RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SOGA3Q5TF21 947 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 NLGN1Q8N2Q7 840 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
SCAF11-209ENST00000547018 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
SCAF11-209ENST00000547018 PFKFB3Q16875 520 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-209ENST00000547018 TMEM60Q9H2L4 133 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.47□□□□□ -0.09
SCAF11-209ENST00000547018 SMCO2A6NFE2 343 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 GDF11O95390 407 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 SRGNP10124 158 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 ADKP55263 362 aaKnown RBP14.47□□□□□ -0.09
SCAF11-209ENST00000547018 MAD2L2Q9UI95 211 aa14.47□□□□□ -0.09
SCAF11-209ENST00000547018 TNNI2P48788 182 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 AOC3Q16853 763 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 RRAGBQ5VZM2 374 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
SCAF11-209ENST00000547018 C21orf2O43822 256 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 CAVIN2O95810 425 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 UBA7P41226 1012 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 RHBDL3P58872 404 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 NCAPHQ15003 741 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 SBK1Q52WX2 424 aa14.46□□□□□ -0.09
SCAF11-209ENST00000547018 CACNA1SQ13698 1873 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 CLRN2A0PK11 232 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 TXKP42681 527 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 RBM6P78332 1123 aaKnown RBP14.46□□□□□ -0.1
SCAF11-209ENST00000547018 NPY5RQ15761 445 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 CRY2Q49AN0 593 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 SLC27A3Q5K4L6 730 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 SPICE1Q8N0Z3 855 aa14.46□□□□□ -0.1
SCAF11-209ENST00000547018 CHD4Q14839 1912 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCAF11-209ENST00000547018 TOP1P11387 765 aaKnown RBP14.45□□□□□ -0.1
SCAF11-209ENST00000547018 STAT6P42226 847 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 CUL4BQ13620 913 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 ZYXQ15942 572 aaKnown RBP14.45□□□□□ -0.1
SCAF11-209ENST00000547018 UBE2SQ16763 222 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 GPR75-ASB3A0A0A6YYF3 556 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-209ENST00000547018 NUP88Q99567 741 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-209ENST00000547018 CTNND2Q9UQB3 1225 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 ATP6V0A2Q9Y487 856 aa14.45□□□□□ -0.1
SCAF11-209ENST00000547018 RAD17O75943 681 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 TECP42680 631 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 EZH2Q15910 746 aaKnown RBP14.44□□□□□ -0.1
SCAF11-209ENST00000547018 DGKHQ86XP1 1220 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 PAGE5Q96GU1 130 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 ZNF287Q9HBT7 754 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 MKRN1Q9UHC7 482 aaKnown RBP14.44□□□□□ -0.1
SCAF11-209ENST00000547018 H0YIN7 160 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 TPM3P06753 285 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 PDE4CQ08493 712 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 IL17AQ16552 155 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 RRP36Q96EU6 259 aaKnown RBP14.44□□□□□ -0.1
SCAF11-209ENST00000547018 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 TDRD3Q9H7E2 651 aaKnown RBP14.44□□□□□ -0.1
SCAF11-209ENST00000547018 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 WNK3Q9BYP7 1800 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 DTHD1Q6ZMT9 781 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 TRMT1LQ7Z2T5 733 aaKnown RBP14.44□□□□□ -0.1
SCAF11-209ENST00000547018 DEFB132Q7Z7B7 95 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 HPS3Q969F9 1004 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 GDAQ9Y2T3 454 aa14.44□□□□□ -0.1
SCAF11-209ENST00000547018 LRP5O75197 1615 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 TNRC6CQ9HCJ0 1690 aaKnown RBP14.43□□□□□ -0.1
SCAF11-209ENST00000547018 ACTN4O43707 911 aaKnown RBP14.43□□□□□ -0.1
SCAF11-209ENST00000547018 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 PPP2R5BQ15173 497 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 CDC42EP5Q6NZY7 148 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 ARMCX5Q6P1M9 558 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 SLF2Q8IX21 1173 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 SP8Q8IXZ3 490 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 TEKT1Q969V4 418 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 VPS16Q9H269 839 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 PCDHA4Q9UN74 947 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 ONECUT3O60422 494 aaPredicted RBP14.43□□□□□ -0.1
SCAF11-209ENST00000547018 CD44P16070 742 aaKnown RBP14.43□□□□□ -0.1
SCAF11-209ENST00000547018 PLCG2P16885 1265 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 RBM26Q5T8P6 1007 aaKnown RBP14.43□□□□□ -0.1
SCAF11-209ENST00000547018 TBC1D22AQ8WUA7 517 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 CCDC34Q96HJ3 373 aa14.43□□□□□ -0.1
SCAF11-209ENST00000547018 MYH6P13533 1939 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 TCP10L2B9ZVM9 353 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 IL1R1P14778 569 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 PTPN14Q15678 1187 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 USH1GQ495M9 461 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 TUBE1Q9UJT0 475 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 NPR1P16066 1061 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 CALML3P27482 149 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 TXLNAP40222 546 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 PPP4CP60510 307 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 GRM4Q14833 912 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 VEZTQ9HBM0 779 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 POLD4Q9HCU8 107 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-209ENST00000547018 ZBTB12Q9Y330 459 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-209ENST00000547018 IRS2Q9Y4H2 1338 aa14.42□□□□□ -0.1
SCAF11-209ENST00000547018 TEX33O43247 280 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms