RNA–Protein interactions for RNA: YDR025W

RPS11A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11A, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11A	YDR025W	PXL1	P36166	706 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	STB5	P38699	743 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	RTS1	P38903	757 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	CAJ1	P39101	391 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	BUD16	P39988	312 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	ICP55	P40051	511 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	YIL077C	P40508	320 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	TMA22	P47089	198 aa	Predicted RBP	4.36	□□□□□ -1.71
RPS11A	YDR025W	KEL2	P50090	882 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	TIM10	P87108	93 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	VPS64	Q03944	604 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	TAF11	Q04226	346 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	DCS1	Q06151	350 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	MCP2	Q06567	569 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	ARR3	Q06598	404 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	AIM6	Q07716	390 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	SCM3	Q12334	223 aa		4.36	□□□□□ -1.71
RPS11A	YDR025W	HSH49	Q99181	213 aa	Predicted RBP	4.36	□□□□□ -1.71
RPS11A	YDR025W	SSK22	P25390	1331 aa	Predicted RBP	4.36	□□□□□ -1.71
RPS11A	YDR025W	JIP3	O13555	125 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	REP1	P03871	373 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	TPK1	P06244	397 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	SEN2	P16658	377 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	VPS33	P20795	691 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	VPS1	P21576	704 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	RRP43	P25359	394 aa	Predicted RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	YCR015C	P25616	317 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	RPS7A	P26786	190 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	RPC34	P32910	317 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	ARC19	P33204	171 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	UTP11	P34247	250 aa	Predicted RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	FZO1	P38297	855 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	YBR225W	P38321	900 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	PEX18	P38855	283 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	NPR2	P39923	615 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	YER130C	P39959	443 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	TPA1	P40032	644 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	TMN3	P40071	706 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	LRO1	P40345	661 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	YJR061W	P40355	935 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	TFG2	P41896	400 aa	Predicted RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	STB2	P46679	850 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	FYV8	P46949	817 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	COS12	P53053	380 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	PRP43	P53131	767 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	ARE2	P53629	642 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	RTC4	P53850	401 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	VPS75	P53853	264 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	MRPL22	P53881	309 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	CIK1	Q01649	594 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	SPC24	Q04477	213 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	YLR287C	Q05881	355 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	NOP6	Q07623	225 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	CLP1	Q08685	445 aa	Predicted RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	OSW1	Q08692	278 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	MSH5	Q12175	901 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	HSP42	Q12329	375 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	IES3	Q12345	250 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	BUD3	P25558	1636 aa		4.35	□□□□□ -1.71
RPS11A	YDR025W	URB1	P34241	1764 aa	Known RBP	4.35	□□□□□ -1.71
RPS11A	YDR025W	HOM3	P10869	527 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	LAT1	P12695	482 aa	Known RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	OLE1	P21147	510 aa	Known RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	CAD1	P24813	409 aa	Known RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	RDS1	P25611	832 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	BUD23	P25627	275 aa	Predicted RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	PRE2	P30656	287 aa	Known RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
RPS11A	YDR025W	MRE11	P32829	692 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	NIP100	P33420	868 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	BLI1	P35727	113 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	SPP381	P38282	291 aa	Predicted RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	FMO1	P38866	432 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	LAM5	P43560	674 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	RMD8	P43620	662 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	YPT11	P48559	417 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	RFX1	P48743	811 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	BSC5	P53755	489 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	CSL4	P53859	292 aa	Predicted RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	ALF1	P53904	254 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	PNG1	Q02890	363 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	SYF1	Q04048	859 aa	Predicted RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	UTP21	Q06078	939 aa	Predicted RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	APC5	Q08683	685 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	RKM1	Q08961	583 aa	Predicted RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	RIO1	Q12196	484 aa	Known RBP	4.34	□□□□□ -1.71
RPS11A	YDR025W	LAS17	Q12446	633 aa		4.34	□□□□□ -1.71
RPS11A	YDR025W	PGK1	P00560	416 aa	Known RBP	4.33	□□□□□ -1.72
RPS11A	YDR025W	CPA2	P03965	1118 aa	Known RBP	4.33	□□□□□ -1.72
RPS11A	YDR025W	CTT1	P06115	562 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	PDE2	P06776	526 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	YML002W	P0CF17	737 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	SEC12	P11655	471 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	SPO16	P17122	198 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	KGD2	P19262	463 aa	Predicted RBP	4.33	□□□□□ -1.72
RPS11A	YDR025W	PHO13	P19881	312 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	MRPL25	P23369	157 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	SGF29	P25554	259 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	PGS1	P25578	521 aa		4.33	□□□□□ -1.72
RPS11A	YDR025W	ACP1	P32463	125 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms