RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 MINDY4BA8MYZ0 360 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 PF4P02776 101 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 LIG1P18858 919 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 NOS3P29474 1203 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 GBP2P32456 591 aaPredicted RBP6.94□□□□□ -1.3
PRKCB-206ENST00000482000 CHRNA4P43681 627 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 RACK1P63244 317 aaKnown RBP6.94□□□□□ -1.3
PRKCB-206ENST00000482000 LMNB2Q03252 620 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 R3HDM1Q15032 1099 aaKnown RBP6.94□□□□□ -1.3
PRKCB-206ENST00000482000 KIF4BQ2VIQ3 1234 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 Q6ZS46 218 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 TOM1L2Q6ZVM7 507 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 NT5DC4Q86YG4 428 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 TRIM42Q8IWZ5 723 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 AGGF1Q8N302 714 aaeCLIP6.94□□□□□ -1.3
PRKCB-206ENST00000482000 KCNH5Q8NCM2 988 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 SMG8Q8ND04 991 aaKnown RBP6.94□□□□□ -1.3
PRKCB-206ENST00000482000 WFDC12Q8WWY7 111 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 TESK2Q96S53 571 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 SUGCTQ9HAC7 445 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 KCNQ5Q9NR82 932 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 BTAF1O14981 1849 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 A0A1W2PP64 1363 aa6.94□□□□□ -1.3
PRKCB-206ENST00000482000 MYOM1P52179 1685 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 BCL9O00512 1426 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 SHANK3Q9BYB0 1731 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 KIF20BQ96Q89 1820 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 AOC2O75106 756 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 GARTP22102 1010 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 PTPN11Q06124 597 aaPredicted RBP6.93□□□□□ -1.3
PRKCB-206ENST00000482000 RAD51AP2Q09MP3 1159 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 CAMK2GQ13555 558 aaPredicted RBP6.93□□□□□ -1.3
PRKCB-206ENST00000482000 PDE3AQ14432 1141 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 ZNF394Q53GI3 561 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 PTF1AQ7RTS3 328 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 USP48Q86UV5 1035 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 NME9Q86XW9 330 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRKCB-206ENST00000482000 GPBAR1Q8TDU6 330 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 GAL3ST3Q96A11 431 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 SLC12A5Q9H2X9 1139 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
PRKCB-206ENST00000482000 GDF11O95390 407 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 ITGB2P05107 769 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
PRKCB-206ENST00000482000 IREB2P48200 963 aaKnown RBP6.92□□□□□ -1.3
PRKCB-206ENST00000482000 DDB1Q16531 1140 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
PRKCB-206ENST00000482000 MARCH10Q8NA82 808 aaPredicted RBP6.92□□□□□ -1.3
PRKCB-206ENST00000482000 PUS7Q96PZ0 661 aaKnown RBP6.92□□□□□ -1.3
PRKCB-206ENST00000482000 MIR1-1HGQ9H1L0 117 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 CYP4F12Q9HCS2 524 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 PCDHGC5Q9Y5F6 944 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 CCDC7Q96M83 1385 aa6.92□□□□□ -1.3
PRKCB-206ENST00000482000 ST20-MTHFSA0A0A6YYL1 179 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 TIAF1O95411 115 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 SLFN14P0C7P3 912 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 FBXL19Q6PCT2 694 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 TXNRD3Q86VQ6 643 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 DZIP1LQ8IYY4 767 aaKnown RBP6.91□□□□□ -1.3
PRKCB-206ENST00000482000 TMEM151AQ8N4L1 468 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 RAD18Q9NS91 495 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 ADAMTS1Q9UHI8 967 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 PCDHGB7Q9Y5F8 929 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 NINLQ9Y2I6 1382 aa6.91□□□□□ -1.3
PRKCB-206ENST00000482000 PAPPAQ13219 1627 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 TUBGCP6Q96RT7 1819 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 FAM221AA4D161 298 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 PLSCR1O15162 318 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 GREM1O60565 184 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 LMNB1P20700 586 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 FAM160A1Q05DH4 1040 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 SOX4Q06945 474 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 SEPT6Q14141 434 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 PLA2G4EQ3MJ16 856 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 ZC3H12AQ5D1E8 599 aaKnown RBP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 ANKRD34AQ69YU3 496 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 HDGFL2Q7Z4V5 671 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 ZNF296Q8WUU4 475 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 UBL7Q96S82 380 aaPredicted RBP6.9□□□□□ -1.3
PRKCB-206ENST00000482000 TGIF2Q9GZN2 237 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 PCDHA4Q9UN74 947 aa6.9□□□□□ -1.3
PRKCB-206ENST00000482000 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.31
PRKCB-206ENST00000482000 ADH5P11766 374 aa6.89□□□□□ -1.31
PRKCB-206ENST00000482000 DRD2P14416 443 aa6.89□□□□□ -1.31
PRKCB-206ENST00000482000 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-206ENST00000482000 FDX2Q6P4F2 183 aa6.89□□□□□ -1.31
PRKCB-206ENST00000482000 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-206ENST00000482000 BNC2Q6ZN30 1099 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-206ENST00000482000 GOLM1Q8NBJ4 401 aa6.89□□□□□ -1.31
PRKCB-206ENST00000482000 GATAD2BQ8WXI9 593 aa6.89□□□□□ -1.31
PRKCB-206ENST00000482000 JARID2Q92833 1246 aaPredicted RBP6.89□□□□□ -1.31
PRKCB-206ENST00000482000 ACSBG1Q96GR2 724 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms