RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W CCE1Q03702 353 aa5.84□□□□□ -1.47
SHP1YBL058W GSF2Q04697 403 aaKnown RBP5.84□□□□□ -1.47
SHP1YBL058W VID22Q05934 901 aa5.84□□□□□ -1.47
SHP1YBL058W YLR001CQ07895 862 aa5.84□□□□□ -1.47
SHP1YBL058W BSC6Q08280 497 aa5.84□□□□□ -1.47
SHP1YBL058W NRT1Q08485 598 aa5.84□□□□□ -1.47
SHP1YBL058W PFA4Q12006 378 aa5.84□□□□□ -1.47
SHP1YBL058W FRE7Q12333 620 aa5.84□□□□□ -1.47
SHP1YBL058W TUB3P09734 445 aaKnown RBP5.83□□□□□ -1.48
SHP1YBL058W PMS1P14242 873 aa5.83□□□□□ -1.48
SHP1YBL058W MRPL9P31334 269 aa5.83□□□□□ -1.48
SHP1YBL058W ARA1P38115 344 aa5.83□□□□□ -1.48
SHP1YBL058W RKM3P38222 552 aa5.83□□□□□ -1.48
SHP1YBL058W DIA4P38705 446 aaPredicted RBP5.83□□□□□ -1.48
SHP1YBL058W DED81P38707 554 aaKnown RBP5.83□□□□□ -1.48
SHP1YBL058W DBP8P38719 431 aa5.83□□□□□ -1.48
SHP1YBL058W ARG2P40360 574 aa5.83□□□□□ -1.48
SHP1YBL058W SSU1P41930 458 aa5.83□□□□□ -1.48
SHP1YBL058W ALK1P43633 760 aaKnown RBP5.83□□□□□ -1.48
SHP1YBL058W NUP100Q02629 959 aa5.83□□□□□ -1.48
SHP1YBL058W VHS1Q03785 461 aa5.83□□□□□ -1.48
SHP1YBL058W ARX1Q03862 593 aaKnown RBP5.83□□□□□ -1.48
SHP1YBL058W MCP2Q06567 569 aa5.83□□□□□ -1.48
SHP1YBL058W YLL056CQ12177 298 aa5.83□□□□□ -1.48
SHP1YBL058W YDR018CQ12185 396 aa5.83□□□□□ -1.48
SHP1YBL058W MDM35O60200 86 aa5.82□□□□□ -1.48
SHP1YBL058W CPA1P07258 411 aaKnown RBP5.82□□□□□ -1.48
SHP1YBL058W SWI5P08153 709 aa5.82□□□□□ -1.48
SHP1YBL058W YSP3P25036 478 aa5.82□□□□□ -1.48
SHP1YBL058W RRP43P25359 394 aaPredicted RBP5.82□□□□□ -1.48
SHP1YBL058W MSH1P25846 959 aa5.82□□□□□ -1.48
SHP1YBL058W NTH1P32356 751 aa5.82□□□□□ -1.48
SHP1YBL058W CDC13P32797 924 aaKnown RBP5.82□□□□□ -1.48
SHP1YBL058W CTF13P35203 478 aa5.82□□□□□ -1.48
SHP1YBL058W RGI2P40188 164 aa5.82□□□□□ -1.48
SHP1YBL058W IRR1P40541 1150 aa5.82□□□□□ -1.48
SHP1YBL058W SPG5P42933 373 aa5.82□□□□□ -1.48
SHP1YBL058W YML6P51998 286 aa5.82□□□□□ -1.48
SHP1YBL058W RLI1Q03195 608 aaKnown RBP5.82□□□□□ -1.48
SHP1YBL058W SOV1Q04748 898 aa5.82□□□□□ -1.48
SHP1YBL058W ENT2Q05785 613 aa5.82□□□□□ -1.48
SHP1YBL058W YOL024WQ08172 172 aa5.82□□□□□ -1.48
SHP1YBL058W BUD7Q08754 746 aa5.82□□□□□ -1.48
SHP1YBL058W APL4Q12028 832 aa5.82□□□□□ -1.48
SHP1YBL058W YDR262WQ12331 272 aa5.82□□□□□ -1.48
SHP1YBL058W PDC5P16467 563 aaKnown RBP5.81□□□□□ -1.48
SHP1YBL058W CYM1P32898 989 aa5.81□□□□□ -1.48
SHP1YBL058W ARL1P38116 183 aaKnown RBP5.81□□□□□ -1.48
SHP1YBL058W GND1P38720 489 aaKnown RBP5.81□□□□□ -1.48
SHP1YBL058W YHR219WP38900 624 aa5.81□□□□□ -1.48
SHP1YBL058W FAU1P40099 211 aa5.81□□□□□ -1.48
SHP1YBL058W ALA1P40825 983 aaKnown RBP5.81□□□□□ -1.48
SHP1YBL058W RHO3Q00245 231 aaKnown RBP5.81□□□□□ -1.48
SHP1YBL058W UTP5Q04177 643 aaKnown RBP5.81□□□□□ -1.48
SHP1YBL058W SSL1Q04673 461 aaPredicted RBP5.81□□□□□ -1.48
SHP1YBL058W RCO1Q04779 684 aa5.81□□□□□ -1.48
SHP1YBL058W ESC2Q06340 456 aa5.81□□□□□ -1.48
SHP1YBL058W GUP2Q08929 609 aa5.81□□□□□ -1.48
SHP1YBL058W DAS2Q12084 232 aa5.81□□□□□ -1.48
SHP1YBL058W GLE1Q12315 538 aa5.81□□□□□ -1.48
SHP1YBL058W GPR1Q12361 961 aa5.81□□□□□ -1.48
SHP1YBL058W YLR462WO13556 202 aa5.8□□□□□ -1.48
SHP1YBL058W MSB1P21339 1137 aaKnown RBP5.8□□□□□ -1.48
SHP1YBL058W YSR3P23501 404 aa5.8□□□□□ -1.48
SHP1YBL058W RAD57P25301 460 aa5.8□□□□□ -1.48
SHP1YBL058W YCR006CP25350 157 aa5.8□□□□□ -1.48
SHP1YBL058W HEM3P28789 327 aa5.8□□□□□ -1.48
SHP1YBL058W IMP3P32899 183 aaPredicted RBP5.8□□□□□ -1.48
SHP1YBL058W YHL049CP38722 271 aa5.8□□□□□ -1.48
SHP1YBL058W BOL3P39724 118 aa5.8□□□□□ -1.48
SHP1YBL058W LSM5P40089 93 aaKnown RBP5.8□□□□□ -1.48
SHP1YBL058W QDR1P40475 563 aa5.8□□□□□ -1.48
SHP1YBL058W YFL064CP43540 174 aa5.8□□□□□ -1.48
SHP1YBL058W KAP114P53067 1004 aa5.8□□□□□ -1.48
SHP1YBL058W ECM9Q02202 377 aa5.8□□□□□ -1.48
SHP1YBL058W HED1Q03937 162 aa5.8□□□□□ -1.48
SHP1YBL058W SIZ1Q04195 904 aa5.8□□□□□ -1.48
SHP1YBL058W RRN11Q04712 507 aa5.8□□□□□ -1.48
SHP1YBL058W FAP7Q12055 197 aaPredicted RBP5.8□□□□□ -1.48
SHP1YBL058W LDB17Q12342 491 aa5.8□□□□□ -1.48
SHP1YBL058W PNS1Q12412 539 aa5.8□□□□□ -1.48
SHP1YBL058W YBL111CQ3E7Y5 667 aa5.8□□□□□ -1.48
SHP1YBL058W SEM1O94742 89 aa5.79□□□□□ -1.48
SHP1YBL058W IPP1P00817 287 aaKnown RBP5.79□□□□□ -1.48
SHP1YBL058W VPS34P22543 875 aa5.79□□□□□ -1.48
SHP1YBL058W LDB16P25587 256 aa5.79□□□□□ -1.48
SHP1YBL058W HOG1P32485 435 aa5.79□□□□□ -1.48
SHP1YBL058W MPE1P35728 441 aaKnown RBP5.79□□□□□ -1.48
SHP1YBL058W MIC60P36112 540 aa5.79□□□□□ -1.48
SHP1YBL058W LDB7P38210 180 aa5.79□□□□□ -1.48
SHP1YBL058W YHL008CP38750 627 aa5.79□□□□□ -1.48
SHP1YBL058W CKB2P38930 258 aa5.79□□□□□ -1.48
SHP1YBL058W LYS1P38998 373 aaRIP-Chip data5.79□□□□□ -1.48not detected
SHP1YBL058W YEL073CP39974 107 aa5.79□□□□□ -1.48
SHP1YBL058W LCP5P40079 357 aaPredicted RBP5.79□□□□□ -1.48
SHP1YBL058W LRO1P40345 661 aa5.79□□□□□ -1.48
SHP1YBL058W YJL107CP42947 387 aa5.79□□□□□ -1.48
SHP1YBL058W HLJ1P48353 224 aa5.79□□□□□ -1.48
SHP1YBL058W ZRG17P53735 605 aa5.79□□□□□ -1.48
SHP1YBL058W EFM6P53970 246 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms