RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	NTR2	P36118	322 aa	Predicted RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	MTG2	P38860	518 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	POP2	P39008	433 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	VMA13	P41807	478 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	THI6	P41835	540 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	IRC8	P47046	822 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	PET130	P47065	347 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	IMD4	P50094	524 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	OGG1	P53397	376 aa	Predicted RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	ADE16	P54113	591 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	PRP42	Q03776	544 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	BUD22	Q04347	519 aa	Known RBP	2.93	□□□□□ -1.94
TFB1	YDR311W	YOL159C	Q08300	171 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	YPL191C	Q08930	360 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	FRE6	Q12473	712 aa		2.93	□□□□□ -1.94
TFB1	YDR311W	AAC1	P04710	309 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	SYN8	P31377	255 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	MGM1	P32266	881 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	GDA1	P32621	518 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	TIF3	P34167	436 aa	Known RBP	2.92	□□□□□ -1.94
TFB1	YDR311W	CMC1	P36064	111 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	PPS1	P38148	807 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	MPP10	P47083	593 aa	Known RBP	2.92	□□□□□ -1.94
TFB1	YDR311W	STR3	P53101	465 aa	Known RBP	2.92	□□□□□ -1.94
TFB1	YDR311W	RBS1	Q05672	457 aa	Known RBP	2.92	□□□□□ -1.94
TFB1	YDR311W	YLR040C	Q07988	224 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	KEL3	Q08979	651 aa	Predicted RBP	2.92	□□□□□ -1.94
TFB1	YDR311W	RLM1	Q12224	676 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	SGS1	P35187	1447 aa		2.92	□□□□□ -1.94
TFB1	YDR311W	PMA1	P05030	918 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	CHO2	P05374	869 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	MRP13	P12686	339 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
TFB1	YDR311W	RNR3	P21672	869 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	VMA16	P23968	213 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	TRM2	P33753	639 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	RPF2	P36160	344 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	AGP2	P38090	596 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	YNG2	P38806	282 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	PMT6	P42934	759 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	UBX6	P47049	396 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	MDE1	P47095	244 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	ATG4	P53867	494 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	IPI3	P53877	555 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	RIA1	P53893	1110 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	MAK10	Q02197	733 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	RNT1	Q02555	471 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	YPL107W	Q02873	248 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	RSM28	Q03430	361 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	RQC1	Q05468	723 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	TGS1	Q12052	315 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	SPE3	Q12074	293 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	BAG7	Q12128	409 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	LCB4	Q12246	624 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	NTO1	Q12311	748 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	AVL9	Q12500	764 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	PDA1	P16387	420 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	CPR2	P23285	205 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	HCM1	P25364	564 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
TFB1	YDR311W	LAC1	P28496	418 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	BRF1	P29056	596 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	PAP1	P29468	568 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	MRE11	P32829	692 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	AAP1	P37898	856 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	OTU2	P38747	307 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	MAM1	P40065	302 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	MEP1	P40260	492 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
TFB1	YDR311W	SAE2	P46946	345 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	YJL055W	P47044	245 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	GPI8	P49018	411 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	TWF1	P53250	332 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	DCP2	P53550	970 aa	Known RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	RAD33	Q04231	177 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	RSF1	Q05043	376 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	MMR1	Q06324	491 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	FMP40	Q08968	688 aa	Predicted RBP	2.91	□□□□□ -1.94
TFB1	YDR311W	PUS9	Q12069	462 aa		2.91	□□□□□ -1.94
TFB1	YDR311W	PPR1	P07272	904 aa	Predicted RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	RPL3	P14126	387 aa	Known RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	TRX1	P22217	103 aa	Known RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	SNT1	P25357	1226 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	SSE2	P32590	693 aa	Known RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	LOT5	P34234	306 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	LAS1	P36146	502 aa	Predicted RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	THI2	P38141	450 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	SUL1	P38359	859 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	SEC31	P38968	1273 aa	Known RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	SAP1	P39955	897 aa	Known RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	YFR020W	P43600	232 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	VID30	P53076	958 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	HOS2	P53096	452 aa	Predicted RBP	2.9	□□□□□ -1.95
TFB1	YDR311W	CUL3	P53202	744 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	SLI1	P53304	468 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	SOV1	Q04748	898 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	PCL8	Q08966	492 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	ATG9	Q12142	997 aa		2.9	□□□□□ -1.95
TFB1	YDR311W	TPK2	P06245	380 aa		2.89	□□□□□ -1.95
TFB1	YDR311W	PET111	P08468	800 aa		2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms