631	P39935	952 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	JLP2	P40206	208 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	MEP1	P40260	492 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	PDS1	P40316	373 aa	Predicted RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	CAB2	P40506	365 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	MNT3	P40549	630 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	PAC11	P40960	533 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	MNN11	P46985	422 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	YJL055W	P47044	245 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	CTR1	P49573	406 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	IMD3	P50095	523 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	MRM2	P53123	320 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	VPS73	P53142	486 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	IMP4	P53941	290 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	RPM2	Q02773	1202 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	RCR2	Q03446	210 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	YDR179W-A	Q03983	463 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	TMA64	Q04600	565 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	PHM6	Q05637	104 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	ATG38	Q05789	226 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	ARV1	Q06541	321 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	OSW1	Q08692	278 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	CTI6	Q08923	506 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	HFI1	Q12060	488 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	USV1	Q12132	391 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	TIP41	Q12199	356 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	ERP4	Q12450	207 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	RTP1	Q12751	981 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	RSF2	P46974	1380 aa		3.46	□□□□□ -1.86
ECO1	YFR027W	CHC1	P22137	1653 aa	Known RBP	3.46	□□□□□ -1.86
ECO1	YFR027W	TUS1	Q06412	1307 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	VTH1	P40438	1549 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	VTH2	P40890	1549 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	RPL6B	P05739	176 aa	Known RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	PIF1	P07271	859 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	RPS19A	P07280	144 aa	Known RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	RPS19B	P07281	144 aa	Predicted RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	HNM1	P19807	563 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	VPS3	P23643	1011 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	MCM3	P24279	971 aa	Known RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	RRP43	P25359	394 aa	Predicted RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	FEN2	P25621	512 aa	Known RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	TPS2	P31688	896 aa	Known RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	YME1	P32795	747 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	TFC4	P33339	1025 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	PXA2	P34230	853 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	OAF3	P36023	863 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	GLG1	P36143	616 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	LAS1	P36146	502 aa	Predicted RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	CCL1	P37366	393 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	MAK5	P38112	773 aa	Predicted RBP	3.45	□□□□□ -1.86
ECO1	YFR027W	MAL33	P38157	468 aa		3.45	□□□□□ -1.86
ECO1	YFR027W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.45	□□□□□ -1.86	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms