RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	SGF29	P25554	259 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	ICL1	P28240	557 aa	Predicted RBP	4.21	□□□□□ -1.74
HCM1	YCR065W	MEI4	P29467	408 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	GCS1	P35197	352 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	YMR262W	P38430	313 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	AXL2	P38928	823 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	NDC80	P40460	691 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	YIL089W	P40500	205 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	SMK1	P41808	388 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	THI6	P41835	540 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	PFA3	P42836	336 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	GZF3	P42944	551 aa	Known RBP	4.21	□□□□□ -1.74
HCM1	YCR065W	URB2	P47108	1174 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	YGL242C	P53066	181 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	SLD3	P53135	668 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	OGG1	P53397	376 aa	Predicted RBP	4.21	□□□□□ -1.74
HCM1	YCR065W	ASI2	P53895	289 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	SAM50	P53969	484 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	MOT3	P54785	490 aa	Known RBP	4.21	□□□□□ -1.74
HCM1	YCR065W	RNT1	Q02555	471 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	GIM5	Q04493	163 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	AIM32	Q04689	311 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	GFD1	Q04839	188 aa	Known RBP	4.21	□□□□□ -1.74
HCM1	YCR065W	MSC3	Q05812	728 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	YLR456W	Q06199	204 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	HIM1	Q06674	414 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	GUP2	Q08929	609 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	HOS1	Q12214	470 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	MED4	Q12343	284 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	ARP7	Q12406	477 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	GIS3	Q12418	502 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	YLR149C	Q99296	730 aa		4.21	□□□□□ -1.74
HCM1	YCR065W	TPK1	P06244	397 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	MET3	P08536	511 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	UNG1	P12887	359 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	APE1	P14904	514 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	YCR016W	P25617	290 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	ERG1	P32476	496 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	HOG1	P32485	435 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	SRB2	P34162	210 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	ATP3	P38077	311 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	CHK1	P38147	527 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	HSL7	P38274	827 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	CBR1	P38626	284 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	OSH3	P38713	996 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	DUN1	P39009	513 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	VMA10	P48836	114 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	UBC9	P50623	157 aa	Predicted RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	CBK1	P53894	756 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	TEP1	P53916	434 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	ERG5	P54781	538 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	RLI1	Q03195	608 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	RSN1	Q03516	953 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	PDR8	Q06149	701 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	YLR455W	Q06188	304 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	CMS1	Q07897	291 aa	Known RBP	4.2	□□□□□ -1.74
HCM1	YCR065W	TGS1	Q12052	315 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	NTO1	Q12311	748 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	LDB17	Q12342	491 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	SWM1	Q12379	170 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	PCD1	Q12524	340 aa		4.2	□□□□□ -1.74
HCM1	YCR065W	LEU2	P04173	364 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	RAD3	P06839	778 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	FUM1	P08417	488 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	COX11	P19516	300 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	CLB3	P24870	427 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	VPH2	P32341	215 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SUA5	P32579	426 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	COT1	P32798	439 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SSO1	P32867	290 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	UBC6	P33296	250 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	OCT1	P35999	772 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	TPO5	P36029	618 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	YKR051W	P36142	418 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	ADE17	P38009	592 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	YHR097C	P38809	366 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	ALG5	P40350	334 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	LOH1	P47055	219 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SSN8	P47821	323 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	KAP114	P53067	1004 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	ARC35	P53731	342 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	VID22	Q05934	901 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	YLR413W	Q06689	675 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	PEX15	Q08215	383 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	ENB1	Q08299	606 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	TRM13	Q12383	476 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	GRX6	Q12438	231 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	THO2	P53552	1597 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	ECM5	Q03214	1411 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	HXK2	P04807	486 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	YML002W	P0CF17	737 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	MTF2	P10849	440 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	YAK1	P14680	807 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SEC63	P14906	663 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	PRP16	P15938	1071 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	NCP1	P16603	691 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	ISY1	P21374	235 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	PRE8	P23639	250 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	MSP1	P28737	362 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	FRD1	P32614	470 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms