RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C DSF2P38213 736 aa10.8□□□□□ -0.68
SPC25YER018C GDH3P39708 457 aa10.8□□□□□ -0.68
SPC25YER018C RPH1P39956 796 aa10.8□□□□□ -0.68
SPC25YER018C RPL34BP40525 121 aaKnown RBP10.8□□□□□ -0.68
SPC25YER018C IME4P41833 600 aa10.8□□□□□ -0.68
SPC25YER018C TEL2P53038 688 aa10.8□□□□□ -0.68
SPC25YER018C FRE4P53746 719 aa10.8□□□□□ -0.68
SPC25YER018C YDR131CQ03899 556 aa10.8□□□□□ -0.68
SPC25YER018C RPB4P20433 221 aaPredicted RBP10.79□□□□□ -0.68
SPC25YER018C SPS19P32573 292 aaKnown RBP10.79□□□□□ -0.68
SPC25YER018C CSE1P33307 960 aa10.79□□□□□ -0.68
SPC25YER018C DCW1P36091 449 aa10.79□□□□□ -0.68
SPC25YER018C STN1P38960 494 aa10.79□□□□□ -0.68
SPC25YER018C MAD3P47074 515 aa10.79□□□□□ -0.68
SPC25YER018C NPY1P53164 384 aa10.79□□□□□ -0.68
SPC25YER018C YNL058CP53947 316 aa10.79□□□□□ -0.68
SPC25YER018C SPP2Q02521 185 aa10.79□□□□□ -0.68
SPC25YER018C NHP10Q03435 203 aa10.79□□□□□ -0.68
SPC25YER018C TAF12Q03761 539 aa10.79□□□□□ -0.68
SPC25YER018C CIA1Q05583 330 aa10.79□□□□□ -0.68
SPC25YER018C VTA1Q06263 330 aa10.79□□□□□ -0.68
SPC25YER018C YPR084WQ06821 456 aa10.79□□□□□ -0.68
SPC25YER018C MDY2Q12285 212 aa10.79□□□□□ -0.68
SPC25YER018C APA1P16550 321 aaKnown RBP10.78□□□□□ -0.68
SPC25YER018C BAS1P22035 811 aa10.78□□□□□ -0.68
SPC25YER018C DEP1P31385 405 aa10.78□□□□□ -0.68
SPC25YER018C HSM3P38348 480 aa10.78□□□□□ -0.68
SPC25YER018C PPX1P38698 397 aa10.78□□□□□ -0.68
SPC25YER018C EFM1P38732 585 aa10.78□□□□□ -0.68
SPC25YER018C PCL5P38794 229 aa10.78□□□□□ -0.68
SPC25YER018C MRX1P40050 688 aa10.78□□□□□ -0.68
SPC25YER018C AXL1P40851 1208 aa10.78□□□□□ -0.68
SPC25YER018C ARC1P46672 376 aaKnown RBP10.78□□□□□ -0.68
SPC25YER018C SWC4P53201 476 aa10.78□□□□□ -0.68
SPC25YER018C AQR1P53943 586 aa10.78□□□□□ -0.68
SPC25YER018C RPC11Q04307 110 aaPredicted RBP10.78□□□□□ -0.68
SPC25YER018C SEC10Q06245 871 aa10.78□□□□□ -0.68
SPC25YER018C NOB1Q08444 459 aaKnown RBP10.78□□□□□ -0.68
SPC25YER018C BUD7Q08754 746 aa10.78□□□□□ -0.68
SPC25YER018C STB3Q12427 513 aa10.78□□□□□ -0.68
SPC25YER018C PTM1P32857 523 aa10.77□□□□□ -0.69
SPC25YER018C PTH2P34222 208 aa10.77□□□□□ -0.69
SPC25YER018C MUP3P38734 546 aa10.77□□□□□ -0.69
SPC25YER018C PRM2P40534 656 aa10.77□□□□□ -0.69
SPC25YER018C PET130P47065 347 aa10.77□□□□□ -0.69
SPC25YER018C YML119WQ03208 357 aa10.77□□□□□ -0.69
SPC25YER018C TMA46Q12000 345 aaKnown RBP10.77□□□□□ -0.69
SPC25YER018C ICT1Q12385 394 aa10.77□□□□□ -0.69
SPC25YER018C YPR089WO13585 888 aa10.76□□□□□ -0.69
SPC25YER018C SEM1O94742 89 aa10.76□□□□□ -0.69
SPC25YER018C SNT1P25357 1226 aa10.76□□□□□ -0.69
SPC25YER018C PMT1P33775 817 aa10.76□□□□□ -0.69
SPC25YER018C SPT23P35210 1082 aa10.76□□□□□ -0.69
SPC25YER018C HEK2P38199 381 aaKnown RBP RIP-Chip data10.76□□□□□ -0.69 RIP-Chip
SPC25YER018C YHR078WP38799 552 aa10.76□□□□□ -0.69
SPC25YER018C SHU2P38957 223 aa10.76□□□□□ -0.69
SPC25YER018C TIM17P39515 158 aa10.76□□□□□ -0.69
SPC25YER018C UBP6P43593 499 aaKnown RBP10.76□□□□□ -0.69
SPC25YER018C LSB3P43603 459 aaKnown RBP10.76□□□□□ -0.69
SPC25YER018C SET2P46995 733 aaKnown RBP10.76□□□□□ -0.69
SPC25YER018C AIF1P52923 378 aa10.76□□□□□ -0.69
SPC25YER018C CLD1P53264 445 aa10.76□□□□□ -0.69
SPC25YER018C SMA1Q02651 245 aa10.76□□□□□ -0.69
SPC25YER018C TVP15Q03860 143 aa10.76□□□□□ -0.69
SPC25YER018C BLS1Q06071 122 aa10.76□□□□□ -0.69
SPC25YER018C ALR1Q08269 859 aa10.76□□□□□ -0.69
SPC25YER018C UPC2Q12151 913 aa10.76□□□□□ -0.69
SPC25YER018C YPT6Q99260 215 aa10.76□□□□□ -0.69
SPC25YER018C RHO2P06781 192 aa10.75□□□□□ -0.69
SPC25YER018C HSC82P15108 705 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C GAL11P19659 1081 aa10.75□□□□□ -0.69
SPC25YER018C VAN1P23642 535 aa10.75□□□□□ -0.69
SPC25YER018C YCR090CP25654 182 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C SEC31P38968 1273 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C NNF1P47149 201 aa10.75□□□□□ -0.69
SPC25YER018C FAA4P47912 694 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C RNR4P49723 345 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C MRM2P53123 320 aa10.75□□□□□ -0.69
SPC25YER018C YNR014WP53719 212 aa10.75□□□□□ -0.69
SPC25YER018C TDA7P53882 636 aaPredicted RBP10.75□□□□□ -0.69
SPC25YER018C SUB1P54000 292 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C VPS16Q03308 798 aa10.75□□□□□ -0.69
SPC25YER018C GOT1Q03554 138 aa10.75□□□□□ -0.69
SPC25YER018C CLU1Q03690 1277 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C SPO20Q04359 397 aa10.75□□□□□ -0.69
SPC25YER018C SSL1Q04673 461 aaPredicted RBP10.75□□□□□ -0.69
SPC25YER018C YPL247CQ12523 523 aa10.75□□□□□ -0.69
SPC25YER018C MEX67Q99257 599 aaKnown RBP10.75□□□□□ -0.69
SPC25YER018C HEM2P05373 342 aa10.74□□□□□ -0.69
SPC25YER018C ART10P18634 518 aaKnown RBP10.74□□□□□ -0.69
SPC25YER018C EPT1P22140 391 aa10.74□□□□□ -0.69
SPC25YER018C SEC15P22224 910 aa10.74□□□□□ -0.69
SPC25YER018C NPP1P25353 742 aa10.74□□□□□ -0.69
SPC25YER018C ARP1P38696 384 aa10.74□□□□□ -0.69
SPC25YER018C UTP9P38882 575 aaKnown RBP10.74□□□□□ -0.69
SPC25YER018C GCD14P46959 383 aaPredicted RBP10.74□□□□□ -0.69
SPC25YER018C NUP84P52891 726 aa10.74□□□□□ -0.69
SPC25YER018C RMI1Q02685 241 aa10.74□□□□□ -0.69
SPC25YER018C RCO1Q04779 684 aa10.74□□□□□ -0.69
SPC25YER018C ENT4Q07872 247 aa10.74□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 111.3 ms